RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 G3V3Q6 166 aa10.31□□□□□ -0.76
SSBP4-214ENST00000607020 BOLA2-SMG1P6H3BVE0 249 aa10.31□□□□□ -0.76
SSBP4-214ENST00000607020 IFNA5P01569 189 aa10.31□□□□□ -0.76
SSBP4-214ENST00000607020 LINC00315P59091 139 aa10.31□□□□□ -0.76
SSBP4-214ENST00000607020 C10orf113Q5VZT2 155 aa10.31□□□□□ -0.76
SSBP4-214ENST00000607020 LINC00305Q7Z4B0 112 aa10.31□□□□□ -0.76
SSBP4-214ENST00000607020 OR1L4Q8NGR5 311 aa10.31□□□□□ -0.76
SSBP4-214ENST00000607020 RNASE8Q8TDE3 154 aaKnown RBP10.31□□□□□ -0.76
SSBP4-214ENST00000607020 WFDC1Q9HC57 220 aa10.31□□□□□ -0.76
SSBP4-214ENST00000607020 KCNIP2Q9NS61 270 aa10.31□□□□□ -0.76
SSBP4-214ENST00000607020 RNF24Q9Y225 148 aa10.31□□□□□ -0.76
SSBP4-214ENST00000607020 TRAV12-2A0A075B6T6 113 aa10.3□□□□□ -0.76
SSBP4-214ENST00000607020 RPL7P18124 248 aaKnown RBP10.3□□□□□ -0.76
SSBP4-214ENST00000607020 OR5I1Q13606 314 aa10.3□□□□□ -0.76
SSBP4-214ENST00000607020 Q6ZNX1 250 aa10.3□□□□□ -0.76
SSBP4-214ENST00000607020 INO80EQ8NBZ0 244 aaPredicted RBP10.3□□□□□ -0.76
SSBP4-214ENST00000607020 PFDN5Q99471 154 aa10.3□□□□□ -0.76
SSBP4-214ENST00000607020 PARD6GQ9BYG4 376 aaPredicted RBP10.3□□□□□ -0.76
SSBP4-214ENST00000607020 DNAJC4Q9NNZ3 241 aa10.3□□□□□ -0.76
SSBP4-214ENST00000607020 NOP10Q9NPE3 64 aaKnown RBP10.3□□□□□ -0.76
SSBP4-214ENST00000607020 TNFSF18Q9UNG2 199 aa10.3□□□□□ -0.76
SSBP4-214ENST00000607020 VPS13BQ7Z7G8 4022 aa10.3□□□□□ -0.76
SSBP4-214ENST00000607020 RNF222A6NCQ9 220 aa10.29□□□□□ -0.76
SSBP4-214ENST00000607020 C17orf112F2Z3M2 114 aa10.29□□□□□ -0.76
SSBP4-214ENST00000607020 EREGO14944 169 aa10.29□□□□□ -0.76
SSBP4-214ENST00000607020 SCGB1C1Q8TD33 95 aa10.29□□□□□ -0.76
SSBP4-214ENST00000607020 TMEM263Q8WUH6 116 aaKnown RBP10.29□□□□□ -0.76
SSBP4-214ENST00000607020 C18orf15Q96N68 181 aa10.29□□□□□ -0.76
SSBP4-214ENST00000607020 SMLR1H3BR10 107 aa10.28□□□□□ -0.76
SSBP4-214ENST00000607020 GCSAMLQ5JQS6 135 aa10.28□□□□□ -0.76
SSBP4-214ENST00000607020 MORN5Q5VZ52 161 aa10.28□□□□□ -0.76
SSBP4-214ENST00000607020 A0A0J9YY99 117 aa10.27□□□□□ -0.77
SSBP4-214ENST00000607020 H7BYZ3 331 aa10.27□□□□□ -0.77
SSBP4-214ENST00000607020 MRPS12O15235 138 aaKnown RBP10.27□□□□□ -0.77
SSBP4-214ENST00000607020 HOXA5P20719 270 aa10.27□□□□□ -0.77
SSBP4-214ENST00000607020 KRTAP10-1P60331 282 aa10.27□□□□□ -0.77
SSBP4-214ENST00000607020 ERVFC1-1P60608 527 aa10.27□□□□□ -0.77
SSBP4-214ENST00000607020 ZNF266Q14584 549 aa10.27□□□□□ -0.77
SSBP4-214ENST00000607020 IGFL4Q6B9Z1 124 aa10.27□□□□□ -0.77
SSBP4-214ENST00000607020 BPIFA4PQ86YQ2 179 aa10.27□□□□□ -0.77
SSBP4-214ENST00000607020 RNF182Q8N6D2 247 aa10.27□□□□□ -0.77
SSBP4-214ENST00000607020 OR8A1Q8NGG7 326 aa10.27□□□□□ -0.77
SSBP4-214ENST00000607020 C20orf144Q9BQM9 153 aa10.27□□□□□ -0.77
SSBP4-214ENST00000607020 A0A087X0K7 114 aa10.26□□□□□ -0.77
SSBP4-214ENST00000607020 ARPC5O15511 151 aa10.26□□□□□ -0.77
SSBP4-214ENST00000607020 HTN1P15515 57 aa10.26□□□□□ -0.77
SSBP4-214ENST00000607020 ZNF738Q8NE65 137 aa10.26□□□□□ -0.77
SSBP4-214ENST00000607020 TRAV5A0A0B4J249 113 aa10.25□□□□□ -0.77
SSBP4-214ENST00000607020 FAM229AH3BQW9 127 aa10.25□□□□□ -0.77
SSBP4-214ENST00000607020 CDKN1BP46527 198 aa10.25□□□□□ -0.77
SSBP4-214ENST00000607020 RHOBP62745 196 aa10.25□□□□□ -0.77
SSBP4-214ENST00000607020 ICAM4Q14773 271 aa10.25□□□□□ -0.77
SSBP4-214ENST00000607020 FFAR4Q5NUL3 377 aa10.25□□□□□ -0.77
SSBP4-214ENST00000607020 TIMM9Q9Y5J7 89 aa10.25□□□□□ -0.77
SSBP4-214ENST00000607020 A0A096LPF7 62 aa10.24□□□□□ -0.77
SSBP4-214ENST00000607020 SIVA1O15304 175 aa10.24□□□□□ -0.77
SSBP4-214ENST00000607020 IGLC2P0DOY2 106 aa10.24□□□□□ -0.77
SSBP4-214ENST00000607020 CXCL2P19875 107 aa10.24□□□□□ -0.77
SSBP4-214ENST00000607020 FUSP35637 526 aaKnown RBP eCLIP10.24□□□□□ -0.772e-6■■■□□ 17
SSBP4-214ENST00000607020 HIST1H1AQ02539 215 aaPredicted RBP10.24□□□□□ -0.77
SSBP4-214ENST00000607020 PSG3Q16557 428 aa10.24□□□□□ -0.77
SSBP4-214ENST00000607020 PPP1R14DQ9NXH3 145 aa10.24□□□□□ -0.77
SSBP4-214ENST00000607020 MDFICQ9P1T7 246 aa10.24□□□□□ -0.77
SSBP4-214ENST00000607020 A0A087WTM6 91 aa10.23□□□□□ -0.77
SSBP4-214ENST00000607020 SMR3BP02814 79 aaPredicted RBP10.23□□□□□ -0.77
SSBP4-214ENST00000607020 LCN15Q6UWW0 184 aa10.23□□□□□ -0.77
SSBP4-214ENST00000607020 NFE4Q86UQ8 179 aa10.23□□□□□ -0.77
SSBP4-214ENST00000607020 CCDC28AQ8IWP9 274 aa10.23□□□□□ -0.77
SSBP4-214ENST00000607020 HSD17B11Q8NBQ5 300 aa10.23□□□□□ -0.77
SSBP4-214ENST00000607020 OR11H4Q8NGC9 324 aa10.23□□□□□ -0.77
SSBP4-214ENST00000607020 VSIG2Q96IQ7 327 aa10.23□□□□□ -0.77
SSBP4-214ENST00000607020 ST6GAL2Q96JF0 529 aa10.23□□□□□ -0.77
SSBP4-214ENST00000607020 MRPL32Q9BYC8 188 aaKnown RBP10.23□□□□□ -0.77
SSBP4-214ENST00000607020 TMEM14CQ9P0S9 112 aa10.23□□□□□ -0.77
SSBP4-214ENST00000607020 FUT9Q9Y231 359 aa10.23□□□□□ -0.77
SSBP4-214ENST00000607020 GAGE12BA1L429 117 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 HMSDA8MTL9 139 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 H3BQ15 152 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 J3QL48 77 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 GAGE7O76087 117 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 SNRPCP09234 159 aaKnown RBP10.22□□□□□ -0.77
SSBP4-214ENST00000607020 GAGE12FP0CL80 117 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 GAGE12GP0CL81 117 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 GAGE12IP0CL82 117 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 ATP6V0CP27449 155 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 DAZ2Q13117 558 aaKnown RBP10.22□□□□□ -0.77
SSBP4-214ENST00000607020 ZNF345Q14585 488 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 GUK1Q16774 197 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 RPL7L1Q6DKI1 246 aaKnown RBP10.22□□□□□ -0.77
SSBP4-214ENST00000607020 MIR17HGQ75NE6 70 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 OR2G3Q8NGZ4 309 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 LRRC20Q8TCA0 184 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 FAM167A-AS1Q96KT0 104 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 PSMG3Q9BT73 122 aaPredicted RBP10.22□□□□□ -0.77
SSBP4-214ENST00000607020 SLC25A2Q9BXI2 301 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 UBR4Q5T4S7 5183 aa10.22□□□□□ -0.77
SSBP4-214ENST00000607020 hCG_2014768A0A024R1R8 64 aa10.21□□□□□ -0.77
SSBP4-214ENST00000607020 BORCS7-ASMTA0A0B4J1R7 106 aa10.21□□□□□ -0.77
SSBP4-214ENST00000607020 H3BTX0 84 aa10.21□□□□□ -0.77
SSBP4-214ENST00000607020 TAAR5O14804 337 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms