RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 RBAKDNA6NC62 111 aa13.72□□□□□ -0.21
SRSF4-206ENST00000605204 ZNF705GA8MUZ8 300 aaPredicted RBP13.72□□□□□ -0.21
SRSF4-206ENST00000605204 IGLL5B9A064 214 aa13.72□□□□□ -0.21
SRSF4-206ENST00000605204 TAAR5O14804 337 aa13.72□□□□□ -0.21
SRSF4-206ENST00000605204 ATP6V0CP27449 155 aa13.72□□□□□ -0.21
SRSF4-206ENST00000605204 FAM122CQ6P4D5 195 aa13.72□□□□□ -0.21
SRSF4-206ENST00000605204 RXFP4Q8TDU9 374 aa13.72□□□□□ -0.21
SRSF4-206ENST00000605204 TMEM263Q8WUH6 116 aaKnown RBP13.72□□□□□ -0.21
SRSF4-206ENST00000605204 LY6G6CO95867 125 aa13.71□□□□□ -0.21
SRSF4-206ENST00000605204 CDC34P49427 236 aaPredicted RBP13.71□□□□□ -0.21
SRSF4-206ENST00000605204 RAB2AP61019 212 aa13.71□□□□□ -0.21
SRSF4-206ENST00000605204 RANP62826 216 aaKnown RBP13.71□□□□□ -0.21
SRSF4-206ENST00000605204 CCDC28AQ8IWP9 274 aa13.71□□□□□ -0.21
SRSF4-206ENST00000605204 ARL6IP6Q8N6S5 226 aa13.71□□□□□ -0.21
SRSF4-206ENST00000605204 PYGO2Q9BRQ0 406 aa13.71□□□□□ -0.21
SRSF4-206ENST00000605204 Q9H3A6 140 aa13.71□□□□□ -0.21
SRSF4-206ENST00000605204 KLLNB2CW77 178 aa13.71□□□□□ -0.22
SRSF4-206ENST00000605204 CRISP2P16562 243 aa13.71□□□□□ -0.22
SRSF4-206ENST00000605204 DAD1P61803 113 aa13.71□□□□□ -0.22
SRSF4-206ENST00000605204 FAM19A4Q96LR4 140 aa13.71□□□□□ -0.22
SRSF4-206ENST00000605204 KRTAP17-1Q9BYP8 105 aa13.71□□□□□ -0.22
SRSF4-206ENST00000605204 OTORQ9NRC9 128 aa13.71□□□□□ -0.22
SRSF4-206ENST00000605204 RNASE8Q8TDE3 154 aaKnown RBP13.7□□□□□ -0.22
SRSF4-206ENST00000605204 AGPAT4-IT1Q9H0P7 198 aa13.7□□□□□ -0.22
SRSF4-206ENST00000605204 TIMM8BQ9Y5J9 83 aaPredicted RBP13.7□□□□□ -0.22
SRSF4-206ENST00000605204 IGHV4-4A0A075B6R2 117 aa13.69□□□□□ -0.22
SRSF4-206ENST00000605204 IGKV2-40A0A087WW87 121 aaPredicted RBP13.69□□□□□ -0.22
SRSF4-206ENST00000605204 C7orf71A4D174 169 aa13.69□□□□□ -0.22
SRSF4-206ENST00000605204 G3V3Q6 166 aa13.69□□□□□ -0.22
SRSF4-206ENST00000605204 IGKV2D-40P01614 121 aaPredicted RBP13.69□□□□□ -0.22
SRSF4-206ENST00000605204 PRB4P10163 310 aaPredicted RBP13.69□□□□□ -0.22
SRSF4-206ENST00000605204 ZNF138P52744 262 aa13.69□□□□□ -0.22
SRSF4-206ENST00000605204 ZNF767PQ75MW2 155 aa13.69□□□□□ -0.22
SRSF4-206ENST00000605204 CMTM2Q8TAZ6 248 aa13.69□□□□□ -0.22
SRSF4-206ENST00000605204 NDUFAF3Q9BU61 184 aa13.69□□□□□ -0.22
SRSF4-206ENST00000605204 LENEPQ9Y5L5 61 aa13.69□□□□□ -0.22
SRSF4-206ENST00000605204 HECTD4Q9Y4D8 3996 aa13.68□□□□□ -0.22
SRSF4-206ENST00000605204 ARPC5O15511 151 aa13.68□□□□□ -0.22
SRSF4-206ENST00000605204 STAG3L2P0CL84 134 aa13.68□□□□□ -0.22
SRSF4-206ENST00000605204 STAG3L3P0CL85 134 aa13.68□□□□□ -0.22
SRSF4-206ENST00000605204 ERCC8Q13216 396 aa13.68□□□□□ -0.22
SRSF4-206ENST00000605204 RPL7L1Q6DKI1 246 aaKnown RBP13.68□□□□□ -0.22
SRSF4-206ENST00000605204 TMED6Q8WW62 240 aa13.68□□□□□ -0.22
SRSF4-206ENST00000605204 LINC00467Q9BRT7 94 aa13.68□□□□□ -0.22
SRSF4-206ENST00000605204 ACTR3CQ9C0K3 210 aaPredicted RBP13.68□□□□□ -0.22
SRSF4-206ENST00000605204 ZNF492Q9P255 531 aa13.68□□□□□ -0.22
SRSF4-206ENST00000605204 APLNQ9ULZ1 77 aa13.68□□□□□ -0.22
SRSF4-206ENST00000605204 VPS13DQ5THJ4 4388 aa13.67□□□□□ -0.22
SRSF4-206ENST00000605204 TRAV12-3A0A0B4J271 114 aa13.67□□□□□ -0.22
SRSF4-206ENST00000605204 PLAC8L1A1L4L8 177 aa13.67□□□□□ -0.22
SRSF4-206ENST00000605204 ARL14EPLP0DKL9 152 aa13.67□□□□□ -0.22
SRSF4-206ENST00000605204 HTN1P15515 57 aa13.67□□□□□ -0.22
SRSF4-206ENST00000605204 ZNF345Q14585 488 aa13.67□□□□□ -0.22
SRSF4-206ENST00000605204 RAB24Q969Q5 203 aa13.67□□□□□ -0.22
SRSF4-206ENST00000605204 GPX1P07203 203 aa13.66□□□□□ -0.22
SRSF4-206ENST00000605204 AZU1P20160 251 aa13.66□□□□□ -0.22
SRSF4-206ENST00000605204 KIR3DS1Q14943 382 aa13.66□□□□□ -0.22
SRSF4-206ENST00000605204 ZNF680Q8NEM1 530 aa13.66□□□□□ -0.22
SRSF4-206ENST00000605204 VGLL1Q99990 258 aa13.66□□□□□ -0.22
SRSF4-206ENST00000605204 SH3BGRL3Q9H299 93 aa13.66□□□□□ -0.22
SRSF4-206ENST00000605204 TMEM167BQ9NRX6 74 aa13.66□□□□□ -0.22
SRSF4-206ENST00000605204 DNAH6Q9C0G6 4158 aa13.66□□□□□ -0.22
SRSF4-206ENST00000605204 SERTM2A0A1B0GWG4 89 aa13.65□□□□□ -0.22
SRSF4-206ENST00000605204 DIRC3C9JPN6 131 aa13.65□□□□□ -0.22
SRSF4-206ENST00000605204 J3KRW8 73 aa13.65□□□□□ -0.22
SRSF4-206ENST00000605204 CXorf1O96002 111 aa13.65□□□□□ -0.22
SRSF4-206ENST00000605204 PGPA6NDG6 321 aa13.64□□□□□ -0.23
SRSF4-206ENST00000605204 HMSDA8MTL9 139 aa13.64□□□□□ -0.23
SRSF4-206ENST00000605204 SNURFLB1AK76 121 aa13.64□□□□□ -0.23
SRSF4-206ENST00000605204 ZFAND2AQ8N6M9 145 aa13.64□□□□□ -0.23
SRSF4-206ENST00000605204 SUN5Q8TC36 379 aa13.64□□□□□ -0.23
SRSF4-206ENST00000605204 ZNF324O75467 553 aaPredicted RBP13.63□□□□□ -0.23
SRSF4-206ENST00000605204 PRM2P04554 102 aa13.63□□□□□ -0.23
SRSF4-206ENST00000605204 GCHFRP30047 84 aa13.63□□□□□ -0.23
SRSF4-206ENST00000605204 ANXA2RQ3ZCQ2 193 aa13.63□□□□□ -0.23
SRSF4-206ENST00000605204 AKR1C8PQ5T2L2 129 aa13.63□□□□□ -0.23
SRSF4-206ENST00000605204 ST6GAL2Q96JF0 529 aa13.63□□□□□ -0.23
SRSF4-206ENST00000605204 CBY3A6NI87 242 aa13.62□□□□□ -0.23
SRSF4-206ENST00000605204 HMGB3O15347 200 aaKnown RBP13.62□□□□□ -0.23
SRSF4-206ENST00000605204 ATP5G1P05496 136 aa13.62□□□□□ -0.23
SRSF4-206ENST00000605204 P0DMU3 169 aa13.62□□□□□ -0.23
SRSF4-206ENST00000605204 FAM231AP0DMU4 169 aa13.62□□□□□ -0.23
SRSF4-206ENST00000605204 FAM231CP0DMU5 169 aa13.62□□□□□ -0.23
SRSF4-206ENST00000605204 DEFB130BP0DP73 79 aa13.62□□□□□ -0.23
SRSF4-206ENST00000605204 DEFB130AP0DP74 79 aa13.62□□□□□ -0.23
SRSF4-206ENST00000605204 RNASE4P34096 147 aaKnown RBP13.62□□□□□ -0.23
SRSF4-206ENST00000605204 ATP5G3P48201 142 aa13.62□□□□□ -0.23
SRSF4-206ENST00000605204 BTN1A1Q13410 526 aa13.62□□□□□ -0.23
SRSF4-206ENST00000605204 KCNRGQ8N5I3 272 aa13.62□□□□□ -0.23
SRSF4-206ENST00000605204 C5orf17Q8NAS9 161 aa13.62□□□□□ -0.23
SRSF4-206ENST00000605204 HYLS1Q96M11 299 aa13.62□□□□□ -0.23
SRSF4-206ENST00000605204 PCLOQ9Y6V0 5065 aa13.62□□□□□ -0.23
SRSF4-206ENST00000605204 CTXND1A0A1B0GTU2 59 aa13.61□□□□□ -0.23
SRSF4-206ENST00000605204 HTN3P15516 51 aa13.61□□□□□ -0.23
SRSF4-206ENST00000605204 CD300CQ08708 224 aa13.61□□□□□ -0.23
SRSF4-206ENST00000605204 DAZ2Q13117 558 aaKnown RBP13.61□□□□□ -0.23
SRSF4-206ENST00000605204 EIF4E3Q8N5X7 224 aaKnown RBP13.61□□□□□ -0.23
SRSF4-206ENST00000605204 Q8TAT8 98 aa13.61□□□□□ -0.23
SRSF4-206ENST00000605204 ARPC5LQ9BPX5 153 aa13.61□□□□□ -0.23
SRSF4-206ENST00000605204 NOP10Q9NPE3 64 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms