RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 ODF3Q96PU9 254 aa11.33□□□□□ -0.6
PPFIA4-213ENST00000601609 APLNQ9ULZ1 77 aa11.33□□□□□ -0.6
PPFIA4-213ENST00000601609 DEFB130BP0DP73 79 aa11.32□□□□□ -0.6
PPFIA4-213ENST00000601609 DEFB130AP0DP74 79 aa11.32□□□□□ -0.6
PPFIA4-213ENST00000601609 OR10G4Q8NGN3 311 aa11.32□□□□□ -0.6
PPFIA4-213ENST00000601609 OR10G9Q8NGN4 311 aa11.32□□□□□ -0.6
PPFIA4-213ENST00000601609 OR10G7Q8NGN6 311 aa11.32□□□□□ -0.6
PPFIA4-213ENST00000601609 NDUFAF3Q9BU61 184 aa11.32□□□□□ -0.6
PPFIA4-213ENST00000601609 Q9H3A6 140 aa11.32□□□□□ -0.6
PPFIA4-213ENST00000601609 RPH3ALQ9UNE2 315 aa11.32□□□□□ -0.6
PPFIA4-213ENST00000601609 LYSTQ99698 3801 aa11.32□□□□□ -0.6
PPFIA4-213ENST00000601609 BORCS7-ASMTA0A0B4J1R7 106 aa11.31□□□□□ -0.6
PPFIA4-213ENST00000601609 LYRM9A8MSI8 78 aa11.31□□□□□ -0.6
PPFIA4-213ENST00000601609 HMGB3O15347 200 aaKnown RBP11.31□□□□□ -0.6
PPFIA4-213ENST00000601609 ZNF503Q96F45 646 aa11.31□□□□□ -0.6
PPFIA4-213ENST00000601609 HYLS1Q96M11 299 aa11.31□□□□□ -0.6
PPFIA4-213ENST00000601609 LINC00477Q96M19 166 aa11.31□□□□□ -0.6
PPFIA4-213ENST00000601609 AGPAT4-IT1Q9H0P7 198 aa11.31□□□□□ -0.6
PPFIA4-213ENST00000601609 C7orf71A4D174 169 aa11.3□□□□□ -0.6
PPFIA4-213ENST00000601609 C1QBP02746 253 aa11.3□□□□□ -0.6
PPFIA4-213ENST00000601609 SLC25A5P05141 298 aaKnown RBP11.3□□□□□ -0.6
PPFIA4-213ENST00000601609 GPX1P07203 203 aa11.3□□□□□ -0.6
PPFIA4-213ENST00000601609 ATP6V0CP27449 155 aa11.3□□□□□ -0.6
PPFIA4-213ENST00000601609 CDC34P49427 236 aaPredicted RBP11.3□□□□□ -0.6
PPFIA4-213ENST00000601609 CMTM2Q8TAZ6 248 aa11.3□□□□□ -0.6
PPFIA4-213ENST00000601609 TMEM263Q8WUH6 116 aaKnown RBP11.3□□□□□ -0.6
PPFIA4-213ENST00000601609 RNF222A6NCQ9 220 aa11.29□□□□□ -0.6
PPFIA4-213ENST00000601609 SMLR1H3BR10 107 aa11.29□□□□□ -0.6
PPFIA4-213ENST00000601609 RNASE4P34096 147 aaKnown RBP11.29□□□□□ -0.6
PPFIA4-213ENST00000601609 BTN1A1Q13410 526 aa11.29□□□□□ -0.6
PPFIA4-213ENST00000601609 FAM74A1Q5RGS3 127 aa11.29□□□□□ -0.6
PPFIA4-213ENST00000601609 PQLC2Q6ZP29 291 aa11.29□□□□□ -0.6
PPFIA4-213ENST00000601609 ZNF493Q6ZR52 646 aa11.29□□□□□ -0.6
PPFIA4-213ENST00000601609 C9orf47Q6ZRZ4 202 aa11.29□□□□□ -0.6
PPFIA4-213ENST00000601609 LYPD1Q8N2G4 141 aa11.29□□□□□ -0.6
PPFIA4-213ENST00000601609 Q8TAT8 98 aa11.29□□□□□ -0.6
PPFIA4-213ENST00000601609 VGLL1Q99990 258 aa11.29□□□□□ -0.6
PPFIA4-213ENST00000601609 PSMG3Q9BT73 122 aaPredicted RBP11.29□□□□□ -0.6
PPFIA4-213ENST00000601609 NOP10Q9NPE3 64 aaKnown RBP11.29□□□□□ -0.6
PPFIA4-213ENST00000601609 TNFSF18Q9UNG2 199 aa11.29□□□□□ -0.6
PPFIA4-213ENST00000601609 TIMM8BQ9Y5J9 83 aaPredicted RBP11.29□□□□□ -0.6
PPFIA4-213ENST00000601609 SNURFLB1AK76 121 aa11.28□□□□□ -0.6
PPFIA4-213ENST00000601609 ARPC5O15511 151 aa11.28□□□□□ -0.6
PPFIA4-213ENST00000601609 MBP02144 154 aa11.28□□□□□ -0.6
PPFIA4-213ENST00000601609 NKX2-5P52952 324 aaPredicted RBP11.28□□□□□ -0.6
PPFIA4-213ENST00000601609 IQCF2Q8IXL9 164 aa11.28□□□□□ -0.6
PPFIA4-213ENST00000601609 OR2G3Q8NGZ4 309 aa11.28□□□□□ -0.6
PPFIA4-213ENST00000601609 PYGO2Q9BRQ0 406 aa11.28□□□□□ -0.6
PPFIA4-213ENST00000601609 SH3BGRL3Q9H299 93 aa11.28□□□□□ -0.6
PPFIA4-213ENST00000601609 HYDINQ4G0P3 5121 aa11.28□□□□□ -0.6
PPFIA4-213ENST00000601609 ARL14EPLP0DKL9 152 aa11.27□□□□□ -0.61
PPFIA4-213ENST00000601609 ZNF138P52744 262 aa11.27□□□□□ -0.61
PPFIA4-213ENST00000601609 RPL7L1Q6DKI1 246 aaKnown RBP11.27□□□□□ -0.61
PPFIA4-213ENST00000601609 UBE2DNLQ8IWF7 75 aa11.27□□□□□ -0.61
PPFIA4-213ENST00000601609 RNASE8Q8TDE3 154 aaKnown RBP11.27□□□□□ -0.61
PPFIA4-213ENST00000601609 RXFP4Q8TDU9 374 aa11.27□□□□□ -0.61
PPFIA4-213ENST00000601609 GNPNAT1Q96EK6 184 aaPredicted RBP11.27□□□□□ -0.61
PPFIA4-213ENST00000601609 OTORQ9NRC9 128 aa11.27□□□□□ -0.61
PPFIA4-213ENST00000601609 ZNF492Q9P255 531 aa11.27□□□□□ -0.61
PPFIA4-213ENST00000601609 PLAC8L1A1L4L8 177 aa11.26□□□□□ -0.61
PPFIA4-213ENST00000601609 PGPA6NDG6 321 aa11.26□□□□□ -0.61
PPFIA4-213ENST00000601609 CBY3A6NI87 242 aa11.26□□□□□ -0.61
PPFIA4-213ENST00000601609 F5H768 121 aa11.26□□□□□ -0.61
PPFIA4-213ENST00000601609 SERF2P84101 59 aa11.26□□□□□ -0.61
PPFIA4-213ENST00000601609 ACTR3CQ9C0K3 210 aaPredicted RBP11.26□□□□□ -0.61
PPFIA4-213ENST00000601609 KLLNB2CW77 178 aa11.25□□□□□ -0.61
PPFIA4-213ENST00000601609 DIRC3C9JPN6 131 aa11.25□□□□□ -0.61
PPFIA4-213ENST00000601609 RGS13O14921 159 aa11.25□□□□□ -0.61
PPFIA4-213ENST00000601609 ATP5G1P05496 136 aa11.25□□□□□ -0.61
PPFIA4-213ENST00000601609 P0DMU3 169 aa11.25□□□□□ -0.61
PPFIA4-213ENST00000601609 FAM231AP0DMU4 169 aa11.25□□□□□ -0.61
PPFIA4-213ENST00000601609 FAM231CP0DMU5 169 aa11.25□□□□□ -0.61
PPFIA4-213ENST00000601609 CRISP2P16562 243 aa11.25□□□□□ -0.61
PPFIA4-213ENST00000601609 ATP5G3P48201 142 aa11.25□□□□□ -0.61
PPFIA4-213ENST00000601609 TMEM88Q6PEY1 159 aa11.25□□□□□ -0.61
PPFIA4-213ENST00000601609 RAB24Q969Q5 203 aa11.25□□□□□ -0.61
PPFIA4-213ENST00000601609 FAM210BQ96KR6 192 aa11.25□□□□□ -0.61
PPFIA4-213ENST00000601609 RBAKDNA6NC62 111 aa11.24□□□□□ -0.61
PPFIA4-213ENST00000601609 STAG3L2P0CL84 134 aa11.24□□□□□ -0.61
PPFIA4-213ENST00000601609 STAG3L3P0CL85 134 aa11.24□□□□□ -0.61
PPFIA4-213ENST00000601609 PRR9Q5T870 116 aa11.24□□□□□ -0.61
PPFIA4-213ENST00000601609 EIF4E3Q8N5X7 224 aaKnown RBP11.24□□□□□ -0.61
PPFIA4-213ENST00000601609 ZNF680Q8NEM1 530 aa11.24□□□□□ -0.61
PPFIA4-213ENST00000601609 FAM19A4Q96LR4 140 aa11.24□□□□□ -0.61
PPFIA4-213ENST00000601609 ARPC5LQ9BPX5 153 aa11.24□□□□□ -0.61
PPFIA4-213ENST00000601609 GAGE12BA1L429 117 aa11.23□□□□□ -0.61
PPFIA4-213ENST00000601609 G3V3Q6 166 aa11.23□□□□□ -0.61
PPFIA4-213ENST00000601609 TAAR5O14804 337 aa11.23□□□□□ -0.61
PPFIA4-213ENST00000601609 GAGE7O76087 117 aa11.23□□□□□ -0.61
PPFIA4-213ENST00000601609 NMBP08949 121 aa11.23□□□□□ -0.61
PPFIA4-213ENST00000601609 GAGE12FP0CL80 117 aa11.23□□□□□ -0.61
PPFIA4-213ENST00000601609 GAGE12GP0CL81 117 aa11.23□□□□□ -0.61
PPFIA4-213ENST00000601609 GAGE12IP0CL82 117 aa11.23□□□□□ -0.61
PPFIA4-213ENST00000601609 GCHFRP30047 84 aa11.23□□□□□ -0.61
PPFIA4-213ENST00000601609 GNG5P63218 68 aa11.23□□□□□ -0.61
PPFIA4-213ENST00000601609 AKR1C8PQ5T2L2 129 aa11.23□□□□□ -0.61
PPFIA4-213ENST00000601609 GOLT1AQ6ZVE7 132 aa11.23□□□□□ -0.61
PPFIA4-213ENST00000601609 ZFAND2AQ8N6M9 145 aa11.23□□□□□ -0.61
PPFIA4-213ENST00000601609 CXorf1O96002 111 aa11.22□□□□□ -0.61
PPFIA4-213ENST00000601609 OR11H4Q8NGC9 324 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms