RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 C7orf71A4D174 169 aa12.36□□□□□ -0.43
CHMP2A-208ENST00000601220 HIST1H1EP10412 219 aaKnown RBP12.36□□□□□ -0.43
CHMP2A-208ENST00000601220 S100A11P31949 105 aa12.36□□□□□ -0.43
CHMP2A-208ENST00000601220 Q6ZRN7 208 aaPredicted RBP12.36□□□□□ -0.43
CHMP2A-208ENST00000601220 TMEM252Q8N6L7 170 aa12.36□□□□□ -0.43
CHMP2A-208ENST00000601220 LINC00477Q96M19 166 aa12.36□□□□□ -0.43
CHMP2A-208ENST00000601220 TRAV6A0A075B6T7 132 aa12.35□□□□□ -0.43
CHMP2A-208ENST00000601220 UBE2L5PA0A1B0GUS4 154 aa12.35□□□□□ -0.43
CHMP2A-208ENST00000601220 C5orf51A6NDU8 294 aa12.35□□□□□ -0.43
CHMP2A-208ENST00000601220 SPINK4O60575 86 aa12.35□□□□□ -0.43
CHMP2A-208ENST00000601220 CRISP2P16562 243 aa12.35□□□□□ -0.43
CHMP2A-208ENST00000601220 BTN1A1Q13410 526 aa12.35□□□□□ -0.43
CHMP2A-208ENST00000601220 C12orf45Q8N5I9 185 aaPredicted RBP12.35□□□□□ -0.43
CHMP2A-208ENST00000601220 ZNF680Q8NEM1 530 aa12.35□□□□□ -0.43
CHMP2A-208ENST00000601220 KLF12Q9Y4X4 402 aa12.35□□□□□ -0.43
CHMP2A-208ENST00000601220 PYYP10082 97 aa12.34□□□□□ -0.43
CHMP2A-208ENST00000601220 BAXQ07812 192 aa12.34□□□□□ -0.43
CHMP2A-208ENST00000601220 RAB32Q13637 225 aa12.34□□□□□ -0.43
CHMP2A-208ENST00000601220 PDE6HQ13956 83 aa12.34□□□□□ -0.43
CHMP2A-208ENST00000601220 GCSAMLQ5JQS6 135 aa12.34□□□□□ -0.43
CHMP2A-208ENST00000601220 Q6ZQT7 251 aa12.34□□□□□ -0.43
CHMP2A-208ENST00000601220 C9orf47Q6ZRZ4 202 aa12.34□□□□□ -0.43
CHMP2A-208ENST00000601220 EXOC3-AS1Q8N2X6 119 aa12.34□□□□□ -0.43
CHMP2A-208ENST00000601220 EIF4E3Q8N5X7 224 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-208ENST00000601220 NUDT15Q9NV35 164 aa12.34□□□□□ -0.43
CHMP2A-208ENST00000601220 PRELID1Q9Y255 219 aa12.34□□□□□ -0.43
CHMP2A-208ENST00000601220 TRGV2A0A075B6R0 118 aa12.33□□□□□ -0.44
CHMP2A-208ENST00000601220 TRGV1A0A0A0MS02 117 aa12.33□□□□□ -0.44
CHMP2A-208ENST00000601220 RNASE4P34096 147 aaKnown RBP12.33□□□□□ -0.44
CHMP2A-208ENST00000601220 LINC00315P59091 139 aa12.33□□□□□ -0.44
CHMP2A-208ENST00000601220 PRR9Q5T870 116 aa12.33□□□□□ -0.44
CHMP2A-208ENST00000601220 ZFAND2AQ8N6M9 145 aa12.33□□□□□ -0.44
CHMP2A-208ENST00000601220 FAM167A-AS1Q96KT0 104 aa12.33□□□□□ -0.44
CHMP2A-208ENST00000601220 SCRT2Q9NQ03 307 aa12.33□□□□□ -0.44
CHMP2A-208ENST00000601220 TP53TG3Q9ULZ0 132 aa12.33□□□□□ -0.44
CHMP2A-208ENST00000601220 FUT9Q9Y231 359 aa12.33□□□□□ -0.44
CHMP2A-208ENST00000601220 NMBP08949 121 aa12.32□□□□□ -0.44
CHMP2A-208ENST00000601220 PVALBP20472 110 aaPredicted RBP12.32□□□□□ -0.44
CHMP2A-208ENST00000601220 TCL1AP56279 114 aa12.32□□□□□ -0.44
CHMP2A-208ENST00000601220 ATP6V1FQ16864 119 aa12.32□□□□□ -0.44
CHMP2A-208ENST00000601220 VGLL1Q99990 258 aa12.32□□□□□ -0.44
CHMP2A-208ENST00000601220 SLC25A2Q9BXI2 301 aa12.32□□□□□ -0.44
CHMP2A-208ENST00000601220 MPDU1O75352 247 aa12.31□□□□□ -0.44
CHMP2A-208ENST00000601220 FGF7P21781 194 aa12.31□□□□□ -0.44
CHMP2A-208ENST00000601220 S100A10P60903 97 aa12.31□□□□□ -0.44
CHMP2A-208ENST00000601220 IBA57Q5T440 356 aaKnown RBP12.31□□□□□ -0.44
CHMP2A-208ENST00000601220 STX12Q86Y82 276 aa12.31□□□□□ -0.44
CHMP2A-208ENST00000601220 BLNKQ8WV28 456 aa12.31□□□□□ -0.44
CHMP2A-208ENST00000601220 ST6GAL2Q96JF0 529 aa12.31□□□□□ -0.44
CHMP2A-208ENST00000601220 NPCDR1Q9BY65 106 aa12.31□□□□□ -0.44
CHMP2A-208ENST00000601220 TIMM9Q9Y5J7 89 aa12.31□□□□□ -0.44
CHMP2A-208ENST00000601220 IGKV2-40A0A087WW87 121 aaPredicted RBP12.3□□□□□ -0.44
CHMP2A-208ENST00000601220 IGKV2D-40P01614 121 aaPredicted RBP12.3□□□□□ -0.44
CHMP2A-208ENST00000601220 H2AFB2P0C5Z0 115 aa12.3□□□□□ -0.44
CHMP2A-208ENST00000601220 HBG1P69891 147 aa12.3□□□□□ -0.44
CHMP2A-208ENST00000601220 HBG2P69892 147 aa12.3□□□□□ -0.44
CHMP2A-208ENST00000601220 ICAM4Q14773 271 aa12.3□□□□□ -0.44
CHMP2A-208ENST00000601220 SIVA1O15304 175 aa12.29□□□□□ -0.44
CHMP2A-208ENST00000601220 GPX1P07203 203 aa12.29□□□□□ -0.44
CHMP2A-208ENST00000601220 NHLH2Q02577 135 aa12.29□□□□□ -0.44
CHMP2A-208ENST00000601220 MIR17HGQ75NE6 70 aa12.29□□□□□ -0.44
CHMP2A-208ENST00000601220 ZNF492Q9P255 531 aa12.29□□□□□ -0.44
CHMP2A-208ENST00000601220 IGHV1OR15-1A0A075B7D0 117 aa12.28□□□□□ -0.44
CHMP2A-208ENST00000601220 PAX4O43316 350 aa12.28□□□□□ -0.44
CHMP2A-208ENST00000601220 NXPH4O95158 308 aa12.28□□□□□ -0.44
CHMP2A-208ENST00000601220 FHL2Q14192 279 aa12.28□□□□□ -0.44
CHMP2A-208ENST00000601220 GPN1Q9HCN4 374 aaPredicted RBP12.28□□□□□ -0.44
CHMP2A-208ENST00000601220 IGHV3-53P01767 116 aa12.27□□□□□ -0.45
CHMP2A-208ENST00000601220 NBEAP1P0C6P0 100 aa12.27□□□□□ -0.45
CHMP2A-208ENST00000601220 CRYBA4P53673 196 aa12.27□□□□□ -0.45
CHMP2A-208ENST00000601220 FAM122CQ6P4D5 195 aa12.27□□□□□ -0.45
CHMP2A-208ENST00000601220 LYPD5Q6UWN5 251 aa12.27□□□□□ -0.45
CHMP2A-208ENST00000601220 FXYD5Q96DB9 178 aa12.27□□□□□ -0.45
CHMP2A-208ENST00000601220 AAMDCQ9H7C9 122 aa12.27□□□□□ -0.45
CHMP2A-208ENST00000601220 MRPL16Q9NX20 251 aaKnown RBP12.27□□□□□ -0.45
CHMP2A-208ENST00000601220 PRO0255Q9UI72 69 aa12.27□□□□□ -0.45
CHMP2A-208ENST00000601220 TNFRSF18Q9Y5U5 241 aa12.27□□□□□ -0.45
CHMP2A-208ENST00000601220 ICOSQ9Y6W8 199 aa12.27□□□□□ -0.45
CHMP2A-208ENST00000601220 FAT1Q14517 4588 aa12.26□□□□□ -0.45
CHMP2A-208ENST00000601220 RGS13O14921 159 aa12.26□□□□□ -0.45
CHMP2A-208ENST00000601220 TMEM78Q5T7P6 136 aa12.26□□□□□ -0.45
CHMP2A-208ENST00000601220 THAP6Q8TBB0 222 aa12.26□□□□□ -0.45
CHMP2A-208ENST00000601220 CCDC32Q9BV29 185 aa12.26□□□□□ -0.45
CHMP2A-208ENST00000601220 OR51M1Q9H341 326 aa12.26□□□□□ -0.45
CHMP2A-208ENST00000601220 TRBV7-9A0A0J9YWB2 115 aa12.25□□□□□ -0.45
CHMP2A-208ENST00000601220 FUSP35637 526 aaKnown RBP eCLIP12.25□□□□□ -0.45
CHMP2A-208ENST00000601220 OR5C1Q8NGR4 320 aa12.25□□□□□ -0.45
CHMP2A-208ENST00000601220 PGPEP1Q9NXJ5 209 aa12.25□□□□□ -0.45
CHMP2A-208ENST00000601220 HHLA3Q9XRX5 114 aa12.25□□□□□ -0.45
CHMP2A-208ENST00000601220 HERC1Q15751 4861 aa12.25□□□□□ -0.45
CHMP2A-208ENST00000601220 H0YIZ8 118 aa12.24□□□□□ -0.45
CHMP2A-208ENST00000601220 PRAF2O60831 178 aa12.24□□□□□ -0.45
CHMP2A-208ENST00000601220 ZNF138P52744 262 aa12.24□□□□□ -0.45
CHMP2A-208ENST00000601220 SLAQ13239 276 aa12.24□□□□□ -0.45
CHMP2A-208ENST00000601220 Q8TAT8 98 aa12.24□□□□□ -0.45
CHMP2A-208ENST00000601220 PHYHIPLQ96FC7 376 aa12.24□□□□□ -0.45
CHMP2A-208ENST00000601220 C8orf49Q96NF6 230 aa12.24□□□□□ -0.45
CHMP2A-208ENST00000601220 FAM240BA0A1B0GVZ2 78 aa12.23□□□□□ -0.45
CHMP2A-208ENST00000601220 SIX6O95475 246 aa12.23□□□□□ -0.45
CHMP2A-208ENST00000601220 OR10J4P0C629 311 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms