RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 C20orf173Q96LM9 149 aa8.35□□□□□ -1.07
LIG1-220ENST00000601091 DPM3Q9P2X0 92 aa8.35□□□□□ -1.07
LIG1-220ENST00000601091 TRAV8-1A0A0A6YYK1 113 aa8.35□□□□□ -1.07
LIG1-220ENST00000601091 GGTLC3B5MD39 225 aa8.35□□□□□ -1.07
LIG1-220ENST00000601091 SMIM13P0DJ93 91 aa8.35□□□□□ -1.07
LIG1-220ENST00000601091 IGHV1-8P0DP01 117 aa8.35□□□□□ -1.07
LIG1-220ENST00000601091 IGFL2Q6UWQ7 119 aa8.35□□□□□ -1.07
LIG1-220ENST00000601091 FOXI2Q6ZQN5 318 aa8.35□□□□□ -1.07
LIG1-220ENST00000601091 LINC01560Q8TB33 94 aa8.35□□□□□ -1.07
LIG1-220ENST00000601091 BRK1Q8WUW1 75 aa8.35□□□□□ -1.07
LIG1-220ENST00000601091 ZGRF1Q86YA3 2104 aa8.35□□□□□ -1.07
LIG1-220ENST00000601091 ATG2AQ2TAZ0 1938 aa8.35□□□□□ -1.07
LIG1-220ENST00000601091 PRB3Q04118 309 aaPredicted RBP8.35□□□□□ -1.07
LIG1-220ENST00000601091 GAGE2AQ6NT46 116 aa8.35□□□□□ -1.07
LIG1-220ENST00000601091 PRO3102Q9H379 93 aa8.35□□□□□ -1.07
LIG1-220ENST00000601091 TRBV20OR9-2A0A075B6H5 130 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 A0A1B0GUT8 65 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 PROP1O75360 226 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 LHBP01229 141 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 FAM231DQ6ZW35 169 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 ATP5L2Q7Z4Y8 100 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 OR8A1Q8NGG7 326 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 OTORQ9NRC9 128 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 MALRD1Q5VYJ5 2156 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 TMEM262E9PQX1 116 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 NHLRC4P0CG21 123 aaPredicted RBP8.34□□□□□ -1.07
LIG1-220ENST00000601091 GCSHP23434 173 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 IGFL3Q6UXB1 125 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 WFDC11Q8NEX6 87 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 NUP35Q8NFH5 326 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 TRGV9Q99603 122 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 AP5S1Q9NUS5 200 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 RNF114Q9Y508 228 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 FAM215AQ9Y5M1 114 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 TANC2Q9HCD6 1990 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 A0A0G2JNJ9 132 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 LOC389332A0A1B0GUA5 103 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 WISP2O76076 250 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 WT1P19544 449 aaPredicted RBP8.34□□□□□ -1.07
LIG1-220ENST00000601091 AMTNQ6UX39 209 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 ZNF833PQ6ZTB9 187 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 Q9UFV3 132 aa8.34□□□□□ -1.07
LIG1-220ENST00000601091 KLK5Q9Y337 293 aaPredicted RBP8.34□□□□□ -1.07
LIG1-220ENST00000601091 PIEZO2Q9H5I5 2752 aa8.33□□□□□ -1.08
LIG1-220ENST00000601091 H3BVH4 76 aa8.33□□□□□ -1.08
LIG1-220ENST00000601091 HLA-DRB1P01911 266 aa8.33□□□□□ -1.08
LIG1-220ENST00000601091 CD24P25063 80 aa8.33□□□□□ -1.08
LIG1-220ENST00000601091 SPRNQ5BIV9 151 aa8.33□□□□□ -1.08
LIG1-220ENST00000601091 LYPD2Q6UXB3 125 aa8.33□□□□□ -1.08
LIG1-220ENST00000601091 OR4X2Q8NGF9 303 aa8.33□□□□□ -1.08
LIG1-220ENST00000601091 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.33□□□□□ -1.08
LIG1-220ENST00000601091 TEX36Q5VZQ5 186 aa8.33□□□□□ -1.08
LIG1-220ENST00000601091 SPATA12Q7Z6I5 190 aa8.33□□□□□ -1.08
LIG1-220ENST00000601091 GATD1Q8NB37 220 aa8.33□□□□□ -1.08
LIG1-220ENST00000601091 ZNF256Q9Y2P7 627 aaPredicted RBP8.33□□□□□ -1.08
LIG1-220ENST00000601091 LYNX1G3V0Z9 82 aa8.33□□□□□ -1.08
LIG1-220ENST00000601091 LYNX1P0DP58 116 aa8.33□□□□□ -1.08
LIG1-220ENST00000601091 EIF4EBP1Q13541 118 aaPredicted RBP8.33□□□□□ -1.08
LIG1-220ENST00000601091 CR1LQ2VPA4 569 aa8.33□□□□□ -1.08
LIG1-220ENST00000601091 COL4A2P08572 1712 aa8.33□□□□□ -1.08
LIG1-220ENST00000601091 CFAP47Q6ZTR5 3102 aa8.33□□□□□ -1.08
LIG1-220ENST00000601091 ZNF329Q86UD4 541 aa8.32□□□□□ -1.08
LIG1-220ENST00000601091 A0A1W2PS18 150 aa8.32□□□□□ -1.08
LIG1-220ENST00000601091 FCER1GP30273 86 aa8.32□□□□□ -1.08
LIG1-220ENST00000601091 ZFHX2Q9C0A1 2572 aaPredicted RBP8.32□□□□□ -1.08
LIG1-220ENST00000601091 TRAV8-2A0A0B4J237 113 aa8.32□□□□□ -1.08
LIG1-220ENST00000601091 TCRAP04437 139 aa8.32□□□□□ -1.08
LIG1-220ENST00000601091 PRSS1P07477 247 aa8.32□□□□□ -1.08
LIG1-220ENST00000601091 CKS2P33552 79 aa8.32□□□□□ -1.08
LIG1-220ENST00000601091 ADORA2A-AS1P86434 159 aa8.32□□□□□ -1.08
LIG1-220ENST00000601091 WT1-ASQ06250 92 aa8.32□□□□□ -1.08
LIG1-220ENST00000601091 PIP4P1Q86T03 277 aa8.32□□□□□ -1.08
LIG1-220ENST00000601091 JPT2Q9H910 190 aa8.32□□□□□ -1.08
LIG1-220ENST00000601091 KLF12Q9Y4X4 402 aa8.32□□□□□ -1.08
LIG1-220ENST00000601091 FOXI1Q12951 378 aa8.31□□□□□ -1.08
LIG1-220ENST00000601091 TWIST1Q15672 202 aa8.31□□□□□ -1.08
LIG1-220ENST00000601091 TMEM219Q86XT9 240 aa8.31□□□□□ -1.08
LIG1-220ENST00000601091 EXOC3-AS1Q8N2X6 119 aa8.31□□□□□ -1.08
LIG1-220ENST00000601091 C21orf62Q9NYP8 219 aa8.31□□□□□ -1.08
LIG1-220ENST00000601091 S4R3C0 116 aa8.31□□□□□ -1.08
LIG1-220ENST00000601091 S100A4P26447 101 aaKnown RBP8.31□□□□□ -1.08
LIG1-220ENST00000601091 IGHV1-3A0A0C4DH29 117 aa8.31□□□□□ -1.08
LIG1-220ENST00000601091 ECSCRQ19T08 205 aa8.31□□□□□ -1.08
LIG1-220ENST00000601091 MSMPQ1L6U9 139 aa8.31□□□□□ -1.08
LIG1-220ENST00000601091 OR10J6PQ8NGY7 276 aa8.31□□□□□ -1.08
LIG1-220ENST00000601091 SLC25A2Q9BXI2 301 aa8.31□□□□□ -1.08
LIG1-220ENST00000601091 COL6A6A6NMZ7 2263 aa8.31□□□□□ -1.08
LIG1-220ENST00000601091 PRSS46E5RG02 174 aa8.3□□□□□ -1.08
LIG1-220ENST00000601091 RABAC1Q9UI14 185 aa8.3□□□□□ -1.08
LIG1-220ENST00000601091 GUSBP1Q15486 140 aa8.3□□□□□ -1.08
LIG1-220ENST00000601091 PVRIGQ6DKI7 326 aa8.3□□□□□ -1.08
LIG1-220ENST00000601091 CHCHD5Q9BSY4 110 aa8.3□□□□□ -1.08
LIG1-220ENST00000601091 TIMM23O14925 209 aa8.3□□□□□ -1.08
LIG1-220ENST00000601091 APOHP02749 345 aaPredicted RBP8.3□□□□□ -1.08
LIG1-220ENST00000601091 TMEM155Q4W5P6 130 aa8.3□□□□□ -1.08
LIG1-220ENST00000601091 CIARTQ8N365 385 aaPredicted RBP8.3□□□□□ -1.08
LIG1-220ENST00000601091 LINC00311Q8N616 119 aa8.3□□□□□ -1.08
LIG1-220ENST00000601091 SMIM27A0A1W2PRY6 76 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 C18orf32Q8TCD1 76 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 C2orf48Q96LS8 159 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms