RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 OR4E1P0C645 316 aa11.28□□□□□ -0.6
USE1-208ENST00000600970 RNASE4P34096 147 aaKnown RBP11.28□□□□□ -0.6
USE1-208ENST00000600970 MRPL53Q96EL3 112 aaKnown RBP11.28□□□□□ -0.6
USE1-208ENST00000600970 SLIRPQ9GZT3 109 aaKnown RBP11.28□□□□□ -0.6
USE1-208ENST00000600970 DNAJC4Q9NNZ3 241 aa11.28□□□□□ -0.6
USE1-208ENST00000600970 E5RGE8 158 aa11.27□□□□□ -0.61
USE1-208ENST00000600970 K7EQD1 137 aa11.27□□□□□ -0.61
USE1-208ENST00000600970 ZNF253O75346 499 aa11.27□□□□□ -0.61
USE1-208ENST00000600970 SCGB1D2O95969 90 aa11.27□□□□□ -0.61
USE1-208ENST00000600970 TAS2R30P59541 319 aa11.27□□□□□ -0.61
USE1-208ENST00000600970 UBE2MP61081 183 aaKnown RBP11.27□□□□□ -0.61
USE1-208ENST00000600970 LINC00477Q96M19 166 aa11.27□□□□□ -0.61
USE1-208ENST00000600970 GGACTQ9BVM4 153 aa11.27□□□□□ -0.61
USE1-208ENST00000600970 MRPL32Q9BYC8 188 aaKnown RBP11.27□□□□□ -0.61
USE1-208ENST00000600970 AGPAT4-IT1Q9H0P7 198 aa11.27□□□□□ -0.61
USE1-208ENST00000600970 FAM30AQ9NZY2 134 aa11.27□□□□□ -0.61
USE1-208ENST00000600970 KRTAP29-1A8MX34 341 aaPredicted RBP11.26□□□□□ -0.61
USE1-208ENST00000600970 GPX1P07203 203 aa11.26□□□□□ -0.61
USE1-208ENST00000600970 CRYGDP07320 174 aa11.26□□□□□ -0.61
USE1-208ENST00000600970 CRISP2P16562 243 aa11.26□□□□□ -0.61
USE1-208ENST00000600970 SRIP30626 198 aa11.26□□□□□ -0.61
USE1-208ENST00000600970 PYDC2Q56P42 97 aa11.26□□□□□ -0.61
USE1-208ENST00000600970 Q6ZQT7 251 aa11.26□□□□□ -0.61
USE1-208ENST00000600970 NTN5Q8WTR8 489 aaPredicted RBP11.26□□□□□ -0.61
USE1-208ENST00000600970 RAB2BQ8WUD1 216 aa11.26□□□□□ -0.61
USE1-208ENST00000600970 TRBV19A0A075B6N1 114 aa11.25□□□□□ -0.61
USE1-208ENST00000600970 TRGV4A0A0C4DH28 118 aa11.25□□□□□ -0.61
USE1-208ENST00000600970 RGS13O14921 159 aa11.25□□□□□ -0.61
USE1-208ENST00000600970 PRR9Q5T870 116 aa11.25□□□□□ -0.61
USE1-208ENST00000600970 Q6ZRG5 221 aa11.25□□□□□ -0.61
USE1-208ENST00000600970 DEDD2Q8WXF8 326 aa11.25□□□□□ -0.61
USE1-208ENST00000600970 MRPS26Q9BYN8 205 aaKnown RBP11.25□□□□□ -0.61
USE1-208ENST00000600970 RCL1Q9Y2P8 373 aaKnown RBP11.25□□□□□ -0.61
USE1-208ENST00000600970 IGHV1OR15-1A0A075B7D0 117 aa11.24□□□□□ -0.61
USE1-208ENST00000600970 PSCAO43653 123 aa11.24□□□□□ -0.61
USE1-208ENST00000600970 CAMLGP49069 296 aa11.24□□□□□ -0.61
USE1-208ENST00000600970 MIC13Q5XKP0 118 aa11.24□□□□□ -0.61
USE1-208ENST00000600970 NRARPQ7Z6K4 114 aa11.24□□□□□ -0.61
USE1-208ENST00000600970 IQCF2Q8IXL9 164 aa11.24□□□□□ -0.61
USE1-208ENST00000600970 C10orf126Q8N4M7 172 aa11.24□□□□□ -0.61
USE1-208ENST00000600970 ZFAND2AQ8N6M9 145 aa11.24□□□□□ -0.61
USE1-208ENST00000600970 OR1L4Q8NGR5 311 aa11.24□□□□□ -0.61
USE1-208ENST00000600970 ARPC5LQ9BPX5 153 aa11.24□□□□□ -0.61
USE1-208ENST00000600970 PRELID1Q9Y255 219 aa11.24□□□□□ -0.61
USE1-208ENST00000600970 NDUFB4O95168 129 aa11.23□□□□□ -0.61
USE1-208ENST00000600970 SFTA3P0C7M3 94 aa11.23□□□□□ -0.61
USE1-208ENST00000600970 GYPEP15421 78 aa11.23□□□□□ -0.61
USE1-208ENST00000600970 IAH1Q2TAA2 248 aaPredicted RBP11.23□□□□□ -0.61
USE1-208ENST00000600970 C9orf47Q6ZRZ4 202 aa11.23□□□□□ -0.61
USE1-208ENST00000600970 Q8N814 137 aa11.23□□□□□ -0.61
USE1-208ENST00000600970 ZNF479Q96JC4 524 aa11.23□□□□□ -0.61
USE1-208ENST00000600970 V9GYH0 126 aa11.23□□□□□ -0.61
USE1-208ENST00000600970 HMCN2Q8NDA2 5059 aa11.23□□□□□ -0.61
USE1-208ENST00000600970 C7orf66A4D0T2 115 aa11.22□□□□□ -0.61
USE1-208ENST00000600970 PLA2G1BP04054 148 aaKnown RBP11.22□□□□□ -0.61
USE1-208ENST00000600970 NMBP08949 121 aa11.22□□□□□ -0.61
USE1-208ENST00000600970 TMBIM6P55061 237 aa11.22□□□□□ -0.61
USE1-208ENST00000600970 ZNF415Q09FC8 603 aa11.22□□□□□ -0.61
USE1-208ENST00000600970 PCNPQ8WW12 178 aaKnown RBP11.22□□□□□ -0.61
USE1-208ENST00000600970 PFDN5Q99471 154 aa11.22□□□□□ -0.61
USE1-208ENST00000600970 BCL7BQ9BQE9 202 aa11.22□□□□□ -0.61
USE1-208ENST00000600970 IGKV2-40A0A087WW87 121 aaPredicted RBP11.21□□□□□ -0.61
USE1-208ENST00000600970 IGKV2D-40P01614 121 aaPredicted RBP11.21□□□□□ -0.61
USE1-208ENST00000600970 ORM1P02763 201 aa11.21□□□□□ -0.61
USE1-208ENST00000600970 RAB31Q13636 194 aa11.21□□□□□ -0.61
USE1-208ENST00000600970 EXOC3-AS1Q8N2X6 119 aa11.21□□□□□ -0.61
USE1-208ENST00000600970 C12orf45Q8N5I9 185 aaPredicted RBP11.21□□□□□ -0.61
USE1-208ENST00000600970 OR10G4Q8NGN3 311 aa11.21□□□□□ -0.61
USE1-208ENST00000600970 SRRQ9GZT4 340 aa11.21□□□□□ -0.61
USE1-208ENST00000600970 GSKIPQ9P0R6 139 aa11.21□□□□□ -0.61
USE1-208ENST00000600970 FLVCR2Q9UPI3 526 aa11.21□□□□□ -0.61
USE1-208ENST00000600970 TIMM9Q9Y5J7 89 aa11.21□□□□□ -0.61
USE1-208ENST00000600970 UBR4Q5T4S7 5183 aa11.21□□□□□ -0.62
USE1-208ENST00000600970 MBPP02686 304 aaPredicted RBP11.2□□□□□ -0.62
USE1-208ENST00000600970 C1QBP02746 253 aa11.2□□□□□ -0.62
USE1-208ENST00000600970 HIST1H1EP10412 219 aaKnown RBP11.2□□□□□ -0.62
USE1-208ENST00000600970 TMEM78Q5T7P6 136 aa11.2□□□□□ -0.62
USE1-208ENST00000600970 SERTAD4-AS1Q5TG53 156 aa11.2□□□□□ -0.62
USE1-208ENST00000600970 DEFB104AQ8WTQ1 72 aa11.2□□□□□ -0.62
USE1-208ENST00000600970 BLNKQ8WV28 456 aa11.2□□□□□ -0.62
USE1-208ENST00000600970 TXNDC17Q9BRA2 123 aa11.2□□□□□ -0.62
USE1-208ENST00000600970 TMEM14CQ9P0S9 112 aa11.2□□□□□ -0.62
USE1-208ENST00000600970 ZNF492Q9P255 531 aa11.2□□□□□ -0.62
USE1-208ENST00000600970 IGHV3-38A0A0C4DH36 116 aa11.19□□□□□ -0.62
USE1-208ENST00000600970 NDUFB6O95139 128 aa11.19□□□□□ -0.62
USE1-208ENST00000600970 PYYP10082 97 aa11.19□□□□□ -0.62
USE1-208ENST00000600970 PDE6HQ13956 83 aa11.19□□□□□ -0.62
USE1-208ENST00000600970 SLC39A9Q9NUM3 307 aa11.19□□□□□ -0.62
USE1-208ENST00000600970 WDR83OSQ9Y284 106 aa11.19□□□□□ -0.62
USE1-208ENST00000600970 IBA57-AS1B1ANH7 110 aa11.18□□□□□ -0.62
USE1-208ENST00000600970 C9JCJ5 164 aa11.18□□□□□ -0.62
USE1-208ENST00000600970 H3BMQ9 156 aa11.18□□□□□ -0.62
USE1-208ENST00000600970 RPL29P47914 159 aaKnown RBP11.18□□□□□ -0.62
USE1-208ENST00000600970 LINC00528Q8N1L1 170 aa11.18□□□□□ -0.62
USE1-208ENST00000600970 AAMDCQ9H7C9 122 aa11.18□□□□□ -0.62
USE1-208ENST00000600970 LRP1Q07954 4544 aaKnown RBP11.17□□□□□ -0.62
USE1-208ENST00000600970 LOC100131303A0A0U1RQF7 123 aa11.17□□□□□ -0.62
USE1-208ENST00000600970 L7N2F9 121 aa11.17□□□□□ -0.62
USE1-208ENST00000600970 CST7O76096 145 aa11.17□□□□□ -0.62
USE1-208ENST00000600970 VAMP2P63027 116 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms