RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 SHANK2-AS3Q9BTD1 123 aa7.01□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 SMIM3Q9BZL3 60 aa7.01□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 SLC45A2Q9UMX9 530 aa7.01□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 LYRM9A8MSI8 78 aa7□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 NUDT3O95989 172 aa7□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 INSP01308 110 aa7□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 LINC00869P0C866 280 aa7□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 ORM2P19652 201 aa7□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 TSPOP30536 169 aa7□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 RAB5CP51148 216 aa7□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 CAV2P51636 162 aa7□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 FAM3BP58499 235 aaPredicted RBP7□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 ZNF266Q14584 549 aa7□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 TOR2AQ5JU69 321 aa7□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 OR1B1Q8NGR6 318 aa7□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 ATP5SQ99766 215 aa7□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 TMEM208Q9BTX3 173 aa7□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 SMCO3A2RU48 225 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 FNDC10F2Z333 226 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 F5H768 121 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 SLC17A3O00476 420 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 CST7O76096 145 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 ATP6V0CP27449 155 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 GALR1P47211 349 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 MEOX2P50222 304 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 BLOC1S1P78537 153 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 ATP6V1FQ16864 119 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 UQCC3Q6UW78 93 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 SPATA12Q7Z6I5 190 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 STX12Q86Y82 276 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 BPIFCQ8NFQ6 507 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 ATG101Q9BSB4 218 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 PSMG3Q9BT73 122 aaPredicted RBP6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 PFDN2Q9UHV9 154 aa6.99□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 A0A087X0K7 114 aa6.98□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 UMAD1C9J7I0 102 aa6.98□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 FABP1P07148 127 aa6.98□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 HOXA5P20719 270 aa6.98□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 FUSP35637 526 aaKnown RBP eCLIP6.98□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 RPP30P78346 268 aaKnown RBP6.98□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 HIST1H1AQ02539 215 aaPredicted RBP6.98□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 C10orf91Q5T1B1 145 aa6.98□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 PXDC1Q5TGL8 231 aa6.98□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 SSX7Q7RTT5 188 aa6.98□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 RNASE8Q8TDE3 154 aaKnown RBP6.98□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 TMEM37Q8WXS4 190 aa6.98□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 GNPNAT1Q96EK6 184 aaPredicted RBP6.98□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 SH3BGRL3Q9H299 93 aa6.98□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 LRP1Q07954 4544 aaKnown RBP6.98□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 TRAV1-1A0A0B4J248 108 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 KRBOX1C9JBD0 128 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 AGPAT2O15120 278 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 DUSP14O95147 198 aaKnown RBP6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 ATP5G1P05496 136 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 SNRPCP09234 159 aaKnown RBP6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 ATP5G3P48201 142 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 HBG1P69891 147 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 HBG2P69892 147 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 CLINT1Q14677 625 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 DPPA3Q6W0C5 159 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 LINC00612Q8N6U2 182 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 HSD17B11Q8NBQ5 300 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 ZNF738Q8NE65 137 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 OR8A1Q8NGG7 326 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 OR2G3Q8NGZ4 309 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 TMEM147Q9BVK8 224 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 WDR61Q9GZS3 305 aaKnown RBP6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 HIGD1AQ9Y241 93 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 WDR83OSQ9Y284 106 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 TIMM9Q9Y5J7 89 aa6.97□□□□□ -1.29
MIA-RAB4B-201ENST00000600729 CBY3A6NI87 242 aa6.96□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 PRAC2D3DTV9 90 aa6.96□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 TEX46H3BTG2 121 aa6.96□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 H3BTX0 84 aa6.96□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 HYPMO75409 117 aa6.96□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 IGLC2P0DOY2 106 aa6.96□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 SERF2P84101 59 aa6.96□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 MIC13Q5XKP0 118 aa6.96□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 Q6ZRG5 221 aa6.96□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 Q6ZRN7 208 aaPredicted RBP6.96□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 OR10P1Q8NGE3 313 aa6.96□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 GGACTQ9BVM4 153 aa6.96□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 NPVFQ9HCQ7 196 aa6.96□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 NOP10Q9NPE3 64 aaKnown RBP6.96□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 TRAV26-1A0A087WT03 109 aa6.95□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 TRAV5A0A0B4J249 113 aa6.95□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 A0A0J9YY99 117 aa6.95□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 KRTAP29-1A8MX34 341 aaPredicted RBP6.95□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 H3BQ15 152 aa6.95□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 IFNA5P01569 189 aa6.95□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 OR5G3P0C626 314 aa6.95□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 HTN1P15515 57 aa6.95□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 FHITP49789 147 aa6.95□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 TAS2R60P59551 318 aa6.95□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 SELENOTP62341 195 aa6.95□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 PSG3Q16557 428 aa6.95□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 ESRGQ1W209 222 aa6.95□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 GCSAMLQ5JQS6 135 aa6.95□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 SAMD13Q5VXD3 122 aa6.95□□□□□ -1.3
MIA-RAB4B-201ENST00000600729 TEPPQ6URK8 271 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms