RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 TMEM208Q9BTX3 173 aa11.21□□□□□ -0.61
RPS28-203ENST00000600659 PPP1R14DQ9NXH3 145 aa11.21□□□□□ -0.61
RPS28-203ENST00000600659 TRAV10A0A0B4J240 114 aa11.2□□□□□ -0.62
RPS28-203ENST00000600659 A0A1W2PPV4 95 aa11.2□□□□□ -0.62
RPS28-203ENST00000600659 SPART-AS1P0CW21 52 aa11.2□□□□□ -0.62
RPS28-203ENST00000600659 ARL14EPLP0DKL9 152 aa11.2□□□□□ -0.62
RPS28-203ENST00000600659 CRISP2P16562 243 aa11.2□□□□□ -0.62
RPS28-203ENST00000600659 CDC34P49427 236 aaPredicted RBP11.2□□□□□ -0.62
RPS28-203ENST00000600659 TAS2R60P59551 318 aa11.2□□□□□ -0.62
RPS28-203ENST00000600659 ZFAND2AQ8N6M9 145 aa11.2□□□□□ -0.62
RPS28-203ENST00000600659 SUN5Q8TC36 379 aa11.2□□□□□ -0.62
RPS28-203ENST00000600659 RNASE8Q8TDE3 154 aaKnown RBP11.2□□□□□ -0.62
RPS28-203ENST00000600659 RAB24Q969Q5 203 aa11.2□□□□□ -0.62
RPS28-203ENST00000600659 H7BYZ3 331 aa11.19□□□□□ -0.62
RPS28-203ENST00000600659 J3KRW8 73 aa11.19□□□□□ -0.62
RPS28-203ENST00000600659 LEPP41159 167 aa11.19□□□□□ -0.62
RPS28-203ENST00000600659 ZNF726P1Q15940 193 aa11.19□□□□□ -0.62
RPS28-203ENST00000600659 C2CD4CQ8TF44 421 aa11.19□□□□□ -0.62
RPS28-203ENST00000600659 LINC00477Q96M19 166 aa11.19□□□□□ -0.62
RPS28-203ENST00000600659 LINC01587Q99440 93 aa11.19□□□□□ -0.62
RPS28-203ENST00000600659 ZNF492Q9P255 531 aa11.19□□□□□ -0.62
RPS28-203ENST00000600659 APLNQ9ULZ1 77 aa11.19□□□□□ -0.62
RPS28-203ENST00000600659 DIRC3C9JPN6 131 aa11.18□□□□□ -0.62
RPS28-203ENST00000600659 ZNF324O75467 553 aaPredicted RBP11.18□□□□□ -0.62
RPS28-203ENST00000600659 CD300CQ08708 224 aa11.18□□□□□ -0.62
RPS28-203ENST00000600659 BTN1A1Q13410 526 aa11.18□□□□□ -0.62
RPS28-203ENST00000600659 ZNF345Q14585 488 aa11.18□□□□□ -0.62
RPS28-203ENST00000600659 Q6ZQT7 251 aa11.18□□□□□ -0.62
RPS28-203ENST00000600659 KCNRGQ8N5I3 272 aa11.18□□□□□ -0.62
RPS28-203ENST00000600659 Q8TAT8 98 aa11.18□□□□□ -0.62
RPS28-203ENST00000600659 NIPSNAP3BQ9BS92 247 aa11.18□□□□□ -0.62
RPS28-203ENST00000600659 OTORQ9NRC9 128 aa11.18□□□□□ -0.62
RPS28-203ENST00000600659 EPPK1P58107 5090 aaKnown RBP11.17□□□□□ -0.62
RPS28-203ENST00000600659 BORCS7-ASMTA0A0B4J1R7 106 aa11.17□□□□□ -0.62
RPS28-203ENST00000600659 TRAV12-3A0A0B4J271 114 aa11.17□□□□□ -0.62
RPS28-203ENST00000600659 TEX48A0A1B0GUV7 120 aa11.17□□□□□ -0.62
RPS28-203ENST00000600659 RBAKDNA6NC62 111 aa11.17□□□□□ -0.62
RPS28-203ENST00000600659 HMSDA8MTL9 139 aa11.17□□□□□ -0.62
RPS28-203ENST00000600659 TAAR5O14804 337 aa11.17□□□□□ -0.62
RPS28-203ENST00000600659 SLC25A5P05141 298 aaKnown RBP11.17□□□□□ -0.62
RPS28-203ENST00000600659 GNPNAT1Q96EK6 184 aaPredicted RBP11.17□□□□□ -0.62
RPS28-203ENST00000600659 ST6GAL2Q96JF0 529 aa11.17□□□□□ -0.62
RPS28-203ENST00000600659 DEFB131BA0A096LNP1 70 aa11.16□□□□□ -0.62
RPS28-203ENST00000600659 C7orf71A4D174 169 aa11.16□□□□□ -0.62
RPS28-203ENST00000600659 IGLL5B9A064 214 aa11.16□□□□□ -0.62
RPS28-203ENST00000600659 MBP02144 154 aa11.16□□□□□ -0.62
RPS28-203ENST00000600659 GCHFRP30047 84 aa11.16□□□□□ -0.62
RPS28-203ENST00000600659 Q6ZNX1 250 aa11.16□□□□□ -0.62
RPS28-203ENST00000600659 TMEM263Q8WUH6 116 aaKnown RBP11.16□□□□□ -0.62
RPS28-203ENST00000600659 C16orf74Q96GX8 76 aa11.16□□□□□ -0.62
RPS28-203ENST00000600659 DNAH10Q8IVF4 4471 aa11.16□□□□□ -0.62
RPS28-203ENST00000600659 IGHV4-4A0A075B6R2 117 aa11.15□□□□□ -0.62
RPS28-203ENST00000600659 PGPA6NDG6 321 aa11.15□□□□□ -0.62
RPS28-203ENST00000600659 LYRM9A8MSI8 78 aa11.15□□□□□ -0.62
RPS28-203ENST00000600659 NMBP08949 121 aa11.15□□□□□ -0.62
RPS28-203ENST00000600659 HTN1P15515 57 aa11.15□□□□□ -0.62
RPS28-203ENST00000600659 TMEM78Q5T7P6 136 aa11.15□□□□□ -0.62
RPS28-203ENST00000600659 TRBV7-9A0A0J9YWB2 115 aa11.14□□□□□ -0.63
RPS28-203ENST00000600659 ZNF138P52744 262 aa11.14□□□□□ -0.63
RPS28-203ENST00000600659 TCTAP57738 103 aa11.14□□□□□ -0.63
RPS28-203ENST00000600659 GNG5P63218 68 aa11.14□□□□□ -0.63
RPS28-203ENST00000600659 LGALS9CQ6DKI2 356 aa11.14□□□□□ -0.63
RPS28-203ENST00000600659 ZNF493Q6ZR52 646 aa11.14□□□□□ -0.63
RPS28-203ENST00000600659 LINC00612Q8N6U2 182 aa11.14□□□□□ -0.63
RPS28-203ENST00000600659 LINC00467Q9BRT7 94 aa11.14□□□□□ -0.63
RPS28-203ENST00000600659 ACTR3CQ9C0K3 210 aaPredicted RBP11.14□□□□□ -0.63
RPS28-203ENST00000600659 CTXND1A0A1B0GTU2 59 aa11.13□□□□□ -0.63
RPS28-203ENST00000600659 GGTLC3B5MD39 225 aa11.13□□□□□ -0.63
RPS28-203ENST00000600659 LY6G6CO95867 125 aa11.13□□□□□ -0.63
RPS28-203ENST00000600659 CSN1S1P47710 185 aa11.13□□□□□ -0.63
RPS28-203ENST00000600659 ARL6IP6Q8N6S5 226 aa11.13□□□□□ -0.63
RPS28-203ENST00000600659 C11orf72Q8NBR9 251 aa11.13□□□□□ -0.63
RPS28-203ENST00000600659 RXFP4Q8TDU9 374 aa11.13□□□□□ -0.63
RPS28-203ENST00000600659 TMED6Q8WW62 240 aa11.13□□□□□ -0.63
RPS28-203ENST00000600659 HYLS1Q96M11 299 aa11.13□□□□□ -0.63
RPS28-203ENST00000600659 ARPC5LQ9BPX5 153 aa11.13□□□□□ -0.63
RPS28-203ENST00000600659 PYGO2Q9BRQ0 406 aa11.13□□□□□ -0.63
RPS28-203ENST00000600659 CXorf1O96002 111 aa11.12□□□□□ -0.63
RPS28-203ENST00000600659 DAD1P61803 113 aa11.12□□□□□ -0.63
RPS28-203ENST00000600659 TVP23CQ96ET8 276 aa11.12□□□□□ -0.63
RPS28-203ENST00000600659 NOP10Q9NPE3 64 aaKnown RBP11.12□□□□□ -0.63
RPS28-203ENST00000600659 DNAH2Q9P225 4427 aa11.12□□□□□ -0.63
RPS28-203ENST00000600659 FRAS1Q86XX4 4008 aa11.12□□□□□ -0.63
RPS28-203ENST00000600659 TRAV8-1A0A0A6YYK1 113 aa11.11□□□□□ -0.63
RPS28-203ENST00000600659 BCL2L11O43521 198 aa11.11□□□□□ -0.63
RPS28-203ENST00000600659 GPX1P07203 203 aa11.11□□□□□ -0.63
RPS28-203ENST00000600659 RNASE4P34096 147 aaKnown RBP11.11□□□□□ -0.63
RPS28-203ENST00000600659 GOLT1AQ6ZVE7 132 aa11.11□□□□□ -0.63
RPS28-203ENST00000600659 TMPRSS5Q9H3S3 457 aa11.11□□□□□ -0.63
RPS28-203ENST00000600659 RPH3ALQ9UNE2 315 aa11.11□□□□□ -0.63
RPS28-203ENST00000600659 TIMM8BQ9Y5J9 83 aaPredicted RBP11.11□□□□□ -0.63
RPS28-203ENST00000600659 LENEPQ9Y5L5 61 aa11.11□□□□□ -0.63
RPS28-203ENST00000600659 A0A0D9SG52 128 aa11.1□□□□□ -0.63
RPS28-203ENST00000600659 FHITP49789 147 aa11.1□□□□□ -0.63
RPS28-203ENST00000600659 ANXA2RQ3ZCQ2 193 aa11.1□□□□□ -0.63
RPS28-203ENST00000600659 AKR1C8PQ5T2L2 129 aa11.1□□□□□ -0.63
RPS28-203ENST00000600659 TCTE3Q8IZS6 198 aa11.1□□□□□ -0.63
RPS28-203ENST00000600659 TMEM167BQ9NRX6 74 aa11.1□□□□□ -0.63
RPS28-203ENST00000600659 TP53TG3Q9ULZ0 132 aa11.1□□□□□ -0.63
RPS28-203ENST00000600659 NACAE9PAV3 2078 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms