RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, human

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP4-208	ENST00000600628		H7BYZ3	331 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	SPART-AS1	P0CW21	52 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	EMP1	P54849	157 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	RAB2A	P61019	212 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	ICAM4	Q14773	271 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	ACOT6	Q3I5F7	207 aa	Predicted RBP	6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	ZFP69	Q49AA0	526 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	KHDC3L	Q587J8	217 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	FAM222A	Q5U5X8	452 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	RPL7L1	Q6DKI1	246 aa	Known RBP	6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	ZNF493	Q6ZR52	646 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	OR11H4	Q8NGC9	324 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	BLNK	Q8WV28	456 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	VGLL1	Q99990	258 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	ZNF492	Q9P255	531 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	YTHDF2	Q9Y5A9	579 aa	Known RBP	6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	PKHD1	P08F94	4074 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	PKD1	P98161	4303 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	MUC4	Q99102	2169 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	DEFB131B	A0A096LNP1	70 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	LYRM9	A8MSI8	78 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	HMSD	A8MTL9	139 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	ZNF705G	A8MUZ8	300 aa	Predicted RBP	6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	OR7C2	O60412	319 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	OR10J4	P0C629	311 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	TAS2R45	P59539	299 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	ERCC8	Q13216	396 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	ZNF345	Q14585	488 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	PRR9	Q5T870	116 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	ZNF767P	Q75MW2	155 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	SSX7	Q7RTT5	188 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	INO80E	Q8NBZ0	244 aa	Predicted RBP	6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	TMEM263	Q8WUH6	116 aa	Known RBP	6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	TMED6	Q8WW62	240 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	RAB24	Q969Q5	203 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	NIPSNAP3B	Q9BS92	247 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	SH3BGRL3	Q9H299	93 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628		Q9H3A6	140 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	AAMDC	Q9H7C9	122 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	LENEP	Q9Y5L5	61 aa		6.22	□□□□□ -1.41
SSBP4-208	ENST00000600628	NACA	E9PAV3	2078 aa		6.21	□□□□□ -1.41
SSBP4-208	ENST00000600628	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	FXYD6-FXYD2	A0A087WZ82	144 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	DIRC3	C9JPN6	131 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	TAAR5	O14804	337 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	ATP6V1G1	O75348	118 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	EIF3G	O75821	320 aa	Known RBP eCLIP	6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	IGKV2D-40	P01614	121 aa	Predicted RBP	6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	LEP	P41159	167 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	RAN	P62826	216 aa	Known RBP	6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	UBE2L3	P68036	154 aa	Known RBP	6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	CD300C	Q08708	224 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	ZNF726P1	Q15940	193 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	HSD17B11	Q8NBQ5	300 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	C11orf72	Q8NBR9	251 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	OR10G4	Q8NGN3	311 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	OR10G9	Q8NGN4	311 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	OR10G7	Q8NGN6	311 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	GNPNAT1	Q96EK6	184 aa	Predicted RBP	6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	C16orf74	Q96GX8	76 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	FAM210B	Q96KR6	192 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	PYGO2	Q9BRQ0	406 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	TMEM208	Q9BTX3	173 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	OTOR	Q9NRC9	128 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	PLA2G2E	Q9NZK7	142 aa		6.21	□□□□□ -1.42
SSBP4-208	ENST00000600628	IGHV4-4	A0A075B6R2	117 aa		6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	C7orf71	A4D174	169 aa		6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	RGS13	O14921	159 aa		6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	MB	P02144	154 aa		6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	ARL14EPL	P0DKL9	152 aa		6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	CDC34	P49427	236 aa	Predicted RBP	6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	DAZ2	Q13117	558 aa	Known RBP	6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	ANXA2R	Q3ZCQ2	193 aa		6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	FAM122C	Q6P4D5	195 aa		6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	TCTE3	Q8IZS6	198 aa		6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	KCNRG	Q8N5I3	272 aa		6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	ST6GAL2	Q96JF0	529 aa		6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	C18orf15	Q96N68	181 aa		6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	LINC01587	Q99440	93 aa		6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	TP53TG3	Q9ULZ0	132 aa		6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	DNAH11	Q96DT5	4516 aa		6.2	□□□□□ -1.42
SSBP4-208	ENST00000600628	TRAV12-3	A0A0B4J271	114 aa		6.19	□□□□□ -1.42
SSBP4-208	ENST00000600628		A0A1W2PPV4	95 aa		6.19	□□□□□ -1.42
SSBP4-208	ENST00000600628	SMLR1	H3BR10	107 aa		6.19	□□□□□ -1.42
SSBP4-208	ENST00000600628	IGLV2-11	P01706	119 aa		6.19	□□□□□ -1.42
SSBP4-208	ENST00000600628	GCHFR	P30047	84 aa		6.19	□□□□□ -1.42
SSBP4-208	ENST00000600628	ZNF138	P52744	262 aa		6.19	□□□□□ -1.42
SSBP4-208	ENST00000600628	TDRG1	Q3Y452	100 aa		6.19	□□□□□ -1.42
SSBP4-208	ENST00000600628		Q6AWC8	147 aa		6.19	□□□□□ -1.42
SSBP4-208	ENST00000600628		Q6ZQT7	251 aa		6.19	□□□□□ -1.42
SSBP4-208	ENST00000600628	RXFP4	Q8TDU9	374 aa		6.19	□□□□□ -1.42
SSBP4-208	ENST00000600628	TVP23C	Q96ET8	276 aa		6.19	□□□□□ -1.42
SSBP4-208	ENST00000600628	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	6.19	□□□□□ -1.42
SSBP4-208	ENST00000600628	BIRC6	Q9NR09	4857 aa		6.18	□□□□□ -1.42
SSBP4-208	ENST00000600628	BORCS7-ASMT	A0A0B4J1R7	106 aa		6.18	□□□□□ -1.42
SSBP4-208	ENST00000600628		A0A1W2PRE2	83 aa		6.18	□□□□□ -1.42
SSBP4-208	ENST00000600628	GGTLC3	B5MD39	225 aa		6.18	□□□□□ -1.42
SSBP4-208	ENST00000600628	ARPC5	O15511	151 aa		6.18	□□□□□ -1.42
SSBP4-208	ENST00000600628	S100A1	P23297	94 aa		6.18	□□□□□ -1.42
SSBP4-208	ENST00000600628	BTN1A1	Q13410	526 aa		6.18	□□□□□ -1.42

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