RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 IMMP2LQ96T52 175 aa9.66□□□□□ -0.86
ZNF548-210ENST00000600442 MS4A6AQ9H2W1 248 aa9.66□□□□□ -0.86
ZNF548-210ENST00000600442 IGKV3-7A0A075B6H7 116 aa9.65□□□□□ -0.86
ZNF548-210ENST00000600442 OR4C46A6NHA9 309 aa9.65□□□□□ -0.86
ZNF548-210ENST00000600442 GCGP01275 180 aa9.65□□□□□ -0.86
ZNF548-210ENST00000600442 RNF212Q495C1 297 aa9.65□□□□□ -0.86
ZNF548-210ENST00000600442 Q86TA4 180 aa9.65□□□□□ -0.86
ZNF548-210ENST00000600442 LINC00477Q96M19 166 aa9.65□□□□□ -0.86
ZNF548-210ENST00000600442 OSTCQ9NRP0 149 aa9.65□□□□□ -0.86
ZNF548-210ENST00000600442 LENEPQ9Y5L5 61 aa9.65□□□□□ -0.86
ZNF548-210ENST00000600442 TRBV20OR9-2A0A075B6H5 130 aa9.64□□□□□ -0.87
ZNF548-210ENST00000600442 SCO1O75880 301 aa9.64□□□□□ -0.87
ZNF548-210ENST00000600442 CSN3P07498 182 aa9.64□□□□□ -0.87
ZNF548-210ENST00000600442 ZNF138P52744 262 aa9.64□□□□□ -0.87
ZNF548-210ENST00000600442 IBA57Q5T440 356 aaKnown RBP9.64□□□□□ -0.87
ZNF548-210ENST00000600442 EBLN2Q6P2I7 272 aa9.64□□□□□ -0.87
ZNF548-210ENST00000600442 TMEM88Q6PEY1 159 aa9.64□□□□□ -0.87
ZNF548-210ENST00000600442 WFDC3Q8IUB2 231 aa9.64□□□□□ -0.87
ZNF548-210ENST00000600442 GBGT1Q8N5D6 347 aa9.64□□□□□ -0.87
ZNF548-210ENST00000600442 RNF182Q8N6D2 247 aa9.64□□□□□ -0.87
ZNF548-210ENST00000600442 OR2K2Q8NGT1 345 aa9.64□□□□□ -0.87
ZNF548-210ENST00000600442 DUX3Q96PT4 197 aa9.64□□□□□ -0.87
ZNF548-210ENST00000600442 PPP1R14DQ9NXH3 145 aa9.64□□□□□ -0.87
ZNF548-210ENST00000600442 PRKDCP78527 4128 aaKnown RBP9.63□□□□□ -0.87
ZNF548-210ENST00000600442 TRAV8-2A0A0B4J237 113 aa9.63□□□□□ -0.87
ZNF548-210ENST00000600442 XKRY2A2RUG3 117 aa9.63□□□□□ -0.87
ZNF548-210ENST00000600442 DUSP14O95147 198 aaKnown RBP9.63□□□□□ -0.87
ZNF548-210ENST00000600442 P01737 135 aa9.63□□□□□ -0.87
ZNF548-210ENST00000600442 PRR27Q6MZM9 219 aa9.63□□□□□ -0.87
ZNF548-210ENST00000600442 FAM231DQ6ZW35 169 aa9.63□□□□□ -0.87
ZNF548-210ENST00000600442 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.63□□□□□ -0.87
ZNF548-210ENST00000600442 SPAG8Q99932 426 aaPredicted RBP9.63□□□□□ -0.87
ZNF548-210ENST00000600442 AURKAIP1Q9NWT8 199 aaPredicted RBP9.63□□□□□ -0.87
ZNF548-210ENST00000600442 IGKV2-40A0A087WW87 121 aaPredicted RBP9.62□□□□□ -0.87
ZNF548-210ENST00000600442 PGPEP1LA6NFU8 196 aa9.62□□□□□ -0.87
ZNF548-210ENST00000600442 ZNF705GA8MUZ8 300 aaPredicted RBP9.62□□□□□ -0.87
ZNF548-210ENST00000600442 ZNF705FA8MVS1 300 aaPredicted RBP9.62□□□□□ -0.87
ZNF548-210ENST00000600442 K7EQG2 157 aa9.62□□□□□ -0.87
ZNF548-210ENST00000600442 SOCS3O14543 225 aa9.62□□□□□ -0.87
ZNF548-210ENST00000600442 GATCO43716 136 aaKnown RBP9.62□□□□□ -0.87
ZNF548-210ENST00000600442 IGKV2D-40P01614 121 aaPredicted RBP9.62□□□□□ -0.87
ZNF548-210ENST00000600442 TFPI2P48307 235 aa9.62□□□□□ -0.87
ZNF548-210ENST00000600442 DEFB114Q30KQ6 69 aa9.62□□□□□ -0.87
ZNF548-210ENST00000600442 SMUG1Q53HV7 270 aa9.62□□□□□ -0.87
ZNF548-210ENST00000600442 IGFL4Q6B9Z1 124 aa9.62□□□□□ -0.87
ZNF548-210ENST00000600442 C9orf47Q6ZRZ4 202 aa9.62□□□□□ -0.87
ZNF548-210ENST00000600442 CBLN2Q8IUK8 224 aa9.62□□□□□ -0.87
ZNF548-210ENST00000600442 DCANP1Q8TF63 244 aa9.62□□□□□ -0.87
ZNF548-210ENST00000600442 SGK494Q96LW2 274 aa9.62□□□□□ -0.87
ZNF548-210ENST00000600442 ZNF492Q9P255 531 aa9.62□□□□□ -0.87
ZNF548-210ENST00000600442 CMYA5Q8N3K9 4069 aa9.62□□□□□ -0.87
ZNF548-210ENST00000600442 TRAV8-1A0A0A6YYK1 113 aa9.61□□□□□ -0.87
ZNF548-210ENST00000600442 TRBV7-9A0A0J9YWB2 115 aa9.61□□□□□ -0.87
ZNF548-210ENST00000600442 SAP30O75446 220 aa9.61□□□□□ -0.87
ZNF548-210ENST00000600442 IGLV2-11P01706 119 aa9.61□□□□□ -0.87
ZNF548-210ENST00000600442 INSL3P51460 131 aa9.61□□□□□ -0.87
ZNF548-210ENST00000600442 PSMG4Q5JS54 123 aa9.61□□□□□ -0.87
ZNF548-210ENST00000600442 FAM162BQ5T6X4 162 aa9.61□□□□□ -0.87
ZNF548-210ENST00000600442 NHLRC2Q8NBF2 726 aa9.61□□□□□ -0.87
ZNF548-210ENST00000600442 OR4B1Q8NGF8 309 aa9.61□□□□□ -0.87
ZNF548-210ENST00000600442 PRR25Q96S07 402 aa9.61□□□□□ -0.87
ZNF548-210ENST00000600442 ASCL2Q99929 193 aa9.61□□□□□ -0.87
ZNF548-210ENST00000600442 MCRIP2Q9BUT9 160 aaKnown RBP9.61□□□□□ -0.87
ZNF548-210ENST00000600442 MLST8Q9BVC4 326 aa9.61□□□□□ -0.87
ZNF548-210ENST00000600442 TRAV9-1A0A075B6T8 112 aa9.6□□□□□ -0.87
ZNF548-210ENST00000600442 A8MWL6 223 aa9.6□□□□□ -0.87
ZNF548-210ENST00000600442 K7EN84 100 aa9.6□□□□□ -0.87
ZNF548-210ENST00000600442 ZNF688P0C7X2 276 aa9.6□□□□□ -0.87
ZNF548-210ENST00000600442 HLA-DMBP28068 263 aa9.6□□□□□ -0.87
ZNF548-210ENST00000600442 TSPOP30536 169 aa9.6□□□□□ -0.87
ZNF548-210ENST00000600442 RPS20P60866 119 aaKnown RBP9.6□□□□□ -0.87
ZNF548-210ENST00000600442 HIST1H1AQ02539 215 aaPredicted RBP9.6□□□□□ -0.87
ZNF548-210ENST00000600442 OR5I1Q13606 314 aa9.6□□□□□ -0.87
ZNF548-210ENST00000600442 CT83Q5H943 113 aa9.6□□□□□ -0.87
ZNF548-210ENST00000600442 COX8CQ7Z4L0 72 aa9.6□□□□□ -0.87
ZNF548-210ENST00000600442 OR8A1Q8NGG7 326 aa9.6□□□□□ -0.87
ZNF548-210ENST00000600442 CITED1Q99966 193 aa9.6□□□□□ -0.87
ZNF548-210ENST00000600442 VGLL1Q99990 258 aa9.6□□□□□ -0.87
ZNF548-210ENST00000600442 ADARB2-AS1A8MUL3 147 aa9.59□□□□□ -0.87
ZNF548-210ENST00000600442 FABP5P3A8MUU1 101 aa9.59□□□□□ -0.87
ZNF548-210ENST00000600442 NPIPB6E9PJ23 425 aa9.59□□□□□ -0.87
ZNF548-210ENST00000600442 IGLV2-8P01709 118 aa9.59□□□□□ -0.87
ZNF548-210ENST00000600442 FOXI2Q6ZQN5 318 aa9.59□□□□□ -0.87
ZNF548-210ENST00000600442 RPP21Q9H633 154 aaKnown RBP9.59□□□□□ -0.87
ZNF548-210ENST00000600442 IL36BQ9NZH7 164 aa9.59□□□□□ -0.87
ZNF548-210ENST00000600442 LEPP41159 167 aa9.58□□□□□ -0.88
ZNF548-210ENST00000600442 ERCC8Q13216 396 aa9.58□□□□□ -0.88
ZNF548-210ENST00000600442 CD300EQ496F6 205 aaPredicted RBP9.58□□□□□ -0.88
ZNF548-210ENST00000600442 TMEM61Q8N0U2 210 aa9.58□□□□□ -0.88
ZNF548-210ENST00000600442 FAM24BQ8N5W8 94 aa9.58□□□□□ -0.88
ZNF548-210ENST00000600442 NUDT10Q8NFP7 164 aa9.58□□□□□ -0.88
ZNF548-210ENST00000600442 BORCS7Q96B45 105 aa9.58□□□□□ -0.88
ZNF548-210ENST00000600442 NUDT11Q96G61 164 aa9.58□□□□□ -0.88
ZNF548-210ENST00000600442 C20orf173Q96LM9 149 aa9.58□□□□□ -0.88
ZNF548-210ENST00000600442 ODF3Q96PU9 254 aa9.58□□□□□ -0.88
ZNF548-210ENST00000600442 GPR61Q9BZJ8 451 aa9.58□□□□□ -0.88
ZNF548-210ENST00000600442 AGPAT4-IT1Q9H0P7 198 aa9.58□□□□□ -0.88
ZNF548-210ENST00000600442 RNASE7Q9H1E1 156 aaKnown RBP9.58□□□□□ -0.88
ZNF548-210ENST00000600442 SAV1Q9H4B6 383 aaPredicted RBP9.58□□□□□ -0.88
ZNF548-210ENST00000600442 URGCP-MRPS24S4R325 110 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms