RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 SSTP61278 116 aa11.06□□□□□ -0.64
VRK3-217ENST00000599538 ARL6IP6Q8N6S5 226 aa11.06□□□□□ -0.64
VRK3-217ENST00000599538 TPPP3Q9BW30 176 aa11.06□□□□□ -0.64
VRK3-217ENST00000599538 KMT2BQ9UMN6 2715 aaPredicted RBP11.06□□□□□ -0.64
VRK3-217ENST00000599538 NDUFA4O00483 81 aa11.05□□□□□ -0.64
VRK3-217ENST00000599538 COX8CQ7Z4L0 72 aa11.05□□□□□ -0.64
VRK3-217ENST00000599538 GPHB5Q86YW7 130 aa11.05□□□□□ -0.64
VRK3-217ENST00000599538 SONP18583 2426 aaKnown RBP11.05□□□□□ -0.64
VRK3-217ENST00000599538 SAPCD1Q5SSQ6 148 aa11.05□□□□□ -0.64
VRK3-217ENST00000599538 SLC50A1Q9BRV3 221 aa11.05□□□□□ -0.64
VRK3-217ENST00000599538 PRO1933Q9H354 126 aa11.05□□□□□ -0.64
VRK3-217ENST00000599538 MUC21A0A0G2JKD1 596 aa11.04□□□□□ -0.64
VRK3-217ENST00000599538 MUC21A0A140T8X8 626 aa11.04□□□□□ -0.64
VRK3-217ENST00000599538 HAX1O00165 279 aa11.04□□□□□ -0.64
VRK3-217ENST00000599538 GPX1P07203 203 aa11.04□□□□□ -0.64
VRK3-217ENST00000599538 MUC21Q5SSG8 566 aa11.04□□□□□ -0.64
VRK3-217ENST00000599538 FAM162BQ5T6X4 162 aa11.04□□□□□ -0.64
VRK3-217ENST00000599538 IL17RELQ6ZVW7 336 aa11.04□□□□□ -0.64
VRK3-217ENST00000599538 LRRC75A-AS1Q8N1F1 130 aa11.04□□□□□ -0.64
VRK3-217ENST00000599538 FAM19A2Q8N3H0 131 aa11.04□□□□□ -0.64
VRK3-217ENST00000599538 SAMD10Q9BYL1 202 aa11.04□□□□□ -0.64
VRK3-217ENST00000599538 AGPAT4-IT1Q9H0P7 198 aa11.04□□□□□ -0.64
VRK3-217ENST00000599538 ZNF705DP0CH99 300 aaPredicted RBP11.03□□□□□ -0.64
VRK3-217ENST00000599538 ZNF705BP0CI00 300 aaPredicted RBP11.03□□□□□ -0.64
VRK3-217ENST00000599538 PSMB8P28062 276 aa11.03□□□□□ -0.64
VRK3-217ENST00000599538 PAFAH1B2P68402 229 aa11.03□□□□□ -0.64
VRK3-217ENST00000599538 TM4SF20Q53R12 229 aa11.03□□□□□ -0.64
VRK3-217ENST00000599538 DNLZQ5SXM8 178 aa11.03□□□□□ -0.64
VRK3-217ENST00000599538 C20orf173Q96LM9 149 aa11.03□□□□□ -0.64
VRK3-217ENST00000599538 HELZ2Q9BYK8 2649 aaKnown RBP11.03□□□□□ -0.64
VRK3-217ENST00000599538 A0A1B0GUT8 65 aa11.03□□□□□ -0.64
VRK3-217ENST00000599538 TMEM189A5PLL7 270 aa11.03□□□□□ -0.64
VRK3-217ENST00000599538 M0QZ24 198 aa11.03□□□□□ -0.64
VRK3-217ENST00000599538 PMCHP20382 165 aa11.03□□□□□ -0.64
VRK3-217ENST00000599538 DEFB1P60022 68 aa11.03□□□□□ -0.64
VRK3-217ENST00000599538 Q6YL49 198 aa11.03□□□□□ -0.64
VRK3-217ENST00000599538 KCNS1Q96KK3 526 aa11.03□□□□□ -0.64
VRK3-217ENST00000599538 DUX5Q96PT3 197 aa11.03□□□□□ -0.64
VRK3-217ENST00000599538 NPFFR1Q9GZQ6 430 aa11.03□□□□□ -0.64
VRK3-217ENST00000599538 HOXA3O43365 443 aaPredicted RBP11.02□□□□□ -0.64
VRK3-217ENST00000599538 SCGB1D1O95968 90 aa11.02□□□□□ -0.64
VRK3-217ENST00000599538 AMTP48728 403 aa11.02□□□□□ -0.64
VRK3-217ENST00000599538 LYZL1Q6UWQ5 148 aa11.02□□□□□ -0.64
VRK3-217ENST00000599538 Q6ZQT7 251 aa11.02□□□□□ -0.64
VRK3-217ENST00000599538 ZNF664Q8N3J9 261 aa11.02□□□□□ -0.64
VRK3-217ENST00000599538 URB1-AS1Q96HZ7 61 aa11.02□□□□□ -0.64
VRK3-217ENST00000599538 PSMG3-AS1Q96PY0 264 aa11.02□□□□□ -0.64
VRK3-217ENST00000599538 IGKV3-7A0A075B6H7 116 aa11.02□□□□□ -0.65
VRK3-217ENST00000599538 A0A0G2JLM5 398 aa11.02□□□□□ -0.65
VRK3-217ENST00000599538 KLF5Q13887 457 aaPredicted RBP11.02□□□□□ -0.65
VRK3-217ENST00000599538 C16orf92Q96LL3 132 aa11.02□□□□□ -0.65
VRK3-217ENST00000599538 VPREB3Q9UKI3 123 aa11.02□□□□□ -0.65
VRK3-217ENST00000599538 ZNF324O75467 553 aaPredicted RBP11.01□□□□□ -0.65
VRK3-217ENST00000599538 WFDC11Q8NEX6 87 aa11.01□□□□□ -0.65
VRK3-217ENST00000599538 FLNAP21333 2647 aaKnown RBP11□□□□□ -0.65
VRK3-217ENST00000599538 LOC102724200A0A096LPH7 203 aaPredicted RBP11□□□□□ -0.65
VRK3-217ENST00000599538 TMEM213A2RRL7 107 aa11□□□□□ -0.65
VRK3-217ENST00000599538 RBAKDNA6NC62 111 aa11□□□□□ -0.65
VRK3-217ENST00000599538 RPLP1P05386 114 aaKnown RBP11□□□□□ -0.65
VRK3-217ENST00000599538 C9orf139Q6ZV77 190 aa11□□□□□ -0.65
VRK3-217ENST00000599538 SIGLECL1Q8N7X8 197 aa11□□□□□ -0.65
VRK3-217ENST00000599538 NRN1Q9NPD7 142 aa11□□□□□ -0.65
VRK3-217ENST00000599538 PEF1Q9UBV8 284 aaKnown RBP11□□□□□ -0.65
VRK3-217ENST00000599538 FBLL1A6NHQ2 334 aaKnown RBP11□□□□□ -0.65
VRK3-217ENST00000599538 NTF3P20783 257 aa11□□□□□ -0.65
VRK3-217ENST00000599538 NIT1Q86X76 327 aa11□□□□□ -0.65
VRK3-217ENST00000599538 RHPN1-AS1Q9BWJ2 59 aa11□□□□□ -0.65
VRK3-217ENST00000599538 NAGKQ9UJ70 344 aa11□□□□□ -0.65
VRK3-217ENST00000599538 ZNF580Q9UK33 172 aa11□□□□□ -0.65
VRK3-217ENST00000599538 PDZD2O15018 2839 aa11□□□□□ -0.65
VRK3-217ENST00000599538 MYO9AB2RTY4 2548 aa10.99□□□□□ -0.65
VRK3-217ENST00000599538 ITPR2Q14571 2701 aa10.99□□□□□ -0.65
VRK3-217ENST00000599538 SOCS3O14543 225 aa10.99□□□□□ -0.65
VRK3-217ENST00000599538 SRD5A1P18405 259 aa10.99□□□□□ -0.65
VRK3-217ENST00000599538 ZNF702PQ9H963 129 aa10.99□□□□□ -0.65
VRK3-217ENST00000599538 C11orf21Q9P2W6 132 aa10.99□□□□□ -0.65
VRK3-217ENST00000599538 ORM1P02763 201 aa10.99□□□□□ -0.65
VRK3-217ENST00000599538 BMI1P35226 326 aa10.99□□□□□ -0.65
VRK3-217ENST00000599538 RPL11P62913 178 aaKnown RBP10.99□□□□□ -0.65
VRK3-217ENST00000599538 RIGQ13278 110 aa10.99□□□□□ -0.65
VRK3-217ENST00000599538 TDRG1Q3Y452 100 aa10.99□□□□□ -0.65
VRK3-217ENST00000599538 FAM209BQ5JX69 171 aa10.99□□□□□ -0.65
VRK3-217ENST00000599538 NDFIP1Q9BT67 221 aa10.99□□□□□ -0.65
VRK3-217ENST00000599538 IGHV7-4-1A0A0J9YVY3 117 aa10.98□□□□□ -0.65
VRK3-217ENST00000599538 FABP5P3A8MUU1 101 aa10.98□□□□□ -0.65
VRK3-217ENST00000599538 PLA2G2AP14555 144 aa10.98□□□□□ -0.65
VRK3-217ENST00000599538 ZNF138P52744 262 aa10.98□□□□□ -0.65
VRK3-217ENST00000599538 CYB5R2Q6BCY4 276 aa10.98□□□□□ -0.65
VRK3-217ENST00000599538 RNASEKQ6P5S7 137 aaKnown RBP10.98□□□□□ -0.65
VRK3-217ENST00000599538 MRPL53Q96EL3 112 aaKnown RBP10.98□□□□□ -0.65
VRK3-217ENST00000599538 KRTDAPP60985 99 aa10.97□□□□□ -0.65
VRK3-217ENST00000599538 PKIAP61925 76 aa10.97□□□□□ -0.65
VRK3-217ENST00000599538 PMCHL1Q16048 86 aa10.97□□□□□ -0.65
VRK3-217ENST00000599538 TMEM78Q5T7P6 136 aa10.97□□□□□ -0.65
VRK3-217ENST00000599538 ZNF738Q8NE65 137 aa10.97□□□□□ -0.65
VRK3-217ENST00000599538 DAZ1Q9NQZ3 744 aaKnown RBP10.97□□□□□ -0.65
VRK3-217ENST00000599538 ACANP16112 2415 aa10.97□□□□□ -0.65
VRK3-217ENST00000599538 IGKV3D-20A0A0C4DH25 116 aa10.97□□□□□ -0.65
VRK3-217ENST00000599538 F6UB75 175 aa10.97□□□□□ -0.65
VRK3-217ENST00000599538 IGLC6P0CF74 106 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms