RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 K7ENP7 123 aa9.75□□□□□ -0.85
USHBP1-207ENST00000597928 LTAP01374 205 aa9.75□□□□□ -0.85
USHBP1-207ENST00000597928 EMP1P54849 157 aa9.75□□□□□ -0.85
USHBP1-207ENST00000597928 DNLZQ5SXM8 178 aa9.75□□□□□ -0.85
USHBP1-207ENST00000597928 NDUFA3O95167 84 aa9.74□□□□□ -0.85
USHBP1-207ENST00000597928 GTSCR1Q86UQ5 136 aa9.74□□□□□ -0.85
USHBP1-207ENST00000597928 EGR2P11161 476 aaPredicted RBP9.74□□□□□ -0.85
USHBP1-207ENST00000597928 MTURNQ8N3F0 131 aa9.74□□□□□ -0.85
USHBP1-207ENST00000597928 MRPL27Q9P0M9 148 aaKnown RBP9.74□□□□□ -0.85
USHBP1-207ENST00000597928 ZNF462Q96JM2 2506 aa9.74□□□□□ -0.85
USHBP1-207ENST00000597928 CCL25O15444 150 aa9.74□□□□□ -0.85
USHBP1-207ENST00000597928 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.74□□□□□ -0.85
USHBP1-207ENST00000597928 RNASE8Q8TDE3 154 aaKnown RBP9.74□□□□□ -0.85
USHBP1-207ENST00000597928 NPYP01303 97 aa9.73□□□□□ -0.85
USHBP1-207ENST00000597928 Q6ZQT7 251 aa9.73□□□□□ -0.85
USHBP1-207ENST00000597928 LINC00311Q8N616 119 aa9.73□□□□□ -0.85
USHBP1-207ENST00000597928 GAGE10A6NGK3 116 aa9.73□□□□□ -0.85
USHBP1-207ENST00000597928 F6UB75 175 aa9.73□□□□□ -0.85
USHBP1-207ENST00000597928 PVRIGQ6DKI7 326 aa9.73□□□□□ -0.85
USHBP1-207ENST00000597928 SIGLEC15Q6ZMC9 328 aa9.73□□□□□ -0.85
USHBP1-207ENST00000597928 FAM231DQ6ZW35 169 aa9.73□□□□□ -0.85
USHBP1-207ENST00000597928 METTL26Q96S19 204 aa9.73□□□□□ -0.85
USHBP1-207ENST00000597928 NCOR1P1Q9H4R4 102 aa9.73□□□□□ -0.85
USHBP1-207ENST00000597928 KLRB1Q12918 225 aa9.73□□□□□ -0.85
USHBP1-207ENST00000597928 NRGNQ92686 78 aa9.73□□□□□ -0.85
USHBP1-207ENST00000597928 CHODLQ9H9P2 273 aa9.73□□□□□ -0.85
USHBP1-207ENST00000597928 SIGLEC8Q9NYZ4 499 aa9.73□□□□□ -0.85
USHBP1-207ENST00000597928 GAS8-AS1O95177 125 aa9.72□□□□□ -0.85
USHBP1-207ENST00000597928 BMI1P35226 326 aa9.72□□□□□ -0.85
USHBP1-207ENST00000597928 NEGR1Q7Z3B1 354 aa9.72□□□□□ -0.85
USHBP1-207ENST00000597928 ATP5L2Q7Z4Y8 100 aa9.72□□□□□ -0.85
USHBP1-207ENST00000597928 WIPF2Q8TF74 440 aaPredicted RBP9.72□□□□□ -0.85
USHBP1-207ENST00000597928 MAP1LC3AQ9H492 121 aa9.72□□□□□ -0.85
USHBP1-207ENST00000597928 JKAMPQ9P055 326 aa9.72□□□□□ -0.85
USHBP1-207ENST00000597928 DKK2Q9UBU2 259 aa9.72□□□□□ -0.85
USHBP1-207ENST00000597928 CELSR1Q9NYQ6 3014 aa9.72□□□□□ -0.85
USHBP1-207ENST00000597928 HIVEP2P31629 2446 aa9.72□□□□□ -0.85
USHBP1-207ENST00000597928 MRPL51Q4U2R6 128 aaKnown RBP9.72□□□□□ -0.85
USHBP1-207ENST00000597928 ZNF502Q8TBZ5 544 aa9.72□□□□□ -0.85
USHBP1-207ENST00000597928 C2orf70A6NJV1 201 aa9.71□□□□□ -0.85
USHBP1-207ENST00000597928 TGFAP01135 160 aa9.71□□□□□ -0.85
USHBP1-207ENST00000597928 GNLYP22749 145 aa9.71□□□□□ -0.85
USHBP1-207ENST00000597928 RNASE4P34096 147 aaKnown RBP9.71□□□□□ -0.85
USHBP1-207ENST00000597928 CRIP1P50238 77 aa9.71□□□□□ -0.85
USHBP1-207ENST00000597928 ZNF80P51504 273 aaPredicted RBP9.71□□□□□ -0.85
USHBP1-207ENST00000597928 HIST2H2BDQ6DRA6 164 aa9.71□□□□□ -0.85
USHBP1-207ENST00000597928 IFI27L1Q96BM0 104 aa9.71□□□□□ -0.85
USHBP1-207ENST00000597928 KAAG1Q9UBP8 84 aa9.71□□□□□ -0.85
USHBP1-207ENST00000597928 TRAV30A0A087WSZ9 112 aa9.71□□□□□ -0.85
USHBP1-207ENST00000597928 PSG9Q00887 426 aa9.71□□□□□ -0.85
USHBP1-207ENST00000597928 Q8N976 141 aa9.71□□□□□ -0.85
USHBP1-207ENST00000597928 FN1P02751 2386 aaKnown RBP9.71□□□□□ -0.86
USHBP1-207ENST00000597928 FABP5P3A8MUU1 101 aa9.71□□□□□ -0.86
USHBP1-207ENST00000597928 H3BRN7 92 aa9.71□□□□□ -0.86
USHBP1-207ENST00000597928 PRTN3P24158 256 aa9.71□□□□□ -0.86
USHBP1-207ENST00000597928 ATP5G2Q06055 141 aa9.71□□□□□ -0.86
USHBP1-207ENST00000597928 SAPCD1Q5SSQ6 148 aa9.71□□□□□ -0.86
USHBP1-207ENST00000597928 ATP5J2P56134 94 aa9.7□□□□□ -0.86
USHBP1-207ENST00000597928 ANKRD39Q53RE8 183 aa9.7□□□□□ -0.86
USHBP1-207ENST00000597928 ZNF562Q6V9R5 426 aa9.7□□□□□ -0.86
USHBP1-207ENST00000597928 C12orf54Q6X4T0 127 aa9.7□□□□□ -0.86
USHBP1-207ENST00000597928 PCP2Q8IVA1 136 aa9.7□□□□□ -0.86
USHBP1-207ENST00000597928 PRR25Q96S07 402 aa9.7□□□□□ -0.86
USHBP1-207ENST00000597928 TNFRSF14Q92956 283 aa9.7□□□□□ -0.86
USHBP1-207ENST00000597928 FLNCQ14315 2725 aa9.7□□□□□ -0.86
USHBP1-207ENST00000597928 CRYBG3Q68DQ2 2970 aa9.7□□□□□ -0.86
USHBP1-207ENST00000597928 K7EP13 123 aa9.7□□□□□ -0.86
USHBP1-207ENST00000597928 RIPPLY3P57055 190 aa9.7□□□□□ -0.86
USHBP1-207ENST00000597928 URB1-AS1Q96HZ7 61 aa9.7□□□□□ -0.86
USHBP1-207ENST00000597928 FANCD2OSQ96PS1 177 aa9.7□□□□□ -0.86
USHBP1-207ENST00000597928 COX11Q9Y6N1 276 aa9.7□□□□□ -0.86
USHBP1-207ENST00000597928 ADORA2A-AS1P86434 159 aa9.69□□□□□ -0.86
USHBP1-207ENST00000597928 FOXE3Q13461 319 aa9.69□□□□□ -0.86
USHBP1-207ENST00000597928 LINC00477Q96M19 166 aa9.69□□□□□ -0.86
USHBP1-207ENST00000597928 PHLDA3Q9Y5J5 127 aa9.69□□□□□ -0.86
USHBP1-207ENST00000597928 CHCHD1Q96BP2 118 aaKnown RBP9.69□□□□□ -0.86
USHBP1-207ENST00000597928 EFNA4P52798 201 aa9.69□□□□□ -0.86
USHBP1-207ENST00000597928 TMEM95Q3KNT9 176 aa9.69□□□□□ -0.86
USHBP1-207ENST00000597928 C14orf178Q8N769 122 aaPredicted RBP9.69□□□□□ -0.86
USHBP1-207ENST00000597928 C11orf44Q8N8P7 122 aa9.69□□□□□ -0.86
USHBP1-207ENST00000597928 MYOZ3Q8TDC0 251 aa9.69□□□□□ -0.86
USHBP1-207ENST00000597928 TMEM158Q8WZ71 300 aa9.69□□□□□ -0.86
USHBP1-207ENST00000597928 MLST8Q9BVC4 326 aa9.69□□□□□ -0.86
USHBP1-207ENST00000597928 C7orf69Q9H7B7 122 aa9.69□□□□□ -0.86
USHBP1-207ENST00000597928 LINC00574Q9H8X3 128 aa9.69□□□□□ -0.86
USHBP1-207ENST00000597928 HBDP02042 147 aa9.68□□□□□ -0.86
USHBP1-207ENST00000597928 CRYGCP07315 174 aa9.68□□□□□ -0.86
USHBP1-207ENST00000597928 CTSGP08311 255 aa9.68□□□□□ -0.86
USHBP1-207ENST00000597928 C3orf36Q3SXR2 165 aa9.68□□□□□ -0.86
USHBP1-207ENST00000597928 C19orf71A6NCJ1 209 aa9.68□□□□□ -0.86
USHBP1-207ENST00000597928 H7C2G1 150 aa9.68□□□□□ -0.86
USHBP1-207ENST00000597928 IGF1P05019 195 aa9.68□□□□□ -0.86
USHBP1-207ENST00000597928 SFTPCP11686 197 aa9.68□□□□□ -0.86
USHBP1-207ENST00000597928 SCGB1D4Q6XE38 83 aa9.68□□□□□ -0.86
USHBP1-207ENST00000597928 NEU4Q8WWR8 484 aaPredicted RBP9.68□□□□□ -0.86
USHBP1-207ENST00000597928 NHP2Q9NX24 153 aaKnown RBP9.68□□□□□ -0.86
USHBP1-207ENST00000597928 IGHV7-81A0A0B4J1V7 117 aa9.67□□□□□ -0.86
USHBP1-207ENST00000597928 H3BUX3 64 aa9.67□□□□□ -0.86
USHBP1-207ENST00000597928 SMIM17P0DL12 118 aa9.67□□□□□ -0.86
USHBP1-207ENST00000597928 MRGPRG-AS1Q2M3A8 158 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms