RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 PLECQ15149 4684 aaKnown RBP13.1□□□□□ -0.31
ZNF558-204ENST00000596172 IGKV2-40A0A087WW87 121 aaPredicted RBP13.09□□□□□ -0.31
ZNF558-204ENST00000596172 CTXND1A0A1B0GTU2 59 aa13.09□□□□□ -0.31
ZNF558-204ENST00000596172 LOC102723971A0A1B0GUV8 181 aa13.09□□□□□ -0.31
ZNF558-204ENST00000596172 KANTRA0A1W2PQU2 76 aa13.09□□□□□ -0.31
ZNF558-204ENST00000596172 PGPA6NDG6 321 aa13.09□□□□□ -0.31
ZNF558-204ENST00000596172 H7BYZ3 331 aa13.09□□□□□ -0.31
ZNF558-204ENST00000596172 IGKV2D-40P01614 121 aaPredicted RBP13.09□□□□□ -0.31
ZNF558-204ENST00000596172 CRISP2P16562 243 aa13.09□□□□□ -0.31
ZNF558-204ENST00000596172 TAS2R60P59551 318 aa13.09□□□□□ -0.31
ZNF558-204ENST00000596172 GFI1BQ5VTD9 330 aa13.09□□□□□ -0.31
ZNF558-204ENST00000596172 LINC01587Q99440 93 aa13.09□□□□□ -0.31
ZNF558-204ENST00000596172 VGLL1Q99990 258 aa13.09□□□□□ -0.31
ZNF558-204ENST00000596172 TMEM167BQ9NRX6 74 aa13.09□□□□□ -0.31
ZNF558-204ENST00000596172 TEX48A0A1B0GUV7 120 aa13.08□□□□□ -0.32
ZNF558-204ENST00000596172 KLLNB2CW77 178 aa13.08□□□□□ -0.32
ZNF558-204ENST00000596172 DIRC3C9JPN6 131 aa13.08□□□□□ -0.32
ZNF558-204ENST00000596172 SEC11BP0C7V7 166 aa13.08□□□□□ -0.32
ZNF558-204ENST00000596172 SPART-AS1P0CW21 52 aa13.08□□□□□ -0.32
ZNF558-204ENST00000596172 EIF5AP63241 154 aaKnown RBP13.08□□□□□ -0.32
ZNF558-204ENST00000596172 KIR3DS1Q14943 382 aa13.08□□□□□ -0.32
ZNF558-204ENST00000596172 ZNF726P1Q15940 193 aa13.08□□□□□ -0.32
ZNF558-204ENST00000596172 TMUB2Q71RG4 321 aa13.08□□□□□ -0.32
ZNF558-204ENST00000596172 ZNF492Q9P255 531 aa13.08□□□□□ -0.32
ZNF558-204ENST00000596172 KLK5Q9Y337 293 aaPredicted RBP13.08□□□□□ -0.32
ZNF558-204ENST00000596172 ZNF705GA8MUZ8 300 aaPredicted RBP13.07□□□□□ -0.32
ZNF558-204ENST00000596172 C11orf94C9JXX5 98 aa13.07□□□□□ -0.32
ZNF558-204ENST00000596172 ZNF138P52744 262 aa13.07□□□□□ -0.32
ZNF558-204ENST00000596172 SSX7Q7RTT5 188 aa13.07□□□□□ -0.32
ZNF558-204ENST00000596172 CMTM2Q8TAZ6 248 aa13.07□□□□□ -0.32
ZNF558-204ENST00000596172 ZNF471Q9BX82 626 aaPredicted RBP13.07□□□□□ -0.32
ZNF558-204ENST00000596172 DKK2Q9UBU2 259 aa13.07□□□□□ -0.32
ZNF558-204ENST00000596172 CELA1Q9UNI1 258 aa13.07□□□□□ -0.32
ZNF558-204ENST00000596172 C1QBP02746 253 aa13.06□□□□□ -0.32
ZNF558-204ENST00000596172 EMP1P54849 157 aa13.06□□□□□ -0.32
ZNF558-204ENST00000596172 C12orf74Q32Q52 190 aa13.06□□□□□ -0.32
ZNF558-204ENST00000596172 ZNF493Q6ZR52 646 aa13.06□□□□□ -0.32
ZNF558-204ENST00000596172 TMED6Q8WW62 240 aa13.06□□□□□ -0.32
ZNF558-204ENST00000596172 HYLS1Q96M11 299 aa13.06□□□□□ -0.32
ZNF558-204ENST00000596172 LENEPQ9Y5L5 61 aa13.06□□□□□ -0.32
ZNF558-204ENST00000596172 SACSQ9NZJ4 4579 aa13.06□□□□□ -0.32
ZNF558-204ENST00000596172 UMAD1C9J7I0 102 aa13.05□□□□□ -0.32
ZNF558-204ENST00000596172 PFDN1O60925 122 aa13.05□□□□□ -0.32
ZNF558-204ENST00000596172 AKAP14Q86UN6 197 aa13.05□□□□□ -0.32
ZNF558-204ENST00000596172 ZFAND2AQ8N6M9 145 aa13.05□□□□□ -0.32
ZNF558-204ENST00000596172 YTHDF2Q9Y5A9 579 aaKnown RBP13.05□□□□□ -0.32
ZNF558-204ENST00000596172 TRAV12-3A0A0B4J271 114 aa13.04□□□□□ -0.32
ZNF558-204ENST00000596172 A0A1W2PRE2 83 aa13.04□□□□□ -0.32
ZNF558-204ENST00000596172 C7orf71A4D174 169 aa13.04□□□□□ -0.32
ZNF558-204ENST00000596172 ZNF324O75467 553 aaPredicted RBP13.04□□□□□ -0.32
ZNF558-204ENST00000596172 PRM2P04554 102 aa13.04□□□□□ -0.32
ZNF558-204ENST00000596172 AZU1P20160 251 aa13.04□□□□□ -0.32
ZNF558-204ENST00000596172 LGALSLQ3ZCW2 172 aaPredicted RBP13.04□□□□□ -0.32
ZNF558-204ENST00000596172 FAM222AQ5U5X8 452 aa13.04□□□□□ -0.32
ZNF558-204ENST00000596172 Q6ZTC4 211 aa13.04□□□□□ -0.32
ZNF558-204ENST00000596172 STOML3Q8TAV4 291 aa13.04□□□□□ -0.32
ZNF558-204ENST00000596172 PYGO2Q9BRQ0 406 aa13.04□□□□□ -0.32
ZNF558-204ENST00000596172 NIPSNAP3BQ9BS92 247 aa13.04□□□□□ -0.32
ZNF558-204ENST00000596172 TRAV10A0A0B4J240 114 aa13.03□□□□□ -0.32
ZNF558-204ENST00000596172 SERTM2A0A1B0GWG4 89 aa13.03□□□□□ -0.32
ZNF558-204ENST00000596172 PLAC8L1A1L4L8 177 aa13.03□□□□□ -0.32
ZNF558-204ENST00000596172 LYRM9A8MSI8 78 aa13.03□□□□□ -0.32
ZNF558-204ENST00000596172 J3KRW8 73 aa13.03□□□□□ -0.32
ZNF558-204ENST00000596172 GPX1P07203 203 aa13.03□□□□□ -0.32
ZNF558-204ENST00000596172 CD300CQ08708 224 aa13.03□□□□□ -0.32
ZNF558-204ENST00000596172 C5orf17Q8NAS9 161 aa13.03□□□□□ -0.32
ZNF558-204ENST00000596172 C16orf74Q96GX8 76 aa13.03□□□□□ -0.32
ZNF558-204ENST00000596172 LINC00467Q9BRT7 94 aa13.03□□□□□ -0.32
ZNF558-204ENST00000596172 PLA2G2EQ9NZK7 142 aa13.03□□□□□ -0.32
ZNF558-204ENST00000596172 hCG_2014768A0A024R1R8 64 aa13.02□□□□□ -0.33
ZNF558-204ENST00000596172 LCE6AA0A183 80 aa13.02□□□□□ -0.33
ZNF558-204ENST00000596172 TPT1P13693 172 aaKnown RBP13.02□□□□□ -0.33
ZNF558-204ENST00000596172 RNASE4P34096 147 aaKnown RBP13.02□□□□□ -0.33
ZNF558-204ENST00000596172 DPPA3Q6W0C5 159 aa13.02□□□□□ -0.33
ZNF558-204ENST00000596172 CCDC28AQ8IWP9 274 aa13.02□□□□□ -0.33
ZNF558-204ENST00000596172 RNASE8Q8TDE3 154 aaKnown RBP13.02□□□□□ -0.33
ZNF558-204ENST00000596172 C2CD4CQ8TF44 421 aa13.02□□□□□ -0.33
ZNF558-204ENST00000596172 TMEM263Q8WUH6 116 aaKnown RBP13.02□□□□□ -0.33
ZNF558-204ENST00000596172 LYSTQ99698 3801 aa13.02□□□□□ -0.33
ZNF558-204ENST00000596172 NKX6-2Q9C056 277 aaPredicted RBP13.02□□□□□ -0.33
ZNF558-204ENST00000596172 RYR3Q15413 4870 aa13.01□□□□□ -0.33
ZNF558-204ENST00000596172 MAP1LC3B2A6NCE7 125 aa13.01□□□□□ -0.33
ZNF558-204ENST00000596172 HTN1P15515 57 aa13.01□□□□□ -0.33
ZNF558-204ENST00000596172 TCTAP57738 103 aa13.01□□□□□ -0.33
ZNF558-204ENST00000596172 SUMO1P63165 101 aaKnown RBP13.01□□□□□ -0.33
ZNF558-204ENST00000596172 BTN1A1Q13410 526 aa13.01□□□□□ -0.33
ZNF558-204ENST00000596172 GOLT1AQ6ZVE7 132 aa13.01□□□□□ -0.33
ZNF558-204ENST00000596172 Q8TAT8 98 aa13.01□□□□□ -0.33
ZNF558-204ENST00000596172 MBD3L1Q8WWY6 194 aa13.01□□□□□ -0.33
ZNF558-204ENST00000596172 MAP1LC3BQ9GZQ8 125 aa13.01□□□□□ -0.33
ZNF558-204ENST00000596172 DNAH1Q9P2D7 4330 aa13.01□□□□□ -0.33
ZNF558-204ENST00000596172 GGTLC3B5MD39 225 aa13□□□□□ -0.33
ZNF558-204ENST00000596172 TCRAP04437 139 aa13□□□□□ -0.33
ZNF558-204ENST00000596172 FHITP49789 147 aa13□□□□□ -0.33
ZNF558-204ENST00000596172 IQCF2Q8IXL9 164 aa13□□□□□ -0.33
ZNF558-204ENST00000596172 TMPRSS5Q9H3S3 457 aa13□□□□□ -0.33
ZNF558-204ENST00000596172 EPDR1Q9UM22 224 aa13□□□□□ -0.33
ZNF558-204ENST00000596172 TIMM8BQ9Y5J9 83 aaPredicted RBP13□□□□□ -0.33
ZNF558-204ENST00000596172 K7EQM0 130 aa12.99□□□□□ -0.33
ZNF558-204ENST00000596172 FGF8P55075 233 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms