RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 GSN-AS1Q9NRJ2 163 aa7.22□□□□□ -1.25
SHKBP1-210ENST00000595874 MBD2Q9UBB5 411 aa7.22□□□□□ -1.25
SHKBP1-210ENST00000595874 FAT2Q9NYQ8 4349 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 TRAV26-1A0A087WT03 109 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 TRGV1A0A0A0MS02 117 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 C7orf71A4D174 169 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 PRAF2O60831 178 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 MPC2O95563 127 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 GPX1P07203 203 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 DEFA1P59665 94 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 DEFA3P59666 94 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 RANP62826 216 aaKnown RBP7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 MUC21Q5SSG8 566 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 HYLS1Q96M11 299 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 ATP5SQ99766 215 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 AAMDCQ9H7C9 122 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 MRPL16Q9NX20 251 aaKnown RBP7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 TMEM14CQ9P0S9 112 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 KLF12Q9Y4X4 402 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 HSPB11Q9Y547 144 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 HERC2O95714 4834 aa7.21□□□□□ -1.26
SHKBP1-210ENST00000595874 A0A1B0GVY2 172 aa7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 C17orf112F2Z3M2 114 aa7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 NBEAP1P0C6P0 100 aa7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 RPL12P30050 165 aaKnown RBP7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 UBE2L3P68036 154 aaKnown RBP7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 LGALS9BQ3B8N2 356 aa7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 ZNF575Q86XF7 245 aa7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 C15orf53Q8NAA6 179 aa7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 SCGB1C1Q8TD33 95 aa7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 FXYD5Q96DB9 178 aa7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 GNPNAT1Q96EK6 184 aaPredicted RBP7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 ZNF503Q96F45 646 aa7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 FAM210BQ96KR6 192 aa7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 MARVELD1Q9BSK0 173 aa7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 FUT9Q9Y231 359 aa7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 LINC00588Q9Y4M8 146 aa7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 ALG5Q9Y673 324 aa7.2□□□□□ -1.26
SHKBP1-210ENST00000595874 TRGV2A0A075B6R0 118 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 A0A096LPF7 62 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 RGS13O14921 159 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 MPDU1O75352 247 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 IFNA5P01569 189 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 SLC25A5P05141 298 aaKnown RBP7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 RAB2AP61019 212 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 TMEM78Q5T7P6 136 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 ZNF493Q6ZR52 646 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 Q6ZR54 194 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 LINC00299Q6ZSB3 139 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 LINC00336Q6ZUF6 198 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 SSX7Q7RTT5 188 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 SGK494Q96LW2 274 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 KRTAP17-1Q9BYP8 105 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 Q9H3A6 140 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 PRELID1Q9Y255 219 aa7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 DYNC1H1Q14204 4646 aaKnown RBP7.19□□□□□ -1.26
SHKBP1-210ENST00000595874 ZNF253O75346 499 aa7.18□□□□□ -1.26
SHKBP1-210ENST00000595874 GNG5P63218 68 aa7.18□□□□□ -1.26
SHKBP1-210ENST00000595874 CYCSP99999 105 aaKnown RBP7.18□□□□□ -1.26
SHKBP1-210ENST00000595874 RNF212Q495C1 297 aa7.18□□□□□ -1.26
SHKBP1-210ENST00000595874 C1orf134Q5TEV5 83 aa7.18□□□□□ -1.26
SHKBP1-210ENST00000595874 EIF4E3Q8N5X7 224 aaKnown RBP7.18□□□□□ -1.26
SHKBP1-210ENST00000595874 ZNRF2Q8NHG8 242 aa7.18□□□□□ -1.26
SHKBP1-210ENST00000595874 CHAC2Q8WUX2 184 aa7.18□□□□□ -1.26
SHKBP1-210ENST00000595874 MRPL53Q96EL3 112 aaKnown RBP7.18□□□□□ -1.26
SHKBP1-210ENST00000595874 LINC00477Q96M19 166 aa7.18□□□□□ -1.26
SHKBP1-210ENST00000595874 C20orf144Q9BQM9 153 aa7.18□□□□□ -1.26
SHKBP1-210ENST00000595874 PYGO2Q9BRQ0 406 aa7.18□□□□□ -1.26
SHKBP1-210ENST00000595874 NAGKQ9UJ70 344 aa7.18□□□□□ -1.26
SHKBP1-210ENST00000595874 F6UZH7 168 aa7.17□□□□□ -1.26
SHKBP1-210ENST00000595874 ZNF324O75467 553 aaPredicted RBP7.17□□□□□ -1.26
SHKBP1-210ENST00000595874 CCL18P55774 89 aa7.17□□□□□ -1.26
SHKBP1-210ENST00000595874 TNP2Q05952 138 aa7.17□□□□□ -1.26
SHKBP1-210ENST00000595874 ZFAND2AQ8N6M9 145 aa7.17□□□□□ -1.26
SHKBP1-210ENST00000595874 HSD17B11Q8NBQ5 300 aa7.17□□□□□ -1.26
SHKBP1-210ENST00000595874 C11orf72Q8NBR9 251 aa7.17□□□□□ -1.26
SHKBP1-210ENST00000595874 FAM19A4Q96LR4 140 aa7.17□□□□□ -1.26
SHKBP1-210ENST00000595874 ODF3Q96PU9 254 aa7.17□□□□□ -1.26
SHKBP1-210ENST00000595874 ARPC5LQ9BPX5 153 aa7.17□□□□□ -1.26
SHKBP1-210ENST00000595874 MRPL32Q9BYC8 188 aaKnown RBP7.17□□□□□ -1.26
SHKBP1-210ENST00000595874 ZNF492Q9P255 531 aa7.17□□□□□ -1.26
SHKBP1-210ENST00000595874 KIAA1109Q2LD37 5005 aa7.17□□□□□ -1.26
SHKBP1-210ENST00000595874 IGHV1OR15-1A0A075B7D0 117 aa7.16□□□□□ -1.26
SHKBP1-210ENST00000595874 NBDYA0A0U1RRE5 68 aa7.16□□□□□ -1.26
SHKBP1-210ENST00000595874 PGPA6NDG6 321 aa7.16□□□□□ -1.26
SHKBP1-210ENST00000595874 KLLNB2CW77 178 aa7.16□□□□□ -1.26
SHKBP1-210ENST00000595874 PET100P0DJ07 73 aa7.16□□□□□ -1.26
SHKBP1-210ENST00000595874 M6PRP20645 277 aa7.16□□□□□ -1.26
SHKBP1-210ENST00000595874 CSN1S1P47710 185 aa7.16□□□□□ -1.26
SHKBP1-210ENST00000595874 ZNF138P52744 262 aa7.16□□□□□ -1.26
SHKBP1-210ENST00000595874 PDE6HQ13956 83 aa7.16□□□□□ -1.26
SHKBP1-210ENST00000595874 ESRGQ1W209 222 aa7.16□□□□□ -1.26
SHKBP1-210ENST00000595874 Q5BKY6 102 aa7.16□□□□□ -1.26
SHKBP1-210ENST00000595874 KCNIP2Q9NS61 270 aa7.16□□□□□ -1.26
SHKBP1-210ENST00000595874 PKD1P98161 4303 aa7.16□□□□□ -1.26
SHKBP1-210ENST00000595874 SFTA3P0C7M3 94 aa7.15□□□□□ -1.26
SHKBP1-210ENST00000595874 TMEM183BQ1AE95 376 aa7.15□□□□□ -1.26
SHKBP1-210ENST00000595874 KHDC3LQ587J8 217 aa7.15□□□□□ -1.26
SHKBP1-210ENST00000595874 C9orf47Q6ZRZ4 202 aa7.15□□□□□ -1.26
SHKBP1-210ENST00000595874 GOLT1AQ6ZVE7 132 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms