RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 F6UB75 175 aa12.8□□□□□ -0.36
HOMER3-208ENST00000595756 NDUFB4O95168 129 aa12.8□□□□□ -0.36
HOMER3-208ENST00000595756 FXYD7P58549 80 aa12.8□□□□□ -0.36
HOMER3-208ENST00000595756 FAM74A1Q5RGS3 127 aa12.8□□□□□ -0.36
HOMER3-208ENST00000595756 OR10J6PQ8NGY7 276 aa12.8□□□□□ -0.36
HOMER3-208ENST00000595756 ZNF503Q96F45 646 aa12.8□□□□□ -0.36
HOMER3-208ENST00000595756 SLC35B3Q9H1N7 401 aa12.8□□□□□ -0.36
HOMER3-208ENST00000595756 GOLT1BQ9Y3E0 138 aa12.8□□□□□ -0.36
HOMER3-208ENST00000595756 IGHV3OR16-12A0A075B7B8 117 aa12.79□□□□□ -0.36
HOMER3-208ENST00000595756 P0DMU3 169 aa12.79□□□□□ -0.36
HOMER3-208ENST00000595756 FAM231AP0DMU4 169 aa12.79□□□□□ -0.36
HOMER3-208ENST00000595756 FAM231CP0DMU5 169 aa12.79□□□□□ -0.36
HOMER3-208ENST00000595756 CNN1P51911 297 aaKnown RBP12.79□□□□□ -0.36
HOMER3-208ENST00000595756 DPPA3Q6W0C5 159 aa12.79□□□□□ -0.36
HOMER3-208ENST00000595756 SLC51BQ86UW2 128 aa12.79□□□□□ -0.36
HOMER3-208ENST00000595756 TMEM167BQ9NRX6 74 aa12.79□□□□□ -0.36
HOMER3-208ENST00000595756 PPP1R14DQ9NXH3 145 aa12.79□□□□□ -0.36
HOMER3-208ENST00000595756 ARL14EPLP0DKL9 152 aa12.78□□□□□ -0.36
HOMER3-208ENST00000595756 CSN1S1P47710 185 aa12.78□□□□□ -0.36
HOMER3-208ENST00000595756 RANP62826 216 aaKnown RBP12.78□□□□□ -0.36
HOMER3-208ENST00000595756 HIST1H1AQ02539 215 aaPredicted RBP12.78□□□□□ -0.36
HOMER3-208ENST00000595756 ICAM4Q14773 271 aa12.78□□□□□ -0.36
HOMER3-208ENST00000595756 RXFP4Q8TDU9 374 aa12.78□□□□□ -0.36
HOMER3-208ENST00000595756 DKK2Q9UBU2 259 aa12.78□□□□□ -0.36
HOMER3-208ENST00000595756 PKD1P98161 4303 aa12.77□□□□□ -0.36
HOMER3-208ENST00000595756 HBE1P02100 147 aa12.77□□□□□ -0.37
HOMER3-208ENST00000595756 EMP1P54849 157 aa12.77□□□□□ -0.37
HOMER3-208ENST00000595756 CD300CQ08708 224 aa12.77□□□□□ -0.37
HOMER3-208ENST00000595756 ARL6IP6Q8N6S5 226 aa12.77□□□□□ -0.37
HOMER3-208ENST00000595756 POM121L12Q8N7R1 296 aa12.77□□□□□ -0.37
HOMER3-208ENST00000595756 FAM210BQ96KR6 192 aa12.77□□□□□ -0.37
HOMER3-208ENST00000595756 DYNC1H1Q14204 4646 aaKnown RBP12.76□□□□□ -0.37
HOMER3-208ENST00000595756 HMGB3O15347 200 aaKnown RBP12.76□□□□□ -0.37
HOMER3-208ENST00000595756 GCHFRP30047 84 aa12.76□□□□□ -0.37
HOMER3-208ENST00000595756 RAB5CP51148 216 aa12.76□□□□□ -0.37
HOMER3-208ENST00000595756 FAM222AQ5U5X8 452 aa12.76□□□□□ -0.37
HOMER3-208ENST00000595756 AMTNQ6UX39 209 aa12.76□□□□□ -0.37
HOMER3-208ENST00000595756 LINC00336Q6ZUF6 198 aa12.76□□□□□ -0.37
HOMER3-208ENST00000595756 C1orf158Q8N1D5 194 aa12.76□□□□□ -0.37
HOMER3-208ENST00000595756 EXOC3-AS1Q8N2X6 119 aa12.76□□□□□ -0.37
HOMER3-208ENST00000595756 C9orf62Q8N4C0 152 aa12.76□□□□□ -0.37
HOMER3-208ENST00000595756 SUN5Q8TC36 379 aa12.76□□□□□ -0.37
HOMER3-208ENST00000595756 PHYHIPLQ96FC7 376 aa12.76□□□□□ -0.37
HOMER3-208ENST00000595756 NIPSNAP3BQ9BS92 247 aa12.76□□□□□ -0.37
HOMER3-208ENST00000595756 Q9H3A6 140 aa12.76□□□□□ -0.37
HOMER3-208ENST00000595756 OTORQ9NRC9 128 aa12.76□□□□□ -0.37
HOMER3-208ENST00000595756 KIAA1109Q2LD37 5005 aa12.76□□□□□ -0.37
HOMER3-208ENST00000595756 DNAH11Q96DT5 4516 aa12.76□□□□□ -0.37
HOMER3-208ENST00000595756 LOC102723971A0A1B0GUV8 181 aa12.75□□□□□ -0.37
HOMER3-208ENST00000595756 CMTM2Q8TAZ6 248 aa12.75□□□□□ -0.37
HOMER3-208ENST00000595756 IGF2BP2-AS1Q96M15 143 aa12.75□□□□□ -0.37
HOMER3-208ENST00000595756 M0R3E3 92 aa12.74□□□□□ -0.37
HOMER3-208ENST00000595756 EIF3GO75821 320 aaKnown RBP eCLIP12.74□□□□□ -0.37
HOMER3-208ENST00000595756 TSPOP30536 169 aa12.74□□□□□ -0.37
HOMER3-208ENST00000595756 ZNF726P1Q15940 193 aa12.74□□□□□ -0.37
HOMER3-208ENST00000595756 RRN3P1Q2M238 152 aa12.74□□□□□ -0.37
HOMER3-208ENST00000595756 TMED6Q8WW62 240 aa12.74□□□□□ -0.37
HOMER3-208ENST00000595756 LINC00477Q96M19 166 aa12.74□□□□□ -0.37
HOMER3-208ENST00000595756 ODF3Q96PU9 254 aa12.74□□□□□ -0.37
HOMER3-208ENST00000595756 MAP1LC3B2A6NCE7 125 aa12.73□□□□□ -0.37
HOMER3-208ENST00000595756 PGPA6NDG6 321 aa12.73□□□□□ -0.37
HOMER3-208ENST00000595756 PRAC2D3DTV9 90 aa12.73□□□□□ -0.37
HOMER3-208ENST00000595756 NPIPB6E9PJ23 425 aa12.73□□□□□ -0.37
HOMER3-208ENST00000595756 BOLA2-SMG1P6H3BVE0 249 aa12.73□□□□□ -0.37
HOMER3-208ENST00000595756 SLC25A5P05141 298 aaKnown RBP12.73□□□□□ -0.37
HOMER3-208ENST00000595756 IQCF2Q8IXL9 164 aa12.73□□□□□ -0.37
HOMER3-208ENST00000595756 NKX6-2Q9C056 277 aaPredicted RBP12.73□□□□□ -0.37
HOMER3-208ENST00000595756 MAP1LC3BQ9GZQ8 125 aa12.73□□□□□ -0.37
HOMER3-208ENST00000595756 YTHDF2Q9Y5A9 579 aaKnown RBP12.73□□□□□ -0.37
HOMER3-208ENST00000595756 A0A1W2PRE2 83 aa12.72□□□□□ -0.37
HOMER3-208ENST00000595756 RBAKDNA6NC62 111 aa12.72□□□□□ -0.37
HOMER3-208ENST00000595756 INSP01308 110 aa12.72□□□□□ -0.37
HOMER3-208ENST00000595756 C9orf47Q6ZRZ4 202 aa12.72□□□□□ -0.37
HOMER3-208ENST00000595756 SSX7Q7RTT5 188 aa12.72□□□□□ -0.37
HOMER3-208ENST00000595756 FAM213BQ8TBF2 198 aa12.72□□□□□ -0.37
HOMER3-208ENST00000595756 MBD3L1Q8WWY6 194 aa12.72□□□□□ -0.37
HOMER3-208ENST00000595756 TMEM208Q9BTX3 173 aa12.72□□□□□ -0.37
HOMER3-208ENST00000595756 LEPP41159 167 aa12.71□□□□□ -0.37
HOMER3-208ENST00000595756 CDKN1BP46527 198 aa12.71□□□□□ -0.37
HOMER3-208ENST00000595756 TMEM78Q5T7P6 136 aa12.71□□□□□ -0.37
HOMER3-208ENST00000595756 SERTM2A0A1B0GWG4 89 aa12.7□□□□□ -0.38
HOMER3-208ENST00000595756 DIRC3C9JPN6 131 aa12.7□□□□□ -0.38
HOMER3-208ENST00000595756 TEX46H3BTG2 121 aa12.7□□□□□ -0.38
HOMER3-208ENST00000595756 CRXO43186 299 aaPredicted RBP12.7□□□□□ -0.38
HOMER3-208ENST00000595756 H2AFB1P0C5Y9 115 aa12.7□□□□□ -0.38
HOMER3-208ENST00000595756 SPINK13Q1W4C9 94 aa12.7□□□□□ -0.38
HOMER3-208ENST00000595756 SFT2D1Q8WV19 159 aa12.7□□□□□ -0.38
HOMER3-208ENST00000595756 C20orf144Q9BQM9 153 aa12.7□□□□□ -0.38
HOMER3-208ENST00000595756 TRBV7-9A0A0J9YWB2 115 aa12.69□□□□□ -0.38
HOMER3-208ENST00000595756 K7EQM0 130 aa12.69□□□□□ -0.38
HOMER3-208ENST00000595756 M0R2Z0 102 aa12.69□□□□□ -0.38
HOMER3-208ENST00000595756 NMBP08949 121 aa12.69□□□□□ -0.38
HOMER3-208ENST00000595756 FHITP49789 147 aa12.69□□□□□ -0.38
HOMER3-208ENST00000595756 SULT1A2P50226 295 aa12.69□□□□□ -0.38
HOMER3-208ENST00000595756 PPT1P50897 306 aa12.69□□□□□ -0.38
HOMER3-208ENST00000595756 DAD1P61803 113 aa12.69□□□□□ -0.38
HOMER3-208ENST00000595756 LGALS9BQ3B8N2 356 aa12.69□□□□□ -0.38
HOMER3-208ENST00000595756 C5orf17Q8NAS9 161 aa12.69□□□□□ -0.38
HOMER3-208ENST00000595756 AGPAT4-IT1Q9H0P7 198 aa12.69□□□□□ -0.38
HOMER3-208ENST00000595756 PLA2G2EQ9NZK7 142 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms