RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 IL36BQ9NZH7 164 aa9.61□□□□□ -0.87
SCAF1-202ENST00000595242 PGPA6NDG6 321 aa9.6□□□□□ -0.87
SCAF1-202ENST00000595242 C5orf52A6NGY3 159 aa9.6□□□□□ -0.87
SCAF1-202ENST00000595242 OR2T8A6NH00 312 aa9.6□□□□□ -0.87
SCAF1-202ENST00000595242 ZNF253O75346 499 aa9.6□□□□□ -0.87
SCAF1-202ENST00000595242 TCRAP04437 139 aa9.6□□□□□ -0.87
SCAF1-202ENST00000595242 FAM3BP58499 235 aaPredicted RBP9.6□□□□□ -0.87
SCAF1-202ENST00000595242 RANP62826 216 aaKnown RBP9.6□□□□□ -0.87
SCAF1-202ENST00000595242 SIGLEC15Q6ZMC9 328 aa9.6□□□□□ -0.87
SCAF1-202ENST00000595242 LINC00322Q6ZN03 302 aaPredicted RBP9.6□□□□□ -0.87
SCAF1-202ENST00000595242 ZFP82Q8N141 532 aa9.6□□□□□ -0.87
SCAF1-202ENST00000595242 BLNKQ8WV28 456 aa9.6□□□□□ -0.87
SCAF1-202ENST00000595242 FMC1Q96HJ9 113 aa9.6□□□□□ -0.87
SCAF1-202ENST00000595242 V9GYV3 84 aa9.6□□□□□ -0.87
SCAF1-202ENST00000595242 DNAH6Q9C0G6 4158 aa9.59□□□□□ -0.87
SCAF1-202ENST00000595242 NUPR2A6NF83 97 aa9.59□□□□□ -0.87
SCAF1-202ENST00000595242 BMPR1BO00238 502 aa9.59□□□□□ -0.87
SCAF1-202ENST00000595242 UBE2CO00762 179 aa9.59□□□□□ -0.87
SCAF1-202ENST00000595242 IGHV3-23P01764 117 aa9.59□□□□□ -0.87
SCAF1-202ENST00000595242 LGALS1P09382 135 aaKnown RBP9.59□□□□□ -0.87
SCAF1-202ENST00000595242 GPR183P32249 361 aa9.59□□□□□ -0.87
SCAF1-202ENST00000595242 GNG5P63218 68 aa9.59□□□□□ -0.87
SCAF1-202ENST00000595242 MLST8Q9BVC4 326 aa9.59□□□□□ -0.87
SCAF1-202ENST00000595242 RABAC1Q9UI14 185 aa9.59□□□□□ -0.87
SCAF1-202ENST00000595242 A0A1W2PPQ1 181 aa9.58□□□□□ -0.88
SCAF1-202ENST00000595242 PPP5D1E7EU14 171 aa9.58□□□□□ -0.88
SCAF1-202ENST00000595242 MED14OSP0DP75 135 aa9.58□□□□□ -0.88
SCAF1-202ENST00000595242 RPL7P18124 248 aaKnown RBP9.58□□□□□ -0.88
SCAF1-202ENST00000595242 UBE2G1P62253 170 aa9.58□□□□□ -0.88
SCAF1-202ENST00000595242 ATP5G2Q06055 141 aa9.58□□□□□ -0.88
SCAF1-202ENST00000595242 TOMM20LQ6UXN7 152 aa9.58□□□□□ -0.88
SCAF1-202ENST00000595242 USMG5Q96IX5 58 aa9.58□□□□□ -0.88
SCAF1-202ENST00000595242 A0A087X0K7 114 aa9.57□□□□□ -0.88
SCAF1-202ENST00000595242 SERTM2A0A1B0GWG4 89 aa9.57□□□□□ -0.88
SCAF1-202ENST00000595242 LTAP01374 205 aa9.57□□□□□ -0.88
SCAF1-202ENST00000595242 TRGC2P03986 189 aa9.57□□□□□ -0.88
SCAF1-202ENST00000595242 CLEC3BP05452 202 aa9.57□□□□□ -0.88
SCAF1-202ENST00000595242 S100A6P06703 90 aa9.57□□□□□ -0.88
SCAF1-202ENST00000595242 ERVFC1-1P60608 527 aa9.57□□□□□ -0.88
SCAF1-202ENST00000595242 RELQ04864 619 aaPredicted RBP9.57□□□□□ -0.88
SCAF1-202ENST00000595242 OR5I1Q13606 314 aa9.57□□□□□ -0.88
SCAF1-202ENST00000595242 ACTL10Q5JWF8 245 aa9.57□□□□□ -0.88
SCAF1-202ENST00000595242 BAGE2Q86Y30 109 aa9.57□□□□□ -0.88
SCAF1-202ENST00000595242 TMEM75Q8N9X5 138 aa9.57□□□□□ -0.88
SCAF1-202ENST00000595242 LINC00479Q96M42 142 aa9.57□□□□□ -0.88
SCAF1-202ENST00000595242 GPR82Q96P67 336 aa9.57□□□□□ -0.88
SCAF1-202ENST00000595242 ZNF492Q9P255 531 aa9.57□□□□□ -0.88
SCAF1-202ENST00000595242 U3KQE9 123 aa9.57□□□□□ -0.88
SCAF1-202ENST00000595242 HIST1H2BKO60814 126 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 IGHV3-11P01762 117 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 HIST1H2BJP06899 126 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 HIST1H2BOP23527 126 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 HIST1H2BBP33778 126 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 HIST1H2BDP58876 126 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 HIST1H2BCP62807 126 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 PSG9Q00887 426 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 HIST2H2BEQ16778 126 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 RPEL1Q2QD12 228 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.56□□□□□ -0.88
SCAF1-202ENST00000595242 IBA57Q5T440 356 aaKnown RBP9.56□□□□□ -0.88
SCAF1-202ENST00000595242 C1orf194Q5T5A4 169 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 CEMP1Q6PRD7 247 aaPredicted RBP9.56□□□□□ -0.88
SCAF1-202ENST00000595242 CLEC19AQ6UXS0 136 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 Q86TA4 180 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 HIST1H2BHQ93079 126 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 HIST1H2BNQ99877 126 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 HIST1H2BMQ99879 126 aa9.56□□□□□ -0.88
SCAF1-202ENST00000595242 SAV1Q9H4B6 383 aaPredicted RBP9.56□□□□□ -0.88
SCAF1-202ENST00000595242 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.55□□□□□ -0.88
SCAF1-202ENST00000595242 TRAV34A0A0B4J273 112 aa9.55□□□□□ -0.88
SCAF1-202ENST00000595242 SMIM27A0A1W2PRY6 76 aa9.55□□□□□ -0.88
SCAF1-202ENST00000595242 ZNF320A2RRD8 509 aa9.55□□□□□ -0.88
SCAF1-202ENST00000595242 H3BTX0 84 aa9.55□□□□□ -0.88
SCAF1-202ENST00000595242 SLC17A3O00476 420 aa9.55□□□□□ -0.88
SCAF1-202ENST00000595242 IGLV2-11P01706 119 aa9.55□□□□□ -0.88
SCAF1-202ENST00000595242 TRGV3P03979 118 aa9.55□□□□□ -0.88
SCAF1-202ENST00000595242 SNRPEP62304 92 aaKnown RBP9.55□□□□□ -0.88
SCAF1-202ENST00000595242 FAM209BQ5JX69 171 aa9.55□□□□□ -0.88
SCAF1-202ENST00000595242 LGALS9CQ6DKI2 356 aa9.55□□□□□ -0.88
SCAF1-202ENST00000595242 CMTM2Q8TAZ6 248 aa9.55□□□□□ -0.88
SCAF1-202ENST00000595242 FRZBQ92765 325 aa9.55□□□□□ -0.88
SCAF1-202ENST00000595242 C17orf77Q96MU5 243 aa9.55□□□□□ -0.88
SCAF1-202ENST00000595242 MS4A10Q96PG2 267 aa9.55□□□□□ -0.88
SCAF1-202ENST00000595242 KRTAP4-5Q9BYR2 181 aa9.55□□□□□ -0.88
SCAF1-202ENST00000595242 C19orf71A6NCJ1 209 aa9.54□□□□□ -0.88
SCAF1-202ENST00000595242 FBLL1A6NHQ2 334 aaKnown RBP9.54□□□□□ -0.88
SCAF1-202ENST00000595242 BUB3O43684 328 aa9.54□□□□□ -0.88
SCAF1-202ENST00000595242 SNRPCP09234 159 aaKnown RBP9.54□□□□□ -0.88
SCAF1-202ENST00000595242 TRGC1P0CF51 173 aa9.54□□□□□ -0.88
SCAF1-202ENST00000595242 MGST1P10620 155 aaKnown RBP9.54□□□□□ -0.88
SCAF1-202ENST00000595242 TPPP2P59282 170 aa9.54□□□□□ -0.88
SCAF1-202ENST00000595242 COX19Q49B96 90 aa9.54□□□□□ -0.88
SCAF1-202ENST00000595242 CT83Q5H943 113 aa9.54□□□□□ -0.88
SCAF1-202ENST00000595242 LCN12Q6JVE5 192 aa9.54□□□□□ -0.88
SCAF1-202ENST00000595242 TMEM183AQ8IXX5 376 aa9.54□□□□□ -0.88
SCAF1-202ENST00000595242 EXOC3-AS1Q8N2X6 119 aa9.54□□□□□ -0.88
SCAF1-202ENST00000595242 RNASE7Q9H1E1 156 aaKnown RBP9.54□□□□□ -0.88
SCAF1-202ENST00000595242 AAMDCQ9H7C9 122 aa9.54□□□□□ -0.88
SCAF1-202ENST00000595242 KLK5Q9Y337 293 aaPredicted RBP9.54□□□□□ -0.88
SCAF1-202ENST00000595242 FAT2Q9NYQ8 4349 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms