RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 KCNIP4Q6PIL6 250 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 FP248Q71RG6 208 aaPredicted RBP1.64□□□□□ -2.15
VRK3-204ENST00000593912 ZNF546Q86UE3 836 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 NUDCD2Q8WVJ2 157 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 ODF3Q96PU9 254 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 GFI1Q99684 422 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 CHCHD7Q9BUK0 85 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 LINC00474Q9P2X8 69 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 DAPK2Q9UIK4 370 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 SSR3Q9UNL2 185 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 SNRPGP15A8MWD9 76 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 H3BRN7 92 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 GPR31O00270 319 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 EDF1O60869 148 aaKnown RBP1.63□□□□□ -2.15
VRK3-204ENST00000593912 ZNF253O75346 499 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 TNFAIP8O95379 198 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 IGKV1-5P01602 117 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 GPX1P07203 203 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 GABRB1P18505 474 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 DTYMKP23919 212 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 PTTG1IPP53801 180 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 UBE2MP61081 183 aaKnown RBP1.63□□□□□ -2.15
VRK3-204ENST00000593912 FOXI1Q12951 378 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 GAGE2BQ13066 116 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 BAK1Q16611 211 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 GUK1Q16774 197 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 SP6Q3SY56 376 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 CFAP126Q5VTH2 177 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 Q6Q795 121 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 DHRS11Q6UWP2 260 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 TMEM182Q6ZP80 229 aaPredicted RBP1.63□□□□□ -2.15
VRK3-204ENST00000593912 LINC00269Q8N2A0 174 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 ZFAND2AQ8N6M9 145 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 OR52I1Q8NGK6 324 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 OR4D5Q8NGN0 318 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 OR10R2Q8NGX6 335 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 LHFPL5Q8TAF8 219 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 RNASEH2CQ8TDP1 164 aaKnown RBP1.63□□□□□ -2.15
VRK3-204ENST00000593912 LINC00526Q96FQ7 95 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 GPR82Q96P67 336 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 SPXQ9BT56 116 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 PLGRKTQ9HBL7 147 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 ENY2Q9NPA8 101 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 ZNF331Q9NQX6 463 aaPredicted RBP1.63□□□□□ -2.15
VRK3-204ENST00000593912 ANXA10Q9UJ72 324 aa1.63□□□□□ -2.15
VRK3-204ENST00000593912 AHNAK2Q8IVF2 5795 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 A0A087X0K7 114 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 A0A0G2JRQ6 117 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 A0A1B0GVG6 124 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 PMS2P5A8MQ11 134 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 ANKRD65E5RJM6 399 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 M0R2P5 195 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 GNRH2O43555 120 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 SSX5O60225 188 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 WBP4O75554 376 aaKnown RBP1.62□□□□□ -2.15
VRK3-204ENST00000593912 INPP1P49441 399 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 MS4A2Q01362 244 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 C2orf76Q3KRA6 126 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 PHLDA2Q53GA4 152 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 C2orf83Q53S99 150 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 LGI3Q8N145 548 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 C14orf178Q8N769 122 aaPredicted RBP1.62□□□□□ -2.15
VRK3-204ENST00000593912 OR2T35Q8NGX2 323 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 CANT1Q8WVQ1 401 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 DNAJC9Q8WXX5 260 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 FAM19A4Q96LR4 140 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 KIR2DL4Q99706 377 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 CIB1Q99828 191 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 PDCD10Q9BUL8 212 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 SH3BGRL3Q9H299 93 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 HEYLQ9NQ87 328 aaPredicted RBP1.62□□□□□ -2.15
VRK3-204ENST00000593912 C8orf4Q9NR00 106 aa1.62□□□□□ -2.15
VRK3-204ENST00000593912 MEIS3P1A6NDR6 274 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 M0R3E3 92 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 MRPS12O15235 138 aaKnown RBP1.61□□□□□ -2.15
VRK3-204ENST00000593912 PGAM2P15259 253 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 RPL7P18124 248 aaKnown RBP1.61□□□□□ -2.15
VRK3-204ENST00000593912 SPRR2DP22532 72 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 GADD45AP24522 165 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 TAS2R20P59543 309 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 ARPC4P59998 168 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 ZNF674Q2M3X9 581 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 TRIM16LQ309B1 348 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 CDNFQ49AH0 187 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 ETFRF1Q6IPR1 90 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 EIF5AL1Q6IS14 154 aaKnown RBP1.61□□□□□ -2.15
VRK3-204ENST00000593912 ACOT7LQ6ZUV0 252 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 FAM3DQ96BQ1 224 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 MRPL53Q96EL3 112 aaKnown RBP1.61□□□□□ -2.15
VRK3-204ENST00000593912 MYCBPQ99417 103 aaPredicted RBP1.61□□□□□ -2.15
VRK3-204ENST00000593912 SIKE1Q9BRV8 207 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 ZNF2Q9BSG1 426 aaPredicted RBP1.61□□□□□ -2.15
VRK3-204ENST00000593912 SHANK2-AS3Q9BTD1 123 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 TMEM147Q9BVK8 224 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 AGPAT4-IT1Q9H0P7 198 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 FXYD6Q9H0Q3 95 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 TMBIM4Q9HC24 238 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 WFDC1Q9HC57 220 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 NAGKQ9UJ70 344 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms