RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 ZNF253O75346 499 aa11.92□□□□□ -0.5
RETREG3-212ENST00000593251 NDUFB4O95168 129 aa11.92□□□□□ -0.5
RETREG3-212ENST00000593251 CAV2P51636 162 aa11.92□□□□□ -0.5
RETREG3-212ENST00000593251 TCL1AP56279 114 aa11.92□□□□□ -0.5
RETREG3-212ENST00000593251 ZNF846Q147U1 533 aa11.92□□□□□ -0.5
RETREG3-212ENST00000593251 CNPY1Q3B7I2 92 aa11.92□□□□□ -0.5
RETREG3-212ENST00000593251 ANXA2RQ3ZCQ2 193 aa11.92□□□□□ -0.5
RETREG3-212ENST00000593251 Q6ZQT7 251 aa11.92□□□□□ -0.5
RETREG3-212ENST00000593251 FAM19A4Q96LR4 140 aa11.92□□□□□ -0.5
RETREG3-212ENST00000593251 PFDN5Q99471 154 aa11.92□□□□□ -0.5
RETREG3-212ENST00000593251 SDHCQ99643 169 aaPredicted RBP11.92□□□□□ -0.5
RETREG3-212ENST00000593251 UQCC1Q9NVA1 299 aa11.92□□□□□ -0.5
RETREG3-212ENST00000593251 MRPL16Q9NX20 251 aaKnown RBP11.92□□□□□ -0.5
RETREG3-212ENST00000593251 WDR83OSQ9Y284 106 aa11.92□□□□□ -0.5
RETREG3-212ENST00000593251 UBE2L5PA0A1B0GUS4 154 aa11.91□□□□□ -0.5
RETREG3-212ENST00000593251 FAM25EA8MYX2 175 aa11.91□□□□□ -0.5
RETREG3-212ENST00000593251 MPDU1O75352 247 aa11.91□□□□□ -0.5
RETREG3-212ENST00000593251 PYYP10082 97 aa11.91□□□□□ -0.5
RETREG3-212ENST00000593251 PRR9Q5T870 116 aa11.91□□□□□ -0.5
RETREG3-212ENST00000593251 EXOC3-AS1Q8N2X6 119 aa11.91□□□□□ -0.5
RETREG3-212ENST00000593251 BLNKQ8WV28 456 aa11.91□□□□□ -0.5
RETREG3-212ENST00000593251 MRPL53Q96EL3 112 aaKnown RBP11.91□□□□□ -0.5
RETREG3-212ENST00000593251 LINC00467Q9BRT7 94 aa11.91□□□□□ -0.5
RETREG3-212ENST00000593251 SLC39A9Q9NUM3 307 aa11.91□□□□□ -0.5
RETREG3-212ENST00000593251 PTTG2Q9NZH5 202 aa11.91□□□□□ -0.5
RETREG3-212ENST00000593251 TIMM9Q9Y5J7 89 aa11.91□□□□□ -0.5
RETREG3-212ENST00000593251 GPX1P07203 203 aa11.9□□□□□ -0.5
RETREG3-212ENST00000593251 BAXQ07812 192 aa11.9□□□□□ -0.5
RETREG3-212ENST00000593251 Q5VSD8 79 aa11.9□□□□□ -0.5
RETREG3-212ENST00000593251 C12orf45Q8N5I9 185 aaPredicted RBP11.9□□□□□ -0.5
RETREG3-212ENST00000593251 ST6GAL2Q96JF0 529 aa11.9□□□□□ -0.5
RETREG3-212ENST00000593251 LINC00477Q96M19 166 aa11.9□□□□□ -0.5
RETREG3-212ENST00000593251 C8orf49Q96NF6 230 aa11.9□□□□□ -0.5
RETREG3-212ENST00000593251 C11orf1Q9H5F2 150 aa11.9□□□□□ -0.5
RETREG3-212ENST00000593251 IGKV2-40A0A087WW87 121 aaPredicted RBP11.89□□□□□ -0.51
RETREG3-212ENST00000593251 RGS13O14921 159 aa11.89□□□□□ -0.51
RETREG3-212ENST00000593251 IGKV2D-40P01614 121 aaPredicted RBP11.89□□□□□ -0.51
RETREG3-212ENST00000593251 RPL29P47914 159 aaKnown RBP11.89□□□□□ -0.51
RETREG3-212ENST00000593251 KRTAP10-1P60331 282 aa11.89□□□□□ -0.51
RETREG3-212ENST00000593251 LYPD5Q6UWN5 251 aa11.89□□□□□ -0.51
RETREG3-212ENST00000593251 C20orf85Q9H1P6 137 aa11.89□□□□□ -0.51
RETREG3-212ENST00000593251 PRO0255Q9UI72 69 aa11.89□□□□□ -0.51
RETREG3-212ENST00000593251 DMBT1Q9UGM3 2413 aaPredicted RBP11.88□□□□□ -0.51
RETREG3-212ENST00000593251 PRAF2O60831 178 aa11.88□□□□□ -0.51
RETREG3-212ENST00000593251 HIST1H1EP10412 219 aaKnown RBP11.88□□□□□ -0.51
RETREG3-212ENST00000593251 CRISP2P16562 243 aa11.88□□□□□ -0.51
RETREG3-212ENST00000593251 CRYBA4P53673 196 aa11.88□□□□□ -0.51
RETREG3-212ENST00000593251 VWC2Q2TAL6 325 aa11.88□□□□□ -0.51
RETREG3-212ENST00000593251 CDPF1Q6NVV7 123 aa11.88□□□□□ -0.51
RETREG3-212ENST00000593251 FAM122CQ6P4D5 195 aa11.88□□□□□ -0.51
RETREG3-212ENST00000593251 VGLL1Q99990 258 aa11.88□□□□□ -0.51
RETREG3-212ENST00000593251 TMEM14CQ9P0S9 112 aa11.88□□□□□ -0.51
RETREG3-212ENST00000593251 HHLA3Q9XRX5 114 aa11.88□□□□□ -0.51
RETREG3-212ENST00000593251 PRELID1Q9Y255 219 aa11.88□□□□□ -0.51
RETREG3-212ENST00000593251 VPS13BQ7Z7G8 4022 aa11.88□□□□□ -0.51
RETREG3-212ENST00000593251 IGHV1OR15-1A0A075B7D0 117 aa11.87□□□□□ -0.51
RETREG3-212ENST00000593251 A0A087WTM6 91 aa11.87□□□□□ -0.51
RETREG3-212ENST00000593251 IGSF23A1L1A6 192 aa11.87□□□□□ -0.51
RETREG3-212ENST00000593251 C5orf51A6NDU8 294 aa11.87□□□□□ -0.51
RETREG3-212ENST00000593251 FGF7P21781 194 aa11.87□□□□□ -0.51
RETREG3-212ENST00000593251 FHL2Q14192 279 aa11.87□□□□□ -0.51
RETREG3-212ENST00000593251 ICAM4Q14773 271 aa11.87□□□□□ -0.51
RETREG3-212ENST00000593251 GCSAMLQ5JQS6 135 aa11.87□□□□□ -0.51
RETREG3-212ENST00000593251 IBA57Q5T440 356 aaKnown RBP11.87□□□□□ -0.51
RETREG3-212ENST00000593251 C9orf47Q6ZRZ4 202 aa11.87□□□□□ -0.51
RETREG3-212ENST00000593251 ZFAND2AQ8N6M9 145 aa11.87□□□□□ -0.51
RETREG3-212ENST00000593251 SEC22CQ9BRL7 303 aa11.87□□□□□ -0.51
RETREG3-212ENST00000593251 RBM38Q9H0Z9 239 aaKnown RBP11.87□□□□□ -0.51
RETREG3-212ENST00000593251 IFNA5P01569 189 aa11.86□□□□□ -0.51
RETREG3-212ENST00000593251 IL7P13232 177 aa11.86□□□□□ -0.51
RETREG3-212ENST00000593251 PVALBP20472 110 aaPredicted RBP11.86□□□□□ -0.51
RETREG3-212ENST00000593251 SULT1A1P50225 295 aa11.86□□□□□ -0.51
RETREG3-212ENST00000593251 S100A10P60903 97 aa11.86□□□□□ -0.51
RETREG3-212ENST00000593251 PDE6HQ13956 83 aa11.86□□□□□ -0.51
RETREG3-212ENST00000593251 MRPL23Q16540 153 aaKnown RBP11.86□□□□□ -0.51
RETREG3-212ENST00000593251 TMEM78Q5T7P6 136 aa11.86□□□□□ -0.51
RETREG3-212ENST00000593251 NFE4Q86UQ8 179 aa11.86□□□□□ -0.51
RETREG3-212ENST00000593251 WFDC10BQ8IUB3 73 aa11.86□□□□□ -0.51
RETREG3-212ENST00000593251 FRZBQ92765 325 aa11.86□□□□□ -0.51
RETREG3-212ENST00000593251 ARPC5LQ9BPX5 153 aa11.86□□□□□ -0.51
RETREG3-212ENST00000593251 AAMDCQ9H7C9 122 aa11.86□□□□□ -0.51
RETREG3-212ENST00000593251 TRAV6A0A075B6T7 132 aa11.85□□□□□ -0.51
RETREG3-212ENST00000593251 E5RGE8 158 aa11.85□□□□□ -0.51
RETREG3-212ENST00000593251 SMR3BP02814 79 aaPredicted RBP11.85□□□□□ -0.51
RETREG3-212ENST00000593251 S100A11P31949 105 aa11.85□□□□□ -0.51
RETREG3-212ENST00000593251 NEGR1Q7Z3B1 354 aa11.85□□□□□ -0.51
RETREG3-212ENST00000593251 SLC25A2Q9BXI2 301 aa11.85□□□□□ -0.51
RETREG3-212ENST00000593251 LYRM2Q9NU23 88 aaPredicted RBP11.85□□□□□ -0.51
RETREG3-212ENST00000593251 ZNF492Q9P255 531 aa11.85□□□□□ -0.51
RETREG3-212ENST00000593251 LY96Q9Y6Y9 160 aa11.85□□□□□ -0.51
RETREG3-212ENST00000593251 MYCBP2O75592 4640 aa11.85□□□□□ -0.51
RETREG3-212ENST00000593251 PLA2G10O15496 165 aa11.84□□□□□ -0.51
RETREG3-212ENST00000593251 SFTA3P0C7M3 94 aa11.84□□□□□ -0.51
RETREG3-212ENST00000593251 HAMPP81172 84 aa11.84□□□□□ -0.51
RETREG3-212ENST00000593251 SLAQ13239 276 aa11.84□□□□□ -0.51
RETREG3-212ENST00000593251 MUC21Q5SSG8 566 aa11.84□□□□□ -0.51
RETREG3-212ENST00000593251 TMEM252Q8N6L7 170 aa11.84□□□□□ -0.51
RETREG3-212ENST00000593251 Q8TAT8 98 aa11.84□□□□□ -0.51
RETREG3-212ENST00000593251 C2orf50Q96LR7 162 aa11.84□□□□□ -0.51
RETREG3-212ENST00000593251 TRAV9-2A0A087WT02 112 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms