RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 MLST8Q9BVC4 326 aa10.1□□□□□ -0.79
VMP1-217ENST00000593168 RPS10P5Q9NQ39 176 aa10.1□□□□□ -0.79
VMP1-217ENST00000593168 PSG8Q9UQ74 426 aa10.1□□□□□ -0.79
VMP1-217ENST00000593168 ZFP30Q9Y2G7 519 aa10.1□□□□□ -0.79
VMP1-217ENST00000593168 A0A087WWC5 75 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 TRAV8-1A0A0A6YYK1 113 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 PRAC2D3DTV9 90 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 GCGP01275 180 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 PF4P02776 101 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 PRNTQ86SH4 94 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 Q86TA4 180 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 WFDC3Q8IUB2 231 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 TMEM183AQ8IXX5 376 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 TMEM61Q8N0U2 210 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 LINC00482Q8N8I6 264 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 ISOC2Q96AB3 205 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 SGK494Q96LW2 274 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 CTDSP1Q9GZU7 261 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 TMEM242Q9NWH2 141 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 SELENOKQ9Y6D0 94 aa10.09□□□□□ -0.79
VMP1-217ENST00000593168 IGKV2-40A0A087WW87 121 aaPredicted RBP10.08□□□□□ -0.8
VMP1-217ENST00000593168 IGKV2D-40P01614 121 aaPredicted RBP10.08□□□□□ -0.8
VMP1-217ENST00000593168 MT-ND4LP03901 98 aa10.08□□□□□ -0.8
VMP1-217ENST00000593168 SNRPD3P62318 126 aaKnown RBP10.08□□□□□ -0.8
VMP1-217ENST00000593168 CD300EQ496F6 205 aaPredicted RBP10.08□□□□□ -0.8
VMP1-217ENST00000593168 SAPCD1Q5SSQ6 148 aa10.08□□□□□ -0.8
VMP1-217ENST00000593168 C9orf47Q6ZRZ4 202 aa10.08□□□□□ -0.8
VMP1-217ENST00000593168 ZNF738Q8NE65 137 aa10.08□□□□□ -0.8
VMP1-217ENST00000593168 SPAG8Q99932 426 aaPredicted RBP10.08□□□□□ -0.8
VMP1-217ENST00000593168 VGLL1Q99990 258 aa10.08□□□□□ -0.8
VMP1-217ENST00000593168 BIN3Q9NQY0 253 aa10.08□□□□□ -0.8
VMP1-217ENST00000593168 AURKAIP1Q9NWT8 199 aaPredicted RBP10.08□□□□□ -0.8
VMP1-217ENST00000593168 PPP1R14DQ9NXH3 145 aa10.08□□□□□ -0.8
VMP1-217ENST00000593168 K7EN84 100 aa10.07□□□□□ -0.8
VMP1-217ENST00000593168 SCO1O75880 301 aa10.07□□□□□ -0.8
VMP1-217ENST00000593168 TFPI2P48307 235 aa10.07□□□□□ -0.8
VMP1-217ENST00000593168 RNF212Q495C1 297 aa10.07□□□□□ -0.8
VMP1-217ENST00000593168 OR2K2Q8NGT1 345 aa10.07□□□□□ -0.8
VMP1-217ENST00000593168 ANAPC16Q96DE5 110 aa10.07□□□□□ -0.8
VMP1-217ENST00000593168 AGPAT4-IT1Q9H0P7 198 aa10.07□□□□□ -0.8
VMP1-217ENST00000593168 PPP1R2P9O14990 202 aa10.06□□□□□ -0.8
VMP1-217ENST00000593168 MGST1P10620 155 aaKnown RBP10.06□□□□□ -0.8
VMP1-217ENST00000593168 COX8CQ7Z4L0 72 aa10.06□□□□□ -0.8
VMP1-217ENST00000593168 FAM24BQ8N5W8 94 aa10.06□□□□□ -0.8
VMP1-217ENST00000593168 MRAPQ8TCY5 172 aa10.06□□□□□ -0.8
VMP1-217ENST00000593168 SFRP2Q96HF1 295 aa10.06□□□□□ -0.8
VMP1-217ENST00000593168 LINC00477Q96M19 166 aa10.06□□□□□ -0.8
VMP1-217ENST00000593168 PRR25Q96S07 402 aa10.06□□□□□ -0.8
VMP1-217ENST00000593168 TUBA4BQ9H853 241 aa10.06□□□□□ -0.8
VMP1-217ENST00000593168 OSTCQ9NRP0 149 aa10.06□□□□□ -0.8
VMP1-217ENST00000593168 SMCO4Q9NRQ5 59 aa10.06□□□□□ -0.8
VMP1-217ENST00000593168 CXorf65A6NEN9 183 aa10.05□□□□□ -0.8
VMP1-217ENST00000593168 OR4C46A6NHA9 309 aa10.05□□□□□ -0.8
VMP1-217ENST00000593168 NPIPB6E9PJ23 425 aa10.05□□□□□ -0.8
VMP1-217ENST00000593168 SAP30O75446 220 aa10.05□□□□□ -0.8
VMP1-217ENST00000593168 IGLV1-51P01701 117 aa10.05□□□□□ -0.8
VMP1-217ENST00000593168 ZNF138P52744 262 aa10.05□□□□□ -0.8
VMP1-217ENST00000593168 OR5I1Q13606 314 aa10.05□□□□□ -0.8
VMP1-217ENST00000593168 TMEM78Q5T7P6 136 aa10.05□□□□□ -0.8
VMP1-217ENST00000593168 FAM231DQ6ZW35 169 aa10.05□□□□□ -0.8
VMP1-217ENST00000593168 NHLRC2Q8NBF2 726 aa10.05□□□□□ -0.8
VMP1-217ENST00000593168 OR8A1Q8NGG7 326 aa10.05□□□□□ -0.8
VMP1-217ENST00000593168 OR10G8Q8NGN5 311 aa10.05□□□□□ -0.8
VMP1-217ENST00000593168 OR10J6PQ8NGY7 276 aa10.05□□□□□ -0.8
VMP1-217ENST00000593168 NDFIP1Q9BT67 221 aa10.05□□□□□ -0.8
VMP1-217ENST00000593168 ZNF492Q9P255 531 aa10.05□□□□□ -0.8
VMP1-217ENST00000593168 COL7A1Q02388 2944 aa10.04□□□□□ -0.8
VMP1-217ENST00000593168 H7BYZ3 331 aa10.04□□□□□ -0.8
VMP1-217ENST00000593168 ZNF688P0C7X2 276 aa10.04□□□□□ -0.8
VMP1-217ENST00000593168 PRB4P10163 310 aaPredicted RBP10.04□□□□□ -0.8
VMP1-217ENST00000593168 ERVFC1-1P60608 527 aa10.04□□□□□ -0.8
VMP1-217ENST00000593168 ERCC8Q13216 396 aa10.04□□□□□ -0.8
VMP1-217ENST00000593168 BTN1A1Q13410 526 aa10.04□□□□□ -0.8
VMP1-217ENST00000593168 PSMG4Q5JS54 123 aa10.04□□□□□ -0.8
VMP1-217ENST00000593168 C15orf54Q8N8G6 183 aa10.04□□□□□ -0.8
VMP1-217ENST00000593168 ZNF256Q9Y2P7 627 aaPredicted RBP10.04□□□□□ -0.8
VMP1-217ENST00000593168 LENEPQ9Y5L5 61 aa10.04□□□□□ -0.8
VMP1-217ENST00000593168 TRBV7-9A0A0J9YWB2 115 aa10.03□□□□□ -0.8
VMP1-217ENST00000593168 INSL3P51460 131 aa10.03□□□□□ -0.8
VMP1-217ENST00000593168 OXLD1Q5BKU9 147 aa10.03□□□□□ -0.8
VMP1-217ENST00000593168 IBA57Q5T440 356 aaKnown RBP10.03□□□□□ -0.8
VMP1-217ENST00000593168 WFDC9Q8NEX5 89 aa10.03□□□□□ -0.8
VMP1-217ENST00000593168 C19orf71A6NCJ1 209 aa10.02□□□□□ -0.81
VMP1-217ENST00000593168 IZUMO1RA6ND01 250 aa10.02□□□□□ -0.81
VMP1-217ENST00000593168 F6UB75 175 aa10.02□□□□□ -0.81
VMP1-217ENST00000593168 CT45A10P0DMU9 189 aa10.02□□□□□ -0.81
VMP1-217ENST00000593168 CMC4P56277 68 aaPredicted RBP10.02□□□□□ -0.81
VMP1-217ENST00000593168 HIST1H1AQ02539 215 aaPredicted RBP10.02□□□□□ -0.81
VMP1-217ENST00000593168 SMUG1Q53HV7 270 aa10.02□□□□□ -0.81
VMP1-217ENST00000593168 EBLN2Q6P2I7 272 aa10.02□□□□□ -0.81
VMP1-217ENST00000593168 TMEM88Q6PEY1 159 aa10.02□□□□□ -0.81
VMP1-217ENST00000593168 FOXI2Q6ZQN5 318 aa10.02□□□□□ -0.81
VMP1-217ENST00000593168 CBLN2Q8IUK8 224 aa10.02□□□□□ -0.81
VMP1-217ENST00000593168 NUDT10Q8NFP7 164 aa10.02□□□□□ -0.81
VMP1-217ENST00000593168 Q8TAT8 98 aa10.02□□□□□ -0.81
VMP1-217ENST00000593168 NUDT11Q96G61 164 aa10.02□□□□□ -0.81
VMP1-217ENST00000593168 ZC2HC1AQ96GY0 325 aa10.02□□□□□ -0.81
VMP1-217ENST00000593168 IMMP2LQ96T52 175 aa10.02□□□□□ -0.81
VMP1-217ENST00000593168 DNAH9Q9NYC9 4486 aa10.01□□□□□ -0.81
VMP1-217ENST00000593168 SORL1Q92673 2214 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms