RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 DNAH6Q9C0G6 4158 aa9.95□□□□□ -0.82
CLIP3-205ENST00000592017 TEX48A0A1B0GUV7 120 aa9.95□□□□□ -0.82
CLIP3-205ENST00000592017 CSN1S1P47710 185 aa9.95□□□□□ -0.82
CLIP3-205ENST00000592017 TMEM78Q5T7P6 136 aa9.95□□□□□ -0.82
CLIP3-205ENST00000592017 PQLC2Q6ZP29 291 aa9.95□□□□□ -0.82
CLIP3-205ENST00000592017 ODF3Q96PU9 254 aa9.95□□□□□ -0.82
CLIP3-205ENST00000592017 PLA2G2EQ9NZK7 142 aa9.95□□□□□ -0.82
CLIP3-205ENST00000592017 RPH3ALQ9UNE2 315 aa9.95□□□□□ -0.82
CLIP3-205ENST00000592017 DEFB131BA0A096LNP1 70 aa9.94□□□□□ -0.82
CLIP3-205ENST00000592017 TRAV12-3A0A0B4J271 114 aa9.94□□□□□ -0.82
CLIP3-205ENST00000592017 H7BYZ3 331 aa9.94□□□□□ -0.82
CLIP3-205ENST00000592017 MBP02144 154 aa9.94□□□□□ -0.82
CLIP3-205ENST00000592017 ARL14EPLP0DKL9 152 aa9.94□□□□□ -0.82
CLIP3-205ENST00000592017 HTN3P15516 51 aa9.94□□□□□ -0.82
CLIP3-205ENST00000592017 AZU1P20160 251 aa9.94□□□□□ -0.82
CLIP3-205ENST00000592017 TAS2R60P59551 318 aa9.94□□□□□ -0.82
CLIP3-205ENST00000592017 GNPNAT1Q96EK6 184 aaPredicted RBP9.94□□□□□ -0.82
CLIP3-205ENST00000592017 HYLS1Q96M11 299 aa9.94□□□□□ -0.82
CLIP3-205ENST00000592017 LINC00477Q96M19 166 aa9.94□□□□□ -0.82
CLIP3-205ENST00000592017 VGLL1Q99990 258 aa9.94□□□□□ -0.82
CLIP3-205ENST00000592017 NIPSNAP3BQ9BS92 247 aa9.94□□□□□ -0.82
CLIP3-205ENST00000592017 AGPAT4-IT1Q9H0P7 198 aa9.94□□□□□ -0.82
CLIP3-205ENST00000592017 APLNQ9ULZ1 77 aa9.94□□□□□ -0.82
CLIP3-205ENST00000592017 DAD1P61803 113 aa9.93□□□□□ -0.82
CLIP3-205ENST00000592017 SERF2P84101 59 aa9.93□□□□□ -0.82
CLIP3-205ENST00000592017 BTN1A1Q13410 526 aa9.93□□□□□ -0.82
CLIP3-205ENST00000592017 IQCF2Q8IXL9 164 aa9.93□□□□□ -0.82
CLIP3-205ENST00000592017 LYPD1Q8N2G4 141 aa9.93□□□□□ -0.82
CLIP3-205ENST00000592017 Q8TAT8 98 aa9.93□□□□□ -0.82
CLIP3-205ENST00000592017 RAB24Q969Q5 203 aa9.93□□□□□ -0.82
CLIP3-205ENST00000592017 C16orf74Q96GX8 76 aa9.93□□□□□ -0.82
CLIP3-205ENST00000592017 C20orf144Q9BQM9 153 aa9.93□□□□□ -0.82
CLIP3-205ENST00000592017 C7orf71A4D174 169 aa9.92□□□□□ -0.82
CLIP3-205ENST00000592017 PGPA6NDG6 321 aa9.92□□□□□ -0.82
CLIP3-205ENST00000592017 FAM74A1Q5RGS3 127 aa9.92□□□□□ -0.82
CLIP3-205ENST00000592017 C9orf47Q6ZRZ4 202 aa9.92□□□□□ -0.82
CLIP3-205ENST00000592017 CMTM2Q8TAZ6 248 aa9.92□□□□□ -0.82
CLIP3-205ENST00000592017 ACTR3CQ9C0K3 210 aaPredicted RBP9.92□□□□□ -0.82
CLIP3-205ENST00000592017 OTORQ9NRC9 128 aa9.92□□□□□ -0.82
CLIP3-205ENST00000592017 IGHV4-4A0A075B6R2 117 aa9.91□□□□□ -0.82
CLIP3-205ENST00000592017 TAAR5O14804 337 aa9.91□□□□□ -0.82
CLIP3-205ENST00000592017 SLC25A5P05141 298 aaKnown RBP9.91□□□□□ -0.82
CLIP3-205ENST00000592017 GPX1P07203 203 aa9.91□□□□□ -0.82
CLIP3-205ENST00000592017 STAG3L2P0CL84 134 aa9.91□□□□□ -0.82
CLIP3-205ENST00000592017 STAG3L3P0CL85 134 aa9.91□□□□□ -0.82
CLIP3-205ENST00000592017 RNASE4P34096 147 aaKnown RBP9.91□□□□□ -0.82
CLIP3-205ENST00000592017 TCTAP57738 103 aa9.91□□□□□ -0.82
CLIP3-205ENST00000592017 CD300CQ08708 224 aa9.91□□□□□ -0.82
CLIP3-205ENST00000592017 AKR1C8PQ5T2L2 129 aa9.91□□□□□ -0.82
CLIP3-205ENST00000592017 CCDC28AQ8IWP9 274 aa9.91□□□□□ -0.82
CLIP3-205ENST00000592017 PLAC8L1A1L4L8 177 aa9.9□□□□□ -0.82
CLIP3-205ENST00000592017 LYRM9A8MSI8 78 aa9.9□□□□□ -0.82
CLIP3-205ENST00000592017 KLLNB2CW77 178 aa9.9□□□□□ -0.82
CLIP3-205ENST00000592017 DIRC3C9JPN6 131 aa9.9□□□□□ -0.82
CLIP3-205ENST00000592017 DEFB130BP0DP73 79 aa9.9□□□□□ -0.82
CLIP3-205ENST00000592017 DEFB130AP0DP74 79 aa9.9□□□□□ -0.82
CLIP3-205ENST00000592017 GCHFRP30047 84 aa9.9□□□□□ -0.82
CLIP3-205ENST00000592017 ZNF138P52744 262 aa9.9□□□□□ -0.82
CLIP3-205ENST00000592017 SSX7Q7RTT5 188 aa9.9□□□□□ -0.82
CLIP3-205ENST00000592017 OR11H4Q8NGC9 324 aa9.9□□□□□ -0.82
CLIP3-205ENST00000592017 RNASE8Q8TDE3 154 aaKnown RBP9.9□□□□□ -0.82
CLIP3-205ENST00000592017 RXFP4Q8TDU9 374 aa9.9□□□□□ -0.82
CLIP3-205ENST00000592017 TMEM263Q8WUH6 116 aaKnown RBP9.9□□□□□ -0.82
CLIP3-205ENST00000592017 FAM19A4Q96LR4 140 aa9.9□□□□□ -0.82
CLIP3-205ENST00000592017 ARPC5LQ9BPX5 153 aa9.9□□□□□ -0.82
CLIP3-205ENST00000592017 CYTL1Q9NRR1 136 aa9.9□□□□□ -0.82
CLIP3-205ENST00000592017 ZNF492Q9P255 531 aa9.9□□□□□ -0.82
CLIP3-205ENST00000592017 RBAKDNA6NC62 111 aa9.89□□□□□ -0.83
CLIP3-205ENST00000592017 CXorf1O96002 111 aa9.89□□□□□ -0.83
CLIP3-205ENST00000592017 CRISP2P16562 243 aa9.89□□□□□ -0.83
CLIP3-205ENST00000592017 GNG5P63218 68 aa9.89□□□□□ -0.83
CLIP3-205ENST00000592017 ZNF345Q14585 488 aa9.89□□□□□ -0.83
CLIP3-205ENST00000592017 PRR9Q5T870 116 aa9.89□□□□□ -0.83
CLIP3-205ENST00000592017 ZNF493Q6ZR52 646 aa9.89□□□□□ -0.83
CLIP3-205ENST00000592017 GOLT1AQ6ZVE7 132 aa9.89□□□□□ -0.83
CLIP3-205ENST00000592017 KCNRGQ8N5I3 272 aa9.89□□□□□ -0.83
CLIP3-205ENST00000592017 ZFAND2AQ8N6M9 145 aa9.89□□□□□ -0.83
CLIP3-205ENST00000592017 PYGO2Q9BRQ0 406 aa9.89□□□□□ -0.83
CLIP3-205ENST00000592017 NOP10Q9NPE3 64 aaKnown RBP9.89□□□□□ -0.83
CLIP3-205ENST00000592017 TIMM8BQ9Y5J9 83 aaPredicted RBP9.89□□□□□ -0.83
CLIP3-205ENST00000592017 DNAH2Q9P225 4427 aa9.89□□□□□ -0.83
CLIP3-205ENST00000592017 ZNF726P1Q15940 193 aa9.88□□□□□ -0.83
CLIP3-205ENST00000592017 TMEM167BQ9NRX6 74 aa9.88□□□□□ -0.83
CLIP3-205ENST00000592017 CTXND1A0A1B0GTU2 59 aa9.87□□□□□ -0.83
CLIP3-205ENST00000592017 KANTRA0A1W2PQU2 76 aa9.87□□□□□ -0.83
CLIP3-205ENST00000592017 CBY3A6NI87 242 aa9.87□□□□□ -0.83
CLIP3-205ENST00000592017 HMSDA8MTL9 139 aa9.87□□□□□ -0.83
CLIP3-205ENST00000592017 SNURFLB1AK76 121 aa9.87□□□□□ -0.83
CLIP3-205ENST00000592017 NDUFAF3Q9BU61 184 aa9.87□□□□□ -0.83
CLIP3-205ENST00000592017 ZNF471Q9BX82 626 aaPredicted RBP9.87□□□□□ -0.83
CLIP3-205ENST00000592017 hCG_2014768A0A024R1R8 64 aa9.86□□□□□ -0.83
CLIP3-205ENST00000592017 TRAV8-1A0A0A6YYK1 113 aa9.86□□□□□ -0.83
CLIP3-205ENST00000592017 A0A0D9SG52 128 aa9.86□□□□□ -0.83
CLIP3-205ENST00000592017 RGS13O14921 159 aa9.86□□□□□ -0.83
CLIP3-205ENST00000592017 BCL2L11O43521 198 aa9.86□□□□□ -0.83
CLIP3-205ENST00000592017 PFDN1O60925 122 aa9.86□□□□□ -0.83
CLIP3-205ENST00000592017 ZNF324O75467 553 aaPredicted RBP9.86□□□□□ -0.83
CLIP3-205ENST00000592017 NMBP08949 121 aa9.86□□□□□ -0.83
CLIP3-205ENST00000592017 FGF8P55075 233 aaPredicted RBP9.86□□□□□ -0.83
CLIP3-205ENST00000592017 Q6ZQT7 251 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms