RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 IL17RELQ6ZVW7 336 aa10.68□□□□□ -0.7
SMARCA4-216ENST00000591545 CUL9Q8IWT3 2517 aa10.68□□□□□ -0.7
SMARCA4-216ENST00000591545 GAGE1Q13065 139 aa10.68□□□□□ -0.7
SMARCA4-216ENST00000591545 NOTCH3Q9UM47 2321 aa10.68□□□□□ -0.7
SMARCA4-216ENST00000591545 TRBV20-1A0A075B6N2 111 aa10.67□□□□□ -0.7
SMARCA4-216ENST00000591545 DEFB131AP59861 70 aa10.67□□□□□ -0.7
SMARCA4-216ENST00000591545 SHISA9B4DS77 424 aa10.67□□□□□ -0.7
SMARCA4-216ENST00000591545 PSCAO43653 123 aa10.67□□□□□ -0.7
SMARCA4-216ENST00000591545 OCIAD2Q56VL3 154 aa10.67□□□□□ -0.7
SMARCA4-216ENST00000591545 GTF3C1Q12789 2109 aa10.67□□□□□ -0.7
SMARCA4-216ENST00000591545 ADAMTSL5Q6ZMM2 481 aa10.67□□□□□ -0.7
SMARCA4-216ENST00000591545 KAAG1Q9UBP8 84 aa10.67□□□□□ -0.7
SMARCA4-216ENST00000591545 IGKV1-16P04430 117 aa10.67□□□□□ -0.7
SMARCA4-216ENST00000591545 FAM104BQ5XKR9 115 aa10.67□□□□□ -0.7
SMARCA4-216ENST00000591545 Q8N8P6 123 aa10.67□□□□□ -0.7
SMARCA4-216ENST00000591545 IGKV1-6A0A0C4DH72 117 aa10.66□□□□□ -0.7
SMARCA4-216ENST00000591545 A0A1W2PPI3 338 aa10.66□□□□□ -0.7
SMARCA4-216ENST00000591545 EREGO14944 169 aa10.66□□□□□ -0.7
SMARCA4-216ENST00000591545 ARMS2P0C7Q2 107 aa10.66□□□□□ -0.7
SMARCA4-216ENST00000591545 LINC00311Q8N616 119 aa10.66□□□□□ -0.7
SMARCA4-216ENST00000591545 KIAA2026Q5HYC2 2103 aa10.66□□□□□ -0.7
SMARCA4-216ENST00000591545 C9JQL5 133 aa10.66□□□□□ -0.7
SMARCA4-216ENST00000591545 IGHV2-5P01817 119 aa10.66□□□□□ -0.7
SMARCA4-216ENST00000591545 ELANEP08246 267 aa10.66□□□□□ -0.7
SMARCA4-216ENST00000591545 ZNF581Q9P0T4 197 aa10.66□□□□□ -0.7
SMARCA4-216ENST00000591545 LAMTOR3Q9UHA4 124 aa10.66□□□□□ -0.7
SMARCA4-216ENST00000591545 DOCK10Q96BY6 2186 aa10.66□□□□□ -0.7
SMARCA4-216ENST00000591545 C6orf226Q5I0X4 101 aa10.66□□□□□ -0.7
SMARCA4-216ENST00000591545 NDUFA4L2Q9NRX3 87 aa10.66□□□□□ -0.7
SMARCA4-216ENST00000591545 HIST1H4AP62805 103 aaKnown RBP10.65□□□□□ -0.7
SMARCA4-216ENST00000591545 PRIMA1Q86XR5 153 aa10.65□□□□□ -0.7
SMARCA4-216ENST00000591545 VWC2LB2RUY7 222 aa10.65□□□□□ -0.7
SMARCA4-216ENST00000591545 NDUFS7O75251 213 aa10.65□□□□□ -0.7
SMARCA4-216ENST00000591545 INAFM2P0DMQ5 153 aa10.65□□□□□ -0.7
SMARCA4-216ENST00000591545 FXYD7P58549 80 aa10.65□□□□□ -0.7
SMARCA4-216ENST00000591545 MED13LQ71F56 2210 aa10.65□□□□□ -0.7
SMARCA4-216ENST00000591545 LTBP2Q14767 1821 aa10.65□□□□□ -0.71
SMARCA4-216ENST00000591545 C5orf24Q7Z6I8 188 aa10.65□□□□□ -0.71
SMARCA4-216ENST00000591545 TMEM14CQ9P0S9 112 aa10.65□□□□□ -0.71
SMARCA4-216ENST00000591545 TP53BP1Q12888 1972 aaPredicted RBP10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 OBSL1O75147 1896 aa10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 SMKR1H3BMG3 65 aa10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 APOC4P55056 127 aa10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 C1orf147Q96MC9 270 aaPredicted RBP10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 GTSF1LQ9H1H1 148 aa10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 KLF12Q9Y4X4 402 aa10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 SPINK8P0C7L1 97 aa10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 PAX9P55771 341 aa10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 DAZAP2Q15038 168 aaPredicted RBP10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 C1orf159Q96HA4 380 aa10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 A0A1B0GUS0 222 aa10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 ZNF503-AS2A6NEH8 195 aa10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 VPREB3Q9UKI3 123 aa10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 TRBV19A0A075B6N1 114 aa10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 ADORA2A-AS1P86434 159 aa10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 SS18Q15532 418 aa10.64□□□□□ -0.71
SMARCA4-216ENST00000591545 G3V318 75 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 LGALS9BQ3B8N2 356 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 LGALS9CQ6DKI2 356 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 ZNF833PQ6ZTB9 187 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 C9JAW5 83 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 IGLC2P0DOY2 106 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 IGLC3P0DOY3 106 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 NPC2P61916 151 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 DKK4Q9UBT3 224 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 TRAV8-3A0A0A6YYJ7 113 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 C9orf118A6NHY6 69 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 OR11H6Q8NGC7 330 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 C11orf52Q96A22 123 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 IGHV3-73A0A0B4J1V6 119 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 F8WEM9 126 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 DEFB130BP0DP73 79 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 DEFB130AP0DP74 79 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 SNHG12Q9BXW3 62 aa10.63□□□□□ -0.71
SMARCA4-216ENST00000591545 SMIM27A0A1W2PRY6 76 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 LINC00479Q96M42 142 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 HS3ST6Q96QI5 342 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 ZMAT4Q9H898 229 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 ZNRD1Q9P1U0 126 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 ZNF106Q9H2Y7 1883 aaKnown RBP10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 LRRK1Q38SD2 2015 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 IGHV3-53P01767 116 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 LINC00205P59089 165 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 DEFB112Q30KQ8 113 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 MAJINQ3KP22 176 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 KIF26AQ9ULI4 1882 aaPredicted RBP10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 IGHV1-24A0A0C4DH33 117 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 TAL2Q16559 108 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 C2orf66Q6UXQ4 117 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 V9GYV3 84 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 PMVKQ15126 192 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 MLANAQ16655 118 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 WDR86Q86TI4 376 aa10.62□□□□□ -0.71
SMARCA4-216ENST00000591545 C17orf58Q2M2W7 97 aa10.61□□□□□ -0.71
SMARCA4-216ENST00000591545 TCTEX1D4Q5JR98 221 aa10.61□□□□□ -0.71
SMARCA4-216ENST00000591545 DUX4L9Q6RFH8 374 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-216ENST00000591545 STPG4Q8N801 248 aa10.61□□□□□ -0.71
SMARCA4-216ENST00000591545 PIEZO1Q92508 2521 aa10.61□□□□□ -0.71
SMARCA4-216ENST00000591545 IGHV4-61A0A0C4DH41 118 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms