RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 ZNF586Q9NXT0 402 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 TMEM14CQ9P0S9 112 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 RPH3ALQ9UNE2 315 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 AGRNO00468 2067 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 DNAH9Q9NYC9 4486 aa4.72□□□□□ -1.65
VPS4B-205ENST00000591383 TRBV19A0A075B6N1 114 aa4.72□□□□□ -1.65
VPS4B-205ENST00000591383 LOC102724200A0A096LPH7 203 aaPredicted RBP4.72□□□□□ -1.65
VPS4B-205ENST00000591383 CTXND1A0A1B0GTU2 59 aa4.72□□□□□ -1.65
VPS4B-205ENST00000591383 RBMY1BA6NDE4 496 aaKnown RBP4.72□□□□□ -1.65
VPS4B-205ENST00000591383 RBMY1EA6NEQ0 496 aaKnown RBP4.72□□□□□ -1.65
VPS4B-205ENST00000591383 CA1P00915 261 aaPredicted RBP4.72□□□□□ -1.65
VPS4B-205ENST00000591383 RBMY1DP0C7P1 496 aaKnown RBP4.72□□□□□ -1.65
VPS4B-205ENST00000591383 GCHFRP30047 84 aa4.72□□□□□ -1.65
VPS4B-205ENST00000591383 FHITP49789 147 aa4.72□□□□□ -1.65
VPS4B-205ENST00000591383 APOC4P55056 127 aa4.72□□□□□ -1.65
VPS4B-205ENST00000591383 FGF8P55075 233 aaPredicted RBP4.72□□□□□ -1.65
VPS4B-205ENST00000591383 HIST1H1AQ02539 215 aaPredicted RBP4.72□□□□□ -1.65
VPS4B-205ENST00000591383 ZNF726P1Q15940 193 aa4.72□□□□□ -1.65
VPS4B-205ENST00000591383 FAM74A1Q5RGS3 127 aa4.72□□□□□ -1.65
VPS4B-205ENST00000591383 GDF5OSQ5U4N7 250 aa4.72□□□□□ -1.65
VPS4B-205ENST00000591383 EIF5AL1Q6IS14 154 aaKnown RBP4.72□□□□□ -1.65
VPS4B-205ENST00000591383 EBLN2Q6P2I7 272 aa4.72□□□□□ -1.65
VPS4B-205ENST00000591383 FOXI2Q6ZQN5 318 aa4.72□□□□□ -1.65
VPS4B-205ENST00000591383 RPP25LQ8N5L8 163 aaKnown RBP4.72□□□□□ -1.65
VPS4B-205ENST00000591383 OR4B1Q8NGF8 309 aa4.72□□□□□ -1.65
VPS4B-205ENST00000591383 TMEM18Q96B42 140 aa4.72□□□□□ -1.65
VPS4B-205ENST00000591383 RPUSD4Q96CM3 377 aaKnown RBP4.72□□□□□ -1.65
VPS4B-205ENST00000591383 FXYD5Q96DB9 178 aa4.72□□□□□ -1.65
VPS4B-205ENST00000591383 B9D2Q9BPU9 175 aa4.72□□□□□ -1.65
VPS4B-205ENST00000591383 IGKV2-40A0A087WW87 121 aaPredicted RBP4.71□□□□□ -1.66
VPS4B-205ENST00000591383 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 ZNF705FA8MVS1 300 aaPredicted RBP4.71□□□□□ -1.66
VPS4B-205ENST00000591383 UMAD1C9J7I0 102 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 M0R3E3 92 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 CXorf1O96002 111 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 IGKV2D-40P01614 121 aaPredicted RBP4.71□□□□□ -1.66
VPS4B-205ENST00000591383 SEC11BP0C7V7 166 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 ZNF705DP0CH99 300 aaPredicted RBP4.71□□□□□ -1.66
VPS4B-205ENST00000591383 ZNF705BP0CI00 300 aaPredicted RBP4.71□□□□□ -1.66
VPS4B-205ENST00000591383 STAG3L2P0CL84 134 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 STAG3L3P0CL85 134 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 HLA-DRB4P13762 266 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 FXYD7P58549 80 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 UBE2G2P60604 165 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 PSG9Q00887 426 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 PDE6HQ13956 83 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 PSG3Q16557 428 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 DEFB135Q30KP9 77 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 PIK3CD-AS1Q5SR53 167 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 ALKAL2Q6UX46 152 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 TRPT1Q86TN4 253 aaKnown RBP4.71□□□□□ -1.66
VPS4B-205ENST00000591383 EXOC3-AS1Q8N2X6 119 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 OR10J6PQ8NGY7 276 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 Q9H3A6 140 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 SAV1Q9H4B6 383 aaPredicted RBP4.71□□□□□ -1.66
VPS4B-205ENST00000591383 ZNF331Q9NQX6 463 aaPredicted RBP4.71□□□□□ -1.66
VPS4B-205ENST00000591383 HLA-DRB4X5D2U9 266 aa4.71□□□□□ -1.66
VPS4B-205ENST00000591383 A0A0J9YX75 114 aa4.7□□□□□ -1.66
VPS4B-205ENST00000591383 PRAC2D3DTV9 90 aa4.7□□□□□ -1.66
VPS4B-205ENST00000591383 ZNF253O75346 499 aa4.7□□□□□ -1.66
VPS4B-205ENST00000591383 NDUFB4O95168 129 aa4.7□□□□□ -1.66
VPS4B-205ENST00000591383 NBEAP1P0C6P0 100 aa4.7□□□□□ -1.66
VPS4B-205ENST00000591383 CSN1S1P47710 185 aa4.7□□□□□ -1.66
VPS4B-205ENST00000591383 CNN1P51911 297 aaKnown RBP4.7□□□□□ -1.66
VPS4B-205ENST00000591383 RANP62826 216 aaKnown RBP4.7□□□□□ -1.66
VPS4B-205ENST00000591383 HAGHQ16775 308 aa4.7□□□□□ -1.66
VPS4B-205ENST00000591383 ZNF674Q2M3X9 581 aa4.7□□□□□ -1.66
VPS4B-205ENST00000591383 SBSPONQ8IVN8 264 aa4.7□□□□□ -1.66
VPS4B-205ENST00000591383 OR8A1Q8NGG7 326 aa4.7□□□□□ -1.66
VPS4B-205ENST00000591383 CMTM2Q8TAZ6 248 aa4.7□□□□□ -1.66
VPS4B-205ENST00000591383 SFT2D1Q8WV19 159 aa4.7□□□□□ -1.66
VPS4B-205ENST00000591383 TMEM167BQ9NRX6 74 aa4.7□□□□□ -1.66
VPS4B-205ENST00000591383 HUWE1Q7Z6Z7 4374 aaKnown RBP4.7□□□□□ -1.66
VPS4B-205ENST00000591383 A4D1N5 150 aa4.69□□□□□ -1.66
VPS4B-205ENST00000591383 ZNF705EA8MWA4 302 aaPredicted RBP4.69□□□□□ -1.66
VPS4B-205ENST00000591383 GGTLC3B5MD39 225 aa4.69□□□□□ -1.66
VPS4B-205ENST00000591383 H3BMM0 161 aa4.69□□□□□ -1.66
VPS4B-205ENST00000591383 M0R2Z0 102 aa4.69□□□□□ -1.66
VPS4B-205ENST00000591383 DUSP14O95147 198 aaKnown RBP4.69□□□□□ -1.66
VPS4B-205ENST00000591383 SLC25A5P05141 298 aaKnown RBP4.69□□□□□ -1.66
VPS4B-205ENST00000591383 GNG5P63218 68 aa4.69□□□□□ -1.66
VPS4B-205ENST00000591383 SPINK13Q1W4C9 94 aa4.69□□□□□ -1.66
VPS4B-205ENST00000591383 MORN3Q6PF18 240 aaPredicted RBP4.69□□□□□ -1.66
VPS4B-205ENST00000591383 DPPA3Q6W0C5 159 aa4.69□□□□□ -1.66
VPS4B-205ENST00000591383 Q8TAT8 98 aa4.69□□□□□ -1.66
VPS4B-205ENST00000591383 MRPL53Q96EL3 112 aaKnown RBP4.69□□□□□ -1.66
VPS4B-205ENST00000591383 SLC35B3Q9H1N7 401 aa4.69□□□□□ -1.66
VPS4B-205ENST00000591383 TMPRSS5Q9H3S3 457 aa4.69□□□□□ -1.66
VPS4B-205ENST00000591383 OTORQ9NRC9 128 aa4.69□□□□□ -1.66
VPS4B-205ENST00000591383 CLEC5AQ9NY25 188 aa4.69□□□□□ -1.66
VPS4B-205ENST00000591383 XCL2Q9UBD3 114 aa4.69□□□□□ -1.66
VPS4B-205ENST00000591383 PRELID1Q9Y255 219 aa4.69□□□□□ -1.66
VPS4B-205ENST00000591383 IGHV3OR16-12A0A075B7B8 117 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 KIR2DL5BA0A0G2JN68 375 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 KIR2DL5BA0A0G2JPC4 375 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 INSP01308 110 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 IFNA7P01567 189 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 VPREB1P12018 145 aa4.68□□□□□ -1.66
VPS4B-205ENST00000591383 SULT1A2P50226 295 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms