RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 PGPA6NDG6 321 aa12.99□□□□□ -0.33
VAT1-208ENST00000590924 TEX46H3BTG2 121 aa12.99□□□□□ -0.33
VAT1-208ENST00000590924 M0R3E3 92 aa12.99□□□□□ -0.33
VAT1-208ENST00000590924 DEFB4AO15263 64 aa12.99□□□□□ -0.33
VAT1-208ENST00000590924 GIG44P09565 113 aaPredicted RBP12.99□□□□□ -0.33
VAT1-208ENST00000590924 TCTAP57738 103 aa12.99□□□□□ -0.33
VAT1-208ENST00000590924 ARL2-SNX15V9GYD0 113 aa12.99□□□□□ -0.33
VAT1-208ENST00000590924 VPS13DQ5THJ4 4388 aa12.99□□□□□ -0.33
VAT1-208ENST00000590924 RBAKDNA6NC62 111 aa12.98□□□□□ -0.33
VAT1-208ENST00000590924 PRAC2D3DTV9 90 aa12.98□□□□□ -0.33
VAT1-208ENST00000590924 NPIPB6E9PJ23 425 aa12.98□□□□□ -0.33
VAT1-208ENST00000590924 BOLA2-SMG1P6H3BVE0 249 aa12.98□□□□□ -0.33
VAT1-208ENST00000590924 AMBPP02760 352 aa12.98□□□□□ -0.33
VAT1-208ENST00000590924 SLC25A5P05141 298 aaKnown RBP12.98□□□□□ -0.33
VAT1-208ENST00000590924 PPT1P50897 306 aa12.98□□□□□ -0.33
VAT1-208ENST00000590924 FGF8P55075 233 aaPredicted RBP12.98□□□□□ -0.33
VAT1-208ENST00000590924 HIST1H1AQ02539 215 aaPredicted RBP12.98□□□□□ -0.33
VAT1-208ENST00000590924 AMTNQ6UX39 209 aa12.98□□□□□ -0.33
VAT1-208ENST00000590924 IQCF2Q8IXL9 164 aa12.98□□□□□ -0.33
VAT1-208ENST00000590924 CMTM2Q8TAZ6 248 aa12.98□□□□□ -0.33
VAT1-208ENST00000590924 C2CD4CQ8TF44 421 aa12.98□□□□□ -0.33
VAT1-208ENST00000590924 LINC00477Q96M19 166 aa12.98□□□□□ -0.33
VAT1-208ENST00000590924 DNAH6Q9C0G6 4158 aa12.98□□□□□ -0.33
VAT1-208ENST00000590924 HBE1P02100 147 aa12.97□□□□□ -0.33
VAT1-208ENST00000590924 ALKAL2Q6UX46 152 aa12.97□□□□□ -0.33
VAT1-208ENST00000590924 C9orf47Q6ZRZ4 202 aa12.97□□□□□ -0.33
VAT1-208ENST00000590924 ODF3Q96PU9 254 aa12.97□□□□□ -0.33
VAT1-208ENST00000590924 TMPRSS5Q9H3S3 457 aa12.97□□□□□ -0.33
VAT1-208ENST00000590924 SERTM2A0A1B0GWG4 89 aa12.96□□□□□ -0.33
VAT1-208ENST00000590924 ZNF705EA8MWA4 302 aaPredicted RBP12.96□□□□□ -0.33
VAT1-208ENST00000590924 IGKV3-20P01619 116 aa12.96□□□□□ -0.33
VAT1-208ENST00000590924 ZNF705DP0CH99 300 aaPredicted RBP12.96□□□□□ -0.33
VAT1-208ENST00000590924 ZNF705BP0CI00 300 aaPredicted RBP12.96□□□□□ -0.33
VAT1-208ENST00000590924 MIFP14174 115 aa12.96□□□□□ -0.33
VAT1-208ENST00000590924 SUMO1P63165 101 aaKnown RBP12.96□□□□□ -0.33
VAT1-208ENST00000590924 C5orf17Q8NAS9 161 aa12.96□□□□□ -0.33
VAT1-208ENST00000590924 DNAH10Q8IVF4 4471 aa12.95□□□□□ -0.34
VAT1-208ENST00000590924 IGHV4-28A0A0C4DH34 117 aa12.95□□□□□ -0.34
VAT1-208ENST00000590924 DIRC3C9JPN6 131 aa12.95□□□□□ -0.34
VAT1-208ENST00000590924 C11orf94C9JXX5 98 aa12.95□□□□□ -0.34
VAT1-208ENST00000590924 RBMY1A1P0DJD3 496 aaKnown RBP12.95□□□□□ -0.34
VAT1-208ENST00000590924 RBMY1CP0DJD4 496 aa12.95□□□□□ -0.34
VAT1-208ENST00000590924 BLOC1S1P78537 153 aa12.95□□□□□ -0.34
VAT1-208ENST00000590924 RBMY1FQ15415 496 aaKnown RBP12.95□□□□□ -0.34
VAT1-208ENST00000590924 PPP1R14DQ9NXH3 145 aa12.95□□□□□ -0.34
VAT1-208ENST00000590924 TRBV7-9A0A0J9YWB2 115 aa12.94□□□□□ -0.34
VAT1-208ENST00000590924 FAM74A7A6NL05 159 aa12.94□□□□□ -0.34
VAT1-208ENST00000590924 TSPOP30536 169 aa12.94□□□□□ -0.34
VAT1-208ENST00000590924 CSNK1G2-AS1Q8NCQ2 148 aa12.94□□□□□ -0.34
VAT1-208ENST00000590924 TCEAL7Q9BRU2 100 aa12.94□□□□□ -0.34
VAT1-208ENST00000590924 AGPAT4-IT1Q9H0P7 198 aa12.94□□□□□ -0.34
VAT1-208ENST00000590924 EPDR1Q9UM22 224 aa12.94□□□□□ -0.34
VAT1-208ENST00000590924 X6R8D5 127 aa12.94□□□□□ -0.34
VAT1-208ENST00000590924 GGTLC3B5MD39 225 aa12.93□□□□□ -0.34
VAT1-208ENST00000590924 NMBP08949 121 aa12.93□□□□□ -0.34
VAT1-208ENST00000590924 TMEM78Q5T7P6 136 aa12.93□□□□□ -0.34
VAT1-208ENST00000590924 SLC35B3Q9H1N7 401 aa12.93□□□□□ -0.34
VAT1-208ENST00000590924 YTHDF2Q9Y5A9 579 aaKnown RBP12.93□□□□□ -0.34
VAT1-208ENST00000590924 LENEPQ9Y5L5 61 aa12.93□□□□□ -0.34
VAT1-208ENST00000590924 FBLL1A6NHQ2 334 aaKnown RBP12.92□□□□□ -0.34
VAT1-208ENST00000590924 CT45A10P0DMU9 189 aa12.92□□□□□ -0.34
VAT1-208ENST00000590924 CDKN1BP46527 198 aa12.92□□□□□ -0.34
VAT1-208ENST00000590924 TEX261Q6UWH6 196 aa12.92□□□□□ -0.34
VAT1-208ENST00000590924 FAM19A4Q96LR4 140 aa12.92□□□□□ -0.34
VAT1-208ENST00000590924 IGF2BP2-AS1Q96M15 143 aa12.92□□□□□ -0.34
VAT1-208ENST00000590924 MANBALQ9NQG1 85 aa12.92□□□□□ -0.34
VAT1-208ENST00000590924 XCL2Q9UBD3 114 aa12.92□□□□□ -0.34
VAT1-208ENST00000590924 APLNQ9ULZ1 77 aa12.92□□□□□ -0.34
VAT1-208ENST00000590924 IGKV2-40A0A087WW87 121 aaPredicted RBP12.91□□□□□ -0.34
VAT1-208ENST00000590924 IGLL5B9A064 214 aa12.91□□□□□ -0.34
VAT1-208ENST00000590924 K7EQM0 130 aa12.91□□□□□ -0.34
VAT1-208ENST00000590924 IGKV2D-40P01614 121 aaPredicted RBP12.91□□□□□ -0.34
VAT1-208ENST00000590924 TCRAP04437 139 aa12.91□□□□□ -0.34
VAT1-208ENST00000590924 LEPP41159 167 aa12.91□□□□□ -0.34
VAT1-208ENST00000590924 ZNF138P52744 262 aa12.91□□□□□ -0.34
VAT1-208ENST00000590924 UBE2G2P60604 165 aa12.91□□□□□ -0.34
VAT1-208ENST00000590924 ERCC8Q13216 396 aa12.91□□□□□ -0.34
VAT1-208ENST00000590924 CCDC28AQ8IWP9 274 aa12.91□□□□□ -0.34
VAT1-208ENST00000590924 LYPD6BQ8NI32 183 aa12.91□□□□□ -0.34
VAT1-208ENST00000590924 HIST1H2BAQ96A08 127 aa12.91□□□□□ -0.34
VAT1-208ENST00000590924 VGLL1Q99990 258 aa12.91□□□□□ -0.34
VAT1-208ENST00000590924 TXNDC17Q9BRA2 123 aa12.91□□□□□ -0.34
VAT1-208ENST00000590924 ZNF492Q9P255 531 aa12.91□□□□□ -0.34
VAT1-208ENST00000590924 F6UZH7 168 aa12.9□□□□□ -0.34
VAT1-208ENST00000590924 PAGE4O60829 102 aa12.9□□□□□ -0.34
VAT1-208ENST00000590924 IFNA7P01567 189 aa12.9□□□□□ -0.34
VAT1-208ENST00000590924 CRISP2P16562 243 aa12.9□□□□□ -0.34
VAT1-208ENST00000590924 CCL20P78556 96 aa12.9□□□□□ -0.34
VAT1-208ENST00000590924 SPINK13Q1W4C9 94 aa12.9□□□□□ -0.34
VAT1-208ENST00000590924 Q6ZTC4 211 aa12.9□□□□□ -0.34
VAT1-208ENST00000590924 C20orf144Q9BQM9 153 aa12.9□□□□□ -0.34
VAT1-208ENST00000590924 ATG101Q9BSB4 218 aa12.9□□□□□ -0.34
VAT1-208ENST00000590924 TRAV10A0A0B4J240 114 aa12.89□□□□□ -0.35
VAT1-208ENST00000590924 A0A1B0GV50 99 aa12.89□□□□□ -0.35
VAT1-208ENST00000590924 M0R2Z0 102 aa12.89□□□□□ -0.35
VAT1-208ENST00000590924 CRXO43186 299 aaPredicted RBP12.89□□□□□ -0.35
VAT1-208ENST00000590924 PRB4P10163 310 aaPredicted RBP12.89□□□□□ -0.35
VAT1-208ENST00000590924 TAGLN2P37802 199 aaKnown RBP12.89□□□□□ -0.35
VAT1-208ENST00000590924 FXYD7P58549 80 aa12.89□□□□□ -0.35
VAT1-208ENST00000590924 CST9LP1Q5W188 147 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms