RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 ACOT6Q3I5F7 207 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-212ENST00000590260 KHDC3LQ587J8 217 aa12.91□□□□□ -0.34
DDX39A-212ENST00000590260 SSX7Q7RTT5 188 aa12.91□□□□□ -0.34
DDX39A-212ENST00000590260 OR10G4Q8NGN3 311 aa12.91□□□□□ -0.34
DDX39A-212ENST00000590260 OR10G9Q8NGN4 311 aa12.91□□□□□ -0.34
DDX39A-212ENST00000590260 OR10G7Q8NGN6 311 aa12.91□□□□□ -0.34
DDX39A-212ENST00000590260 C20orf144Q9BQM9 153 aa12.91□□□□□ -0.34
DDX39A-212ENST00000590260 PSMG3Q9BT73 122 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-212ENST00000590260 Q9H3A6 140 aa12.91□□□□□ -0.34
DDX39A-212ENST00000590260 AAMDCQ9H7C9 122 aa12.91□□□□□ -0.34
DDX39A-212ENST00000590260 H7BYZ3 331 aa12.9□□□□□ -0.34
DDX39A-212ENST00000590260 ZNF324O75467 553 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-212ENST00000590260 LEPP41159 167 aa12.9□□□□□ -0.34
DDX39A-212ENST00000590260 TCTAP57738 103 aa12.9□□□□□ -0.34
DDX39A-212ENST00000590260 BTN1A1Q13410 526 aa12.9□□□□□ -0.34
DDX39A-212ENST00000590260 ZNF266Q14584 549 aa12.9□□□□□ -0.34
DDX39A-212ENST00000590260 ZFAND2AQ8N6M9 145 aa12.9□□□□□ -0.34
DDX39A-212ENST00000590260 LINC00477Q96M19 166 aa12.9□□□□□ -0.34
DDX39A-212ENST00000590260 HTN1P15515 57 aa12.89□□□□□ -0.35
DDX39A-212ENST00000590260 CRISP2P16562 243 aa12.89□□□□□ -0.35
DDX39A-212ENST00000590260 LYPD1Q8N2G4 141 aa12.89□□□□□ -0.35
DDX39A-212ENST00000590260 CYTL1Q9NRR1 136 aa12.89□□□□□ -0.35
DDX39A-212ENST00000590260 ZNF492Q9P255 531 aa12.89□□□□□ -0.35
DDX39A-212ENST00000590260 DNAH10Q8IVF4 4471 aa12.89□□□□□ -0.35
DDX39A-212ENST00000590260 TEX48A0A1B0GUV7 120 aa12.88□□□□□ -0.35
DDX39A-212ENST00000590260 LYRM9A8MSI8 78 aa12.88□□□□□ -0.35
DDX39A-212ENST00000590260 STAG3L2P0CL84 134 aa12.88□□□□□ -0.35
DDX39A-212ENST00000590260 STAG3L3P0CL85 134 aa12.88□□□□□ -0.35
DDX39A-212ENST00000590260 TAS2R45P59539 299 aa12.88□□□□□ -0.35
DDX39A-212ENST00000590260 Q8TAT8 98 aa12.88□□□□□ -0.35
DDX39A-212ENST00000590260 SLC25A5P05141 298 aaKnown RBP12.87□□□□□ -0.35
DDX39A-212ENST00000590260 CDC34P49427 236 aaPredicted RBP12.87□□□□□ -0.35
DDX39A-212ENST00000590260 DAD1P61803 113 aa12.87□□□□□ -0.35
DDX39A-212ENST00000590260 INO80EQ8NBZ0 244 aaPredicted RBP12.87□□□□□ -0.35
DDX39A-212ENST00000590260 OR11H4Q8NGC9 324 aa12.87□□□□□ -0.35
DDX39A-212ENST00000590260 SUN5Q8TC36 379 aa12.87□□□□□ -0.35
DDX39A-212ENST00000590260 TMEM263Q8WUH6 116 aaKnown RBP12.87□□□□□ -0.35
DDX39A-212ENST00000590260 RAB24Q969Q5 203 aa12.87□□□□□ -0.35
DDX39A-212ENST00000590260 C16orf74Q96GX8 76 aa12.87□□□□□ -0.35
DDX39A-212ENST00000590260 C7orf71A4D174 169 aa12.86□□□□□ -0.35
DDX39A-212ENST00000590260 DIRC3C9JPN6 131 aa12.86□□□□□ -0.35
DDX39A-212ENST00000590260 ARL14EPLP0DKL9 152 aa12.86□□□□□ -0.35
DDX39A-212ENST00000590260 ZNF726P1Q15940 193 aa12.86□□□□□ -0.35
DDX39A-212ENST00000590260 PQLC2Q6ZP29 291 aa12.86□□□□□ -0.35
DDX39A-212ENST00000590260 LINC00612Q8N6U2 182 aa12.86□□□□□ -0.35
DDX39A-212ENST00000590260 A0A1W2PPV4 95 aa12.85□□□□□ -0.35
DDX39A-212ENST00000590260 PGPA6NDG6 321 aa12.85□□□□□ -0.35
DDX39A-212ENST00000590260 ARPC5O15511 151 aa12.85□□□□□ -0.35
DDX39A-212ENST00000590260 DEFB130BP0DP73 79 aa12.85□□□□□ -0.35
DDX39A-212ENST00000590260 DEFB130AP0DP74 79 aa12.85□□□□□ -0.35
DDX39A-212ENST00000590260 HTN3P15516 51 aa12.85□□□□□ -0.35
DDX39A-212ENST00000590260 RNASE4P34096 147 aaKnown RBP12.85□□□□□ -0.35
DDX39A-212ENST00000590260 ZNF138P52744 262 aa12.85□□□□□ -0.35
DDX39A-212ENST00000590260 SERF2P84101 59 aa12.85□□□□□ -0.35
DDX39A-212ENST00000590260 TMEM78Q5T7P6 136 aa12.85□□□□□ -0.35
DDX39A-212ENST00000590260 ZNF493Q6ZR52 646 aa12.85□□□□□ -0.35
DDX39A-212ENST00000590260 NOP10Q9NPE3 64 aaKnown RBP12.85□□□□□ -0.35
DDX39A-212ENST00000590260 OTORQ9NRC9 128 aa12.85□□□□□ -0.35
DDX39A-212ENST00000590260 RBAKDNA6NC62 111 aa12.84□□□□□ -0.35
DDX39A-212ENST00000590260 NMBP08949 121 aa12.84□□□□□ -0.35
DDX39A-212ENST00000590260 C11orf72Q8NBR9 251 aa12.84□□□□□ -0.35
DDX39A-212ENST00000590260 HYLS1Q96M11 299 aa12.84□□□□□ -0.35
DDX39A-212ENST00000590260 LINC00467Q9BRT7 94 aa12.84□□□□□ -0.35
DDX39A-212ENST00000590260 TIMM8BQ9Y5J9 83 aaPredicted RBP12.84□□□□□ -0.35
DDX39A-212ENST00000590260 FRAS1Q86XX4 4008 aa12.84□□□□□ -0.35
DDX39A-212ENST00000590260 GCHFRP30047 84 aa12.83□□□□□ -0.36
DDX39A-212ENST00000590260 GNG5P63218 68 aa12.83□□□□□ -0.36
DDX39A-212ENST00000590260 TMEM88Q6PEY1 159 aa12.83□□□□□ -0.36
DDX39A-212ENST00000590260 TVP23CQ96ET8 276 aa12.83□□□□□ -0.36
DDX39A-212ENST00000590260 PYGO2Q9BRQ0 406 aa12.83□□□□□ -0.36
DDX39A-212ENST00000590260 NDUFAF3Q9BU61 184 aa12.83□□□□□ -0.36
DDX39A-212ENST00000590260 TP53TG3Q9ULZ0 132 aa12.83□□□□□ -0.36
DDX39A-212ENST00000590260 GPX1P07203 203 aa12.82□□□□□ -0.36
DDX39A-212ENST00000590260 TRAV8-1A0A0A6YYK1 113 aa12.81□□□□□ -0.36
DDX39A-212ENST00000590260 TRBV7-9A0A0J9YWB2 115 aa12.81□□□□□ -0.36
DDX39A-212ENST00000590260 CBY3A6NI87 242 aa12.81□□□□□ -0.36
DDX39A-212ENST00000590260 CSN1S1P47710 185 aa12.81□□□□□ -0.36
DDX39A-212ENST00000590260 GNPNAT1Q96EK6 184 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-212ENST00000590260 RPH3ALQ9UNE2 315 aa12.81□□□□□ -0.36
DDX39A-212ENST00000590260 DNAH2Q9P225 4427 aa12.8□□□□□ -0.36
DDX39A-212ENST00000590260 BORCS7-ASMTA0A0B4J1R7 106 aa12.8□□□□□ -0.36
DDX39A-212ENST00000590260 MBP02144 154 aa12.8□□□□□ -0.36
DDX39A-212ENST00000590260 ANXA2RQ3ZCQ2 193 aa12.8□□□□□ -0.36
DDX39A-212ENST00000590260 GOLT1AQ6ZVE7 132 aa12.8□□□□□ -0.36
DDX39A-212ENST00000590260 KCNRGQ8N5I3 272 aa12.8□□□□□ -0.36
DDX39A-212ENST00000590260 RXFP4Q8TDU9 374 aa12.8□□□□□ -0.36
DDX39A-212ENST00000590260 FAM210BQ96KR6 192 aa12.8□□□□□ -0.36
DDX39A-212ENST00000590260 BIRC6Q9NR09 4857 aa12.79□□□□□ -0.36
DDX39A-212ENST00000590260 GGTLC3B5MD39 225 aa12.79□□□□□ -0.36
DDX39A-212ENST00000590260 DAZ2Q13117 558 aaKnown RBP12.79□□□□□ -0.36
DDX39A-212ENST00000590260 CCDC28AQ8IWP9 274 aa12.79□□□□□ -0.36
DDX39A-212ENST00000590260 EIF4E3Q8N5X7 224 aaKnown RBP12.79□□□□□ -0.36
DDX39A-212ENST00000590260 ARL6IP6Q8N6S5 226 aa12.79□□□□□ -0.36
DDX39A-212ENST00000590260 ST6GAL2Q96JF0 529 aa12.79□□□□□ -0.36
DDX39A-212ENST00000590260 ACTR3CQ9C0K3 210 aaPredicted RBP12.79□□□□□ -0.36
DDX39A-212ENST00000590260 TMPRSS5Q9H3S3 457 aa12.79□□□□□ -0.36
DDX39A-212ENST00000590260 GSN-AS1Q9NRJ2 163 aa12.79□□□□□ -0.36
DDX39A-212ENST00000590260 KLF12Q9Y4X4 402 aa12.79□□□□□ -0.36
DDX39A-212ENST00000590260 HMSDA8MTL9 139 aa12.78□□□□□ -0.36
DDX39A-212ENST00000590260 TAAR5O14804 337 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms