RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 GCSAMLQ5JQS6 135 aa5.86□□□□□ -1.47
TPM4-211ENST00000589897 TMEM78Q5T7P6 136 aa5.86□□□□□ -1.47
TPM4-211ENST00000589897 FAM122CQ6P4D5 195 aa5.86□□□□□ -1.47
TPM4-211ENST00000589897 EXOC3-AS1Q8N2X6 119 aa5.86□□□□□ -1.47
TPM4-211ENST00000589897 RNASE8Q8TDE3 154 aaKnown RBP5.86□□□□□ -1.47
TPM4-211ENST00000589897 ODF3Q96PU9 254 aa5.86□□□□□ -1.47
TPM4-211ENST00000589897 ATP5SQ99766 215 aa5.86□□□□□ -1.47
TPM4-211ENST00000589897 PYGO2Q9BRQ0 406 aa5.86□□□□□ -1.47
TPM4-211ENST00000589897 MARVELD1Q9BSK0 173 aa5.86□□□□□ -1.47
TPM4-211ENST00000589897 PAXXQ9BUH6 204 aa5.86□□□□□ -1.47
TPM4-211ENST00000589897 MRPL32Q9BYC8 188 aaKnown RBP5.86□□□□□ -1.47
TPM4-211ENST00000589897 WDR61Q9GZS3 305 aaKnown RBP5.86□□□□□ -1.47
TPM4-211ENST00000589897 ABCA13Q86UQ4 5058 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 VPS13DQ5THJ4 4388 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 GAGE12BA1L429 117 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 PLAC8L1A1L4L8 177 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 C7orf71A4D174 169 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 GAGE7O76087 117 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 MPC2O95563 127 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 OR10J4P0C629 311 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 GAGE12FP0CL80 117 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 GAGE12GP0CL81 117 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 GAGE12IP0CL82 117 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 RNASE4P34096 147 aaKnown RBP5.85□□□□□ -1.47
TPM4-211ENST00000589897 FAM3BP58499 235 aaPredicted RBP5.85□□□□□ -1.47
TPM4-211ENST00000589897 TAS2R45P59539 299 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 FFAR4Q5NUL3 377 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 MIR17HGQ75NE6 70 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 Q8N1X5 172 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 GNPNAT1Q96EK6 184 aaPredicted RBP5.85□□□□□ -1.47
TPM4-211ENST00000589897 SLC25A2Q9BXI2 301 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 SMIM3Q9BZL3 60 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 FUT9Q9Y231 359 aa5.85□□□□□ -1.47
TPM4-211ENST00000589897 TRGV2A0A075B6R0 118 aa5.84□□□□□ -1.47
TPM4-211ENST00000589897 H0YIZ8 118 aa5.84□□□□□ -1.47
TPM4-211ENST00000589897 RGS13O14921 159 aa5.84□□□□□ -1.47
TPM4-211ENST00000589897 NDUFB4O95168 129 aa5.84□□□□□ -1.47
TPM4-211ENST00000589897 RPL12P30050 165 aaKnown RBP5.84□□□□□ -1.47
TPM4-211ENST00000589897 H2BFSP57053 126 aa5.84□□□□□ -1.47
TPM4-211ENST00000589897 KHDC3LQ587J8 217 aa5.84□□□□□ -1.47
TPM4-211ENST00000589897 C1orf134Q5TEV5 83 aa5.84□□□□□ -1.47
TPM4-211ENST00000589897 ZNF680Q8NEM1 530 aa5.84□□□□□ -1.47
TPM4-211ENST00000589897 RNF141Q8WVD5 230 aa5.84□□□□□ -1.47
TPM4-211ENST00000589897 AGPAT4-IT1Q9H0P7 198 aa5.84□□□□□ -1.47
TPM4-211ENST00000589897 HSPB11Q9Y547 144 aa5.84□□□□□ -1.47
TPM4-211ENST00000589897 TRAV26-1A0A087WT03 109 aa5.83□□□□□ -1.48
TPM4-211ENST00000589897 IGKV2-40A0A087WW87 121 aaPredicted RBP5.83□□□□□ -1.48
TPM4-211ENST00000589897 A0A0J9YY99 117 aa5.83□□□□□ -1.48
TPM4-211ENST00000589897 A0A1W2PPV4 95 aa5.83□□□□□ -1.48
TPM4-211ENST00000589897 RTL8CO15255 209 aa5.83□□□□□ -1.48
TPM4-211ENST00000589897 PFDN1O60925 122 aa5.83□□□□□ -1.48
TPM4-211ENST00000589897 IGKV2D-40P01614 121 aaPredicted RBP5.83□□□□□ -1.48
TPM4-211ENST00000589897 M6PRP20645 277 aa5.83□□□□□ -1.48
TPM4-211ENST00000589897 RANP62826 216 aaKnown RBP5.83□□□□□ -1.48
TPM4-211ENST00000589897 UBE2L3P68036 154 aaKnown RBP5.83□□□□□ -1.48
TPM4-211ENST00000589897 BTN1A1Q13410 526 aa5.83□□□□□ -1.48
TPM4-211ENST00000589897 FAM74A1Q5RGS3 127 aa5.83□□□□□ -1.48
TPM4-211ENST00000589897 C9orf47Q6ZRZ4 202 aa5.83□□□□□ -1.48
TPM4-211ENST00000589897 EIF4E3Q8N5X7 224 aaKnown RBP5.83□□□□□ -1.48
TPM4-211ENST00000589897 CMTM2Q8TAZ6 248 aa5.83□□□□□ -1.48
TPM4-211ENST00000589897 FAM167A-AS1Q96KT0 104 aa5.83□□□□□ -1.48
TPM4-211ENST00000589897 ARPC5LQ9BPX5 153 aa5.83□□□□□ -1.48
TPM4-211ENST00000589897 SCRT2Q9NQ03 307 aa5.83□□□□□ -1.48
TPM4-211ENST00000589897 MBD2Q9UBB5 411 aa5.83□□□□□ -1.48
TPM4-211ENST00000589897 NACAE9PAV3 2078 aa5.83□□□□□ -1.48
TPM4-211ENST00000589897 DNAH10Q8IVF4 4471 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 DNAH6Q9C0G6 4158 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 TRGV1A0A0A0MS02 117 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 KLLNB2CW77 178 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 PTTG1O95997 202 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 NMBP08949 121 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 ZNF138P52744 262 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 CD300CQ08708 224 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 DAZ2Q13117 558 aaKnown RBP5.82□□□□□ -1.48
TPM4-211ENST00000589897 ACOT6Q3I5F7 207 aaPredicted RBP5.82□□□□□ -1.48
TPM4-211ENST00000589897 Q6ZTI0 123 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 ZNF575Q86XF7 245 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 LYPD1Q8N2G4 141 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 RXFP4Q8TDU9 374 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 FXYD5Q96DB9 178 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 PHYHIPLQ96FC7 376 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 HYLS1Q96M11 299 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 VGLL1Q99990 258 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 Q9H3A6 140 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 GSN-AS1Q9NRJ2 163 aa5.82□□□□□ -1.48
TPM4-211ENST00000589897 IGHV1OR15-1A0A075B7D0 117 aa5.81□□□□□ -1.48
TPM4-211ENST00000589897 C16orf90A8MZG2 172 aa5.81□□□□□ -1.48
TPM4-211ENST00000589897 ZNF324O75467 553 aaPredicted RBP5.81□□□□□ -1.48
TPM4-211ENST00000589897 CRISP2P16562 243 aa5.81□□□□□ -1.48
TPM4-211ENST00000589897 ANXA2RQ3ZCQ2 193 aa5.81□□□□□ -1.48
TPM4-211ENST00000589897 Q6ZR54 194 aa5.81□□□□□ -1.48
TPM4-211ENST00000589897 SSX7Q7RTT5 188 aa5.81□□□□□ -1.48
TPM4-211ENST00000589897 MED28Q9H204 178 aa5.81□□□□□ -1.48
TPM4-211ENST00000589897 TMPRSS5Q9H3S3 457 aa5.81□□□□□ -1.48
TPM4-211ENST00000589897 ZNF492Q9P255 531 aa5.81□□□□□ -1.48
TPM4-211ENST00000589897 RPH3ALQ9UNE2 315 aa5.81□□□□□ -1.48
TPM4-211ENST00000589897 NBDYA0A0U1RRE5 68 aa5.8□□□□□ -1.48
TPM4-211ENST00000589897 RBAKDNA6NC62 111 aa5.8□□□□□ -1.48
TPM4-211ENST00000589897 PGPA6NDG6 321 aa5.8□□□□□ -1.48
TPM4-211ENST00000589897 ZNF415Q09FC8 603 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms