RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 PEX7O00628 323 aa10□□□□□ -0.81
VMP1-210ENST00000589823 AMBPP02760 352 aa10□□□□□ -0.81
VMP1-210ENST00000589823 BCL2P10415 239 aa10□□□□□ -0.81
VMP1-210ENST00000589823 TSPOP30536 169 aa10□□□□□ -0.81
VMP1-210ENST00000589823 IFITM2Q01629 132 aa10□□□□□ -0.81
VMP1-210ENST00000589823 CCDC28AQ8IWP9 274 aa10□□□□□ -0.81
VMP1-210ENST00000589823 B9D2Q9BPU9 175 aa10□□□□□ -0.81
VMP1-210ENST00000589823 C1QTNF4Q9BXJ3 329 aa10□□□□□ -0.81
VMP1-210ENST00000589823 AGPAT4-IT1Q9H0P7 198 aa10□□□□□ -0.81
VMP1-210ENST00000589823 SLC35B3Q9H1N7 401 aa10□□□□□ -0.81
VMP1-210ENST00000589823 VAX2Q9UIW0 290 aa10□□□□□ -0.81
VMP1-210ENST00000589823 NMBP08949 121 aa9.99□□□□□ -0.81
VMP1-210ENST00000589823 LEPP41159 167 aa9.99□□□□□ -0.81
VMP1-210ENST00000589823 ZNF138P52744 262 aa9.99□□□□□ -0.81
VMP1-210ENST00000589823 FXYD7P58549 80 aa9.99□□□□□ -0.81
VMP1-210ENST00000589823 AMTNQ6UX39 209 aa9.99□□□□□ -0.81
VMP1-210ENST00000589823 SBSPONQ8IVN8 264 aa9.99□□□□□ -0.81
VMP1-210ENST00000589823 ODF3Q96PU9 254 aa9.99□□□□□ -0.81
VMP1-210ENST00000589823 ASCL2Q99929 193 aa9.99□□□□□ -0.81
VMP1-210ENST00000589823 LOC102723971A0A1B0GUV8 181 aa9.98□□□□□ -0.81
VMP1-210ENST00000589823 RBFOX3A6NFN3 312 aa9.98□□□□□ -0.81
VMP1-210ENST00000589823 FBLL1A6NHQ2 334 aaKnown RBP9.98□□□□□ -0.81
VMP1-210ENST00000589823 M0R2Z0 102 aa9.98□□□□□ -0.81
VMP1-210ENST00000589823 PDE6DO43924 150 aa9.98□□□□□ -0.81
VMP1-210ENST00000589823 CT45A10P0DMU9 189 aa9.98□□□□□ -0.81
VMP1-210ENST00000589823 AKR1C3P42330 323 aa9.98□□□□□ -0.81
VMP1-210ENST00000589823 MEF2BQ02080 365 aaPredicted RBP9.98□□□□□ -0.81
VMP1-210ENST00000589823 SPINK13Q1W4C9 94 aa9.98□□□□□ -0.81
VMP1-210ENST00000589823 TMEM75Q8N9X5 138 aa9.98□□□□□ -0.81
VMP1-210ENST00000589823 NDFIP1Q9BT67 221 aa9.98□□□□□ -0.81
VMP1-210ENST00000589823 EIF5A2Q9GZV4 153 aaKnown RBP9.98□□□□□ -0.81
VMP1-210ENST00000589823 ZNF492Q9P255 531 aa9.98□□□□□ -0.81
VMP1-210ENST00000589823 XCL2Q9UBD3 114 aa9.98□□□□□ -0.81
VMP1-210ENST00000589823 AGRNO00468 2067 aa9.98□□□□□ -0.81
VMP1-210ENST00000589823 FBN3Q75N90 2809 aa9.97□□□□□ -0.81
VMP1-210ENST00000589823 TRAV8-1A0A0A6YYK1 113 aa9.97□□□□□ -0.81
VMP1-210ENST00000589823 SCO2A0A1W2PP80 73 aa9.97□□□□□ -0.81
VMP1-210ENST00000589823 CDKN1BP46527 198 aa9.97□□□□□ -0.81
VMP1-210ENST00000589823 UBE2G1P62253 170 aa9.97□□□□□ -0.81
VMP1-210ENST00000589823 TOR2AQ5JU69 321 aa9.97□□□□□ -0.81
VMP1-210ENST00000589823 Q6ZWC4 215 aa9.97□□□□□ -0.81
VMP1-210ENST00000589823 Q8TAT8 98 aa9.97□□□□□ -0.81
VMP1-210ENST00000589823 FAM210AQ96ND0 272 aa9.97□□□□□ -0.81
VMP1-210ENST00000589823 PSG8Q9UQ74 426 aa9.97□□□□□ -0.81
VMP1-210ENST00000589823 LENEPQ9Y5L5 61 aa9.97□□□□□ -0.81
VMP1-210ENST00000589823 TRAV34A0A0B4J273 112 aa9.96□□□□□ -0.82
VMP1-210ENST00000589823 TRBV7-9A0A0J9YWB2 115 aa9.96□□□□□ -0.82
VMP1-210ENST00000589823 J3KRW8 73 aa9.96□□□□□ -0.82
VMP1-210ENST00000589823 GIG44P09565 113 aaPredicted RBP9.96□□□□□ -0.82
VMP1-210ENST00000589823 FLI1Q01543 452 aaPredicted RBP9.96□□□□□ -0.82
VMP1-210ENST00000589823 DEFB135Q30KP9 77 aa9.96□□□□□ -0.82
VMP1-210ENST00000589823 ZNF506Q5JVG8 444 aa9.96□□□□□ -0.82
VMP1-210ENST00000589823 CLLU1Q5K131 121 aa9.96□□□□□ -0.82
VMP1-210ENST00000589823 PRNTQ86SH4 94 aa9.96□□□□□ -0.82
VMP1-210ENST00000589823 FMC1Q96HJ9 113 aa9.96□□□□□ -0.82
VMP1-210ENST00000589823 SGK494Q96LW2 274 aa9.96□□□□□ -0.82
VMP1-210ENST00000589823 LINC00479Q96M42 142 aa9.96□□□□□ -0.82
VMP1-210ENST00000589823 RCHY1Q96PM5 261 aa9.96□□□□□ -0.82
VMP1-210ENST00000589823 RARRES2Q99969 163 aa9.96□□□□□ -0.82
VMP1-210ENST00000589823 SPATA25Q9BR10 227 aa9.96□□□□□ -0.82
VMP1-210ENST00000589823 ZMAT4Q9H898 229 aa9.96□□□□□ -0.82
VMP1-210ENST00000589823 PRKDCP78527 4128 aaKnown RBP9.96□□□□□ -0.82
VMP1-210ENST00000589823 TRAV12-2A0A075B6T6 113 aa9.95□□□□□ -0.82
VMP1-210ENST00000589823 INSP01308 110 aa9.95□□□□□ -0.82
VMP1-210ENST00000589823 S100A9P06702 114 aaKnown RBP9.95□□□□□ -0.82
VMP1-210ENST00000589823 CRISP2P16562 243 aa9.95□□□□□ -0.82
VMP1-210ENST00000589823 C11orf52Q96A22 123 aa9.95□□□□□ -0.82
VMP1-210ENST00000589823 FAM19A4Q96LR4 140 aa9.95□□□□□ -0.82
VMP1-210ENST00000589823 IGF2BP2-AS1Q96M15 143 aa9.95□□□□□ -0.82
VMP1-210ENST00000589823 SPRY2O43597 315 aa9.94□□□□□ -0.82
VMP1-210ENST00000589823 IGLV2-11P01706 119 aa9.94□□□□□ -0.82
VMP1-210ENST00000589823 GPX1P07203 203 aa9.94□□□□□ -0.82
VMP1-210ENST00000589823 NHLRC4P0CG21 123 aaPredicted RBP9.94□□□□□ -0.82
VMP1-210ENST00000589823 TMEM183BQ1AE95 376 aa9.94□□□□□ -0.82
VMP1-210ENST00000589823 SAPCD1Q5SSQ6 148 aa9.94□□□□□ -0.82
VMP1-210ENST00000589823 C2CD4CQ8TF44 421 aa9.94□□□□□ -0.82
VMP1-210ENST00000589823 RNF183Q96D59 192 aa9.94□□□□□ -0.82
VMP1-210ENST00000589823 TM2D3Q9BRN9 247 aa9.94□□□□□ -0.82
VMP1-210ENST00000589823 TREM1Q9NP99 234 aa9.94□□□□□ -0.82
VMP1-210ENST00000589823 MED9Q9NWA0 146 aa9.94□□□□□ -0.82
VMP1-210ENST00000589823 TP53TG1Q9Y2A0 90 aa9.94□□□□□ -0.82
VMP1-210ENST00000589823 GOLT1BQ9Y3E0 138 aa9.94□□□□□ -0.82
VMP1-210ENST00000589823 KLF12Q9Y4X4 402 aa9.94□□□□□ -0.82
VMP1-210ENST00000589823 DNAH9Q9NYC9 4486 aa9.93□□□□□ -0.82
VMP1-210ENST00000589823 TRBV6-1A0A0K0K1D8 114 aa9.93□□□□□ -0.82
VMP1-210ENST00000589823 C7orf71A4D174 169 aa9.93□□□□□ -0.82
VMP1-210ENST00000589823 RGS13O14921 159 aa9.93□□□□□ -0.82
VMP1-210ENST00000589823 CRXO43186 299 aaPredicted RBP9.93□□□□□ -0.82
VMP1-210ENST00000589823 PEA15Q15121 130 aa9.93□□□□□ -0.82
VMP1-210ENST00000589823 GFI1BQ5VTD9 330 aa9.93□□□□□ -0.82
VMP1-210ENST00000589823 Q86TA4 180 aa9.93□□□□□ -0.82
VMP1-210ENST00000589823 ZFAND2AQ8N6M9 145 aa9.93□□□□□ -0.82
VMP1-210ENST00000589823 CSNK1G2-AS1Q8NCQ2 148 aa9.93□□□□□ -0.82
VMP1-210ENST00000589823 TMEM208Q9BTX3 173 aa9.93□□□□□ -0.82
VMP1-210ENST00000589823 RETNQ9HD89 108 aa9.93□□□□□ -0.82
VMP1-210ENST00000589823 ZFP30Q9Y2G7 519 aa9.93□□□□□ -0.82
VMP1-210ENST00000589823 IGHV3OR16-12A0A075B7B8 117 aa9.92□□□□□ -0.82
VMP1-210ENST00000589823 KLLNB2CW77 178 aa9.92□□□□□ -0.82
VMP1-210ENST00000589823 TMEM250H0YL14 139 aa9.92□□□□□ -0.82
VMP1-210ENST00000589823 NDUFS6O75380 124 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms