RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 KIR2DL5BA0A0G2JN68 375 aa12.53□□□□□ -0.4
SCAMP4-211ENST00000588907 KIR2DL5BA0A0G2JPC4 375 aa12.53□□□□□ -0.4
SCAMP4-211ENST00000588907 AMBPP02760 352 aa12.53□□□□□ -0.4
SCAMP4-211ENST00000588907 TSPOP30536 169 aa12.53□□□□□ -0.4
SCAMP4-211ENST00000588907 APOC4P55056 127 aa12.53□□□□□ -0.4
SCAMP4-211ENST00000588907 UBE2G1P62253 170 aa12.53□□□□□ -0.4
SCAMP4-211ENST00000588907 ZNF124Q15973 351 aa12.53□□□□□ -0.4
SCAMP4-211ENST00000588907 GDF5OSQ5U4N7 250 aa12.53□□□□□ -0.4
SCAMP4-211ENST00000588907 KIR2DL5AQ8N109 375 aa12.53□□□□□ -0.4
SCAMP4-211ENST00000588907 OR4B1Q8NGF8 309 aa12.53□□□□□ -0.4
SCAMP4-211ENST00000588907 KIR2DL5BQ8NHK3 375 aa12.53□□□□□ -0.4
SCAMP4-211ENST00000588907 RARRES2Q99969 163 aa12.53□□□□□ -0.4
SCAMP4-211ENST00000588907 NDFIP1Q9BT67 221 aa12.53□□□□□ -0.4
SCAMP4-211ENST00000588907 TRBV6-1A0A0K0K1D8 114 aa12.52□□□□□ -0.41
SCAMP4-211ENST00000588907 SCO2A0A1W2PP80 73 aa12.52□□□□□ -0.41
SCAMP4-211ENST00000588907 ZNF138P52744 262 aa12.52□□□□□ -0.41
SCAMP4-211ENST00000588907 CITED4Q96RK1 184 aa12.52□□□□□ -0.41
SCAMP4-211ENST00000588907 C1QTNF4Q9BXJ3 329 aa12.52□□□□□ -0.41
SCAMP4-211ENST00000588907 KLF12Q9Y4X4 402 aa12.52□□□□□ -0.41
SCAMP4-211ENST00000588907 LEPP41159 167 aa12.51□□□□□ -0.41
SCAMP4-211ENST00000588907 FLI1Q01543 452 aaPredicted RBP12.51□□□□□ -0.41
SCAMP4-211ENST00000588907 TMEM183BQ1AE95 376 aa12.51□□□□□ -0.41
SCAMP4-211ENST00000588907 SAPCD1Q5SSQ6 148 aa12.51□□□□□ -0.41
SCAMP4-211ENST00000588907 UQCC3Q6UW78 93 aa12.51□□□□□ -0.41
SCAMP4-211ENST00000588907 C2CD4CQ8TF44 421 aa12.51□□□□□ -0.41
SCAMP4-211ENST00000588907 VGLL1Q99990 258 aa12.51□□□□□ -0.41
SCAMP4-211ENST00000588907 AGPAT4-IT1Q9H0P7 198 aa12.51□□□□□ -0.41
SCAMP4-211ENST00000588907 ZNF492Q9P255 531 aa12.51□□□□□ -0.41
SCAMP4-211ENST00000588907 LINC00862A6NCI5 91 aa12.5□□□□□ -0.41
SCAMP4-211ENST00000588907 TAS2R60P59551 318 aa12.5□□□□□ -0.41
SCAMP4-211ENST00000588907 DEFB1P60022 68 aa12.5□□□□□ -0.41
SCAMP4-211ENST00000588907 ZFP30Q9Y2G7 519 aa12.5□□□□□ -0.41
SCAMP4-211ENST00000588907 UBE2CO00762 179 aa12.49□□□□□ -0.41
SCAMP4-211ENST00000588907 ZNF705DP0CH99 300 aaPredicted RBP12.49□□□□□ -0.41
SCAMP4-211ENST00000588907 ZNF705BP0CI00 300 aaPredicted RBP12.49□□□□□ -0.41
SCAMP4-211ENST00000588907 SMIM12Q96EX1 92 aa12.49□□□□□ -0.41
SCAMP4-211ENST00000588907 CSTL1Q9H114 145 aa12.49□□□□□ -0.41
SCAMP4-211ENST00000588907 PSG8Q9UQ74 426 aa12.49□□□□□ -0.41
SCAMP4-211ENST00000588907 K7EIL1 84 aa12.48□□□□□ -0.41
SCAMP4-211ENST00000588907 IGKV3-20P01619 116 aa12.48□□□□□ -0.41
SCAMP4-211ENST00000588907 IGLV2-11P01706 119 aa12.48□□□□□ -0.41
SCAMP4-211ENST00000588907 CT45A10P0DMU9 189 aa12.48□□□□□ -0.41
SCAMP4-211ENST00000588907 CRISP2P16562 243 aa12.48□□□□□ -0.41
SCAMP4-211ENST00000588907 RPL35AP18077 110 aaKnown RBP12.48□□□□□ -0.41
SCAMP4-211ENST00000588907 RPL35P42766 123 aaKnown RBP12.48□□□□□ -0.41
SCAMP4-211ENST00000588907 CDKN1BP46527 198 aa12.48□□□□□ -0.41
SCAMP4-211ENST00000588907 ERCC8Q13216 396 aa12.48□□□□□ -0.41
SCAMP4-211ENST00000588907 AMTNQ6UX39 209 aa12.48□□□□□ -0.41
SCAMP4-211ENST00000588907 Q86TA4 180 aa12.48□□□□□ -0.41
SCAMP4-211ENST00000588907 FAM19A4Q96LR4 140 aa12.48□□□□□ -0.41
SCAMP4-211ENST00000588907 SLC35B3Q9H1N7 401 aa12.48□□□□□ -0.41
SCAMP4-211ENST00000588907 TRAV8-1A0A0A6YYK1 113 aa12.47□□□□□ -0.41
SCAMP4-211ENST00000588907 RBMY1BA6NDE4 496 aaKnown RBP12.47□□□□□ -0.41
SCAMP4-211ENST00000588907 RBMY1EA6NEQ0 496 aaKnown RBP12.47□□□□□ -0.41
SCAMP4-211ENST00000588907 LTAP01374 205 aa12.47□□□□□ -0.41
SCAMP4-211ENST00000588907 RBMY1DP0C7P1 496 aaKnown RBP12.47□□□□□ -0.41
SCAMP4-211ENST00000588907 FAM74A3Q4VXF1 159 aa12.47□□□□□ -0.41
SCAMP4-211ENST00000588907 LINC00322Q6ZN03 302 aaPredicted RBP12.47□□□□□ -0.41
SCAMP4-211ENST00000588907 PRNTQ86SH4 94 aa12.47□□□□□ -0.41
SCAMP4-211ENST00000588907 EIF4E3Q8N5X7 224 aaKnown RBP12.47□□□□□ -0.41
SCAMP4-211ENST00000588907 AGRNO00468 2067 aa12.47□□□□□ -0.41
SCAMP4-211ENST00000588907 CA1P00915 261 aaPredicted RBP12.46□□□□□ -0.41
SCAMP4-211ENST00000588907 SRP19P09132 144 aaKnown RBP12.46□□□□□ -0.41
SCAMP4-211ENST00000588907 FRMD6-AS1P0C7T7 363 aa12.46□□□□□ -0.41
SCAMP4-211ENST00000588907 COMMD7Q86VX2 200 aa12.46□□□□□ -0.41
SCAMP4-211ENST00000588907 Q8TAT8 98 aa12.46□□□□□ -0.41
SCAMP4-211ENST00000588907 MRAPQ8TCY5 172 aa12.46□□□□□ -0.41
SCAMP4-211ENST00000588907 LINC00479Q96M42 142 aa12.46□□□□□ -0.41
SCAMP4-211ENST00000588907 C20orf144Q9BQM9 153 aa12.46□□□□□ -0.41
SCAMP4-211ENST00000588907 TREM1Q9NP99 234 aa12.46□□□□□ -0.41
SCAMP4-211ENST00000588907 TRAV34A0A0B4J273 112 aa12.45□□□□□ -0.42
SCAMP4-211ENST00000588907 KLLNB2CW77 178 aa12.45□□□□□ -0.42
SCAMP4-211ENST00000588907 C9JCJ5 164 aa12.45□□□□□ -0.42
SCAMP4-211ENST00000588907 INSP01308 110 aa12.45□□□□□ -0.42
SCAMP4-211ENST00000588907 PRB2P02812 416 aaPredicted RBP12.45□□□□□ -0.42
SCAMP4-211ENST00000588907 GPX1P07203 203 aa12.45□□□□□ -0.42
SCAMP4-211ENST00000588907 GNG4P50150 75 aa12.45□□□□□ -0.42
SCAMP4-211ENST00000588907 SPINK13Q1W4C9 94 aa12.45□□□□□ -0.42
SCAMP4-211ENST00000588907 PARLQ9H300 379 aa12.45□□□□□ -0.42
SCAMP4-211ENST00000588907 NDUFA5Q16718 116 aa12.44□□□□□ -0.42
SCAMP4-211ENST00000588907 SMUG1Q53HV7 270 aa12.44□□□□□ -0.42
SCAMP4-211ENST00000588907 DEFB121Q5J5C9 76 aa12.44□□□□□ -0.42
SCAMP4-211ENST00000588907 Q6ZWC4 215 aa12.44□□□□□ -0.42
SCAMP4-211ENST00000588907 COX8CQ7Z4L0 72 aa12.44□□□□□ -0.42
SCAMP4-211ENST00000588907 BAGE2Q86Y30 109 aa12.44□□□□□ -0.42
SCAMP4-211ENST00000588907 TMEM183AQ8IXX5 376 aa12.44□□□□□ -0.42
SCAMP4-211ENST00000588907 IGF2BP2-AS1Q96M15 143 aa12.44□□□□□ -0.42
SCAMP4-211ENST00000588907 BIN3Q9NQY0 253 aa12.44□□□□□ -0.42
SCAMP4-211ENST00000588907 M0R2Z0 102 aa12.43□□□□□ -0.42
SCAMP4-211ENST00000588907 PRB4P10163 310 aaPredicted RBP12.43□□□□□ -0.42
SCAMP4-211ENST00000588907 CEBPGP53567 150 aa12.43□□□□□ -0.42
SCAMP4-211ENST00000588907 CENPWQ5EE01 88 aa12.43□□□□□ -0.42
SCAMP4-211ENST00000588907 SOHLH1Q5JUK2 328 aa12.43□□□□□ -0.42
SCAMP4-211ENST00000588907 TMEM256Q8N2U0 113 aa12.43□□□□□ -0.42
SCAMP4-211ENST00000588907 ZFAND2AQ8N6M9 145 aa12.43□□□□□ -0.42
SCAMP4-211ENST00000588907 SGK494Q96LW2 274 aa12.43□□□□□ -0.42
SCAMP4-211ENST00000588907 SMIM7Q9BQ49 75 aa12.43□□□□□ -0.42
SCAMP4-211ENST00000588907 DERL1Q9BUN8 251 aa12.43□□□□□ -0.42
SCAMP4-211ENST00000588907 LY96Q9Y6Y9 160 aa12.43□□□□□ -0.42
SCAMP4-211ENST00000588907 C7orf71A4D174 169 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms