RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 KRTAP9-9Q9BYP9 154 aa8.39□□□□□ -1.07
RFX1-204ENST00000588885 KRTAP9-4Q9BYQ2 154 aa8.39□□□□□ -1.07
RFX1-204ENST00000588885 XCL2Q9UBD3 114 aa8.39□□□□□ -1.07
RFX1-204ENST00000588885 RNF24Q9Y225 148 aa8.39□□□□□ -1.07
RFX1-204ENST00000588885 TRBV19A0A075B6N1 114 aa8.38□□□□□ -1.07
RFX1-204ENST00000588885 IGHV4-28A0A0C4DH34 117 aa8.38□□□□□ -1.07
RFX1-204ENST00000588885 FAM74A7A6NL05 159 aa8.38□□□□□ -1.07
RFX1-204ENST00000588885 GGTLC3B5MD39 225 aa8.38□□□□□ -1.07
RFX1-204ENST00000588885 NDUFB4O95168 129 aa8.38□□□□□ -1.07
RFX1-204ENST00000588885 RBMY1A1P0DJD3 496 aaKnown RBP8.38□□□□□ -1.07
RFX1-204ENST00000588885 RBMY1CP0DJD4 496 aa8.38□□□□□ -1.07
RFX1-204ENST00000588885 ID1P41134 155 aa8.38□□□□□ -1.07
RFX1-204ENST00000588885 PPT1P50897 306 aa8.38□□□□□ -1.07
RFX1-204ENST00000588885 RBMY1FQ15415 496 aaKnown RBP8.38□□□□□ -1.07
RFX1-204ENST00000588885 ZNF506Q5JVG8 444 aa8.38□□□□□ -1.07
RFX1-204ENST00000588885 GDF5OSQ5U4N7 250 aa8.38□□□□□ -1.07
RFX1-204ENST00000588885 SLC7A5P1Q8MH63 180 aa8.38□□□□□ -1.07
RFX1-204ENST00000588885 RXFP4Q8TDU9 374 aa8.38□□□□□ -1.07
RFX1-204ENST00000588885 LINC00476Q8WZB0 136 aa8.38□□□□□ -1.07
RFX1-204ENST00000588885 GPR82Q96P67 336 aa8.38□□□□□ -1.07
RFX1-204ENST00000588885 C11orf68Q9H3H3 251 aaKnown RBP8.38□□□□□ -1.07
RFX1-204ENST00000588885 RAB19A4D1S5 217 aa8.37□□□□□ -1.07
RFX1-204ENST00000588885 RBFOX3A6NFN3 312 aa8.37□□□□□ -1.07
RFX1-204ENST00000588885 C9JQL5 133 aa8.37□□□□□ -1.07
RFX1-204ENST00000588885 F6UB75 175 aa8.37□□□□□ -1.07
RFX1-204ENST00000588885 NBEAP1P0C6P0 100 aa8.37□□□□□ -1.07
RFX1-204ENST00000588885 IGFL4Q6B9Z1 124 aa8.37□□□□□ -1.07
RFX1-204ENST00000588885 Q8NAQ8 132 aa8.37□□□□□ -1.07
RFX1-204ENST00000588885 CSNK1G2-AS1Q8NCQ2 148 aa8.37□□□□□ -1.07
RFX1-204ENST00000588885 OR4B1Q8NGF8 309 aa8.37□□□□□ -1.07
RFX1-204ENST00000588885 C16orf92Q96LL3 132 aa8.37□□□□□ -1.07
RFX1-204ENST00000588885 C20orf173Q96LM9 149 aa8.37□□□□□ -1.07
RFX1-204ENST00000588885 Q9H3A6 140 aa8.37□□□□□ -1.07
RFX1-204ENST00000588885 ARL2-SNX15V9GYD0 113 aa8.37□□□□□ -1.07
RFX1-204ENST00000588885 X6R8D5 127 aa8.37□□□□□ -1.07
RFX1-204ENST00000588885 KMT2AQ03164 3969 aa8.37□□□□□ -1.07
RFX1-204ENST00000588885 VPS13DQ5THJ4 4388 aa8.36□□□□□ -1.07
RFX1-204ENST00000588885 C11orf94C9JXX5 98 aa8.36□□□□□ -1.07
RFX1-204ENST00000588885 SOCS3O14543 225 aa8.36□□□□□ -1.07
RFX1-204ENST00000588885 PRB4P10163 310 aaPredicted RBP8.36□□□□□ -1.07
RFX1-204ENST00000588885 HLA-DRB4P13762 266 aa8.36□□□□□ -1.07
RFX1-204ENST00000588885 HLA-DMBP28068 263 aa8.36□□□□□ -1.07
RFX1-204ENST00000588885 NUTF2P61970 127 aaKnown RBP8.36□□□□□ -1.07
RFX1-204ENST00000588885 NDUFA5Q16718 116 aa8.36□□□□□ -1.07
RFX1-204ENST00000588885 CST9LP1Q5W188 147 aa8.36□□□□□ -1.07
RFX1-204ENST00000588885 EXOC3-AS1Q8N2X6 119 aa8.36□□□□□ -1.07
RFX1-204ENST00000588885 EIF5A2Q9GZV4 153 aaKnown RBP8.36□□□□□ -1.07
RFX1-204ENST00000588885 TREM1Q9NP99 234 aa8.36□□□□□ -1.07
RFX1-204ENST00000588885 VAX2Q9UIW0 290 aa8.36□□□□□ -1.07
RFX1-204ENST00000588885 HLA-DRB4X5D2U9 266 aa8.36□□□□□ -1.07
RFX1-204ENST00000588885 IGHV3OR16-12A0A075B7B8 117 aa8.35□□□□□ -1.07
RFX1-204ENST00000588885 TRAV8-2A0A0B4J237 113 aa8.35□□□□□ -1.07
RFX1-204ENST00000588885 SCO2A0A1W2PP80 73 aa8.35□□□□□ -1.07
RFX1-204ENST00000588885 A0A1W2PRE2 83 aa8.35□□□□□ -1.07
RFX1-204ENST00000588885 MIFP14174 115 aa8.35□□□□□ -1.07
RFX1-204ENST00000588885 RANP62826 216 aaKnown RBP8.35□□□□□ -1.07
RFX1-204ENST00000588885 GNG5P63218 68 aa8.35□□□□□ -1.07
RFX1-204ENST00000588885 MEF2BQ02080 365 aaPredicted RBP8.35□□□□□ -1.07
RFX1-204ENST00000588885 PDE6HQ13956 83 aa8.35□□□□□ -1.07
RFX1-204ENST00000588885 FOXI2Q6ZQN5 318 aa8.35□□□□□ -1.07
RFX1-204ENST00000588885 SAV1Q9H4B6 383 aaPredicted RBP8.35□□□□□ -1.07
RFX1-204ENST00000588885 ISLRO14498 428 aa8.34□□□□□ -1.07
RFX1-204ENST00000588885 ZNF253O75346 499 aa8.34□□□□□ -1.07
RFX1-204ENST00000588885 SRP19P09132 144 aaKnown RBP8.34□□□□□ -1.07
RFX1-204ENST00000588885 TAGLN2P37802 199 aaKnown RBP8.34□□□□□ -1.07
RFX1-204ENST00000588885 EMP1P54849 157 aa8.34□□□□□ -1.07
RFX1-204ENST00000588885 PEA15Q15121 130 aa8.34□□□□□ -1.07
RFX1-204ENST00000588885 EBLN2Q6P2I7 272 aa8.34□□□□□ -1.07
RFX1-204ENST00000588885 UQCC3Q6UW78 93 aa8.34□□□□□ -1.07
RFX1-204ENST00000588885 EIF4E3Q8N5X7 224 aaKnown RBP8.34□□□□□ -1.07
RFX1-204ENST00000588885 RNF182Q8N6D2 247 aa8.34□□□□□ -1.07
RFX1-204ENST00000588885 SLC50A1Q9BRV3 221 aa8.34□□□□□ -1.07
RFX1-204ENST00000588885 SLC35B3Q9H1N7 401 aa8.34□□□□□ -1.07
RFX1-204ENST00000588885 ZNF331Q9NQX6 463 aaPredicted RBP8.34□□□□□ -1.07
RFX1-204ENST00000588885 OTORQ9NRC9 128 aa8.34□□□□□ -1.07
RFX1-204ENST00000588885 RPH3ALQ9UNE2 315 aa8.34□□□□□ -1.07
RFX1-204ENST00000588885 KRTAP4-8A0A0G2JLE6 195 aa8.33□□□□□ -1.08
RFX1-204ENST00000588885 IGLL5B9A064 214 aa8.33□□□□□ -1.08
RFX1-204ENST00000588885 M0R3E3 92 aa8.33□□□□□ -1.08
RFX1-204ENST00000588885 SLC25A5P05141 298 aaKnown RBP8.33□□□□□ -1.08
RFX1-204ENST00000588885 ZNF705DP0CH99 300 aaPredicted RBP8.33□□□□□ -1.08
RFX1-204ENST00000588885 ZNF705BP0CI00 300 aaPredicted RBP8.33□□□□□ -1.08
RFX1-204ENST00000588885 MEOX2P50222 304 aa8.33□□□□□ -1.08
RFX1-204ENST00000588885 CEBPGP53567 150 aa8.33□□□□□ -1.08
RFX1-204ENST00000588885 SUMO1P63165 101 aaKnown RBP8.33□□□□□ -1.08
RFX1-204ENST00000588885 CCDC28AQ8IWP9 274 aa8.33□□□□□ -1.08
RFX1-204ENST00000588885 CYB561D1Q8N8Q1 229 aa8.33□□□□□ -1.08
RFX1-204ENST00000588885 C11orf52Q96A22 123 aa8.33□□□□□ -1.08
RFX1-204ENST00000588885 C1QTNF4Q9BXJ3 329 aa8.33□□□□□ -1.08
RFX1-204ENST00000588885 CELA1Q9UNI1 258 aa8.33□□□□□ -1.08
RFX1-204ENST00000588885 DNAH10Q8IVF4 4471 aa8.32□□□□□ -1.08
RFX1-204ENST00000588885 PGPA6NDG6 321 aa8.32□□□□□ -1.08
RFX1-204ENST00000588885 F6UZH7 168 aa8.32□□□□□ -1.08
RFX1-204ENST00000588885 PEX7O00628 323 aa8.32□□□□□ -1.08
RFX1-204ENST00000588885 SFTA3P0C7M3 94 aa8.32□□□□□ -1.08
RFX1-204ENST00000588885 ADCYAP1P18509 176 aa8.32□□□□□ -1.08
RFX1-204ENST00000588885 PSG9Q00887 426 aa8.32□□□□□ -1.08
RFX1-204ENST00000588885 Q6ZTC4 211 aa8.32□□□□□ -1.08
RFX1-204ENST00000588885 C5orf17Q8NAS9 161 aa8.32□□□□□ -1.08
RFX1-204ENST00000588885 C2CD4CQ8TF44 421 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms