RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 J3KRW8 73 aa13.47□□□□□ -0.25
ERCC1-207ENST00000588738 C12orf74Q32Q52 190 aa13.47□□□□□ -0.25
ERCC1-207ENST00000588738 GFI1BQ5VTD9 330 aa13.47□□□□□ -0.25
ERCC1-207ENST00000588738 Q6ZNX1 250 aa13.47□□□□□ -0.25
ERCC1-207ENST00000588738 Q6ZTC4 211 aa13.47□□□□□ -0.25
ERCC1-207ENST00000588738 VGLL1Q99990 258 aa13.47□□□□□ -0.25
ERCC1-207ENST00000588738 DKK2Q9UBU2 259 aa13.47□□□□□ -0.25
ERCC1-207ENST00000588738 YTHDF2Q9Y5A9 579 aaKnown RBP13.47□□□□□ -0.25
ERCC1-207ENST00000588738 TRAV10A0A0B4J240 114 aa13.46□□□□□ -0.25
ERCC1-207ENST00000588738 RBAKDNA6NC62 111 aa13.46□□□□□ -0.25
ERCC1-207ENST00000588738 PGPA6NDG6 321 aa13.46□□□□□ -0.25
ERCC1-207ENST00000588738 CXorf1O96002 111 aa13.46□□□□□ -0.25
ERCC1-207ENST00000588738 PRM2P04554 102 aa13.46□□□□□ -0.25
ERCC1-207ENST00000588738 SLC25A5P05141 298 aaKnown RBP13.46□□□□□ -0.25
ERCC1-207ENST00000588738 HTN1P15515 57 aa13.46□□□□□ -0.25
ERCC1-207ENST00000588738 AKR1C8PQ5T2L2 129 aa13.46□□□□□ -0.25
ERCC1-207ENST00000588738 FAM222AQ5U5X8 452 aa13.46□□□□□ -0.25
ERCC1-207ENST00000588738 CMTM2Q8TAZ6 248 aa13.46□□□□□ -0.25
ERCC1-207ENST00000588738 C2CD4CQ8TF44 421 aa13.46□□□□□ -0.25
ERCC1-207ENST00000588738 HYLS1Q96M11 299 aa13.46□□□□□ -0.25
ERCC1-207ENST00000588738 TRAV12-3A0A0B4J271 114 aa13.45□□□□□ -0.26
ERCC1-207ENST00000588738 GCHFRP30047 84 aa13.45□□□□□ -0.26
ERCC1-207ENST00000588738 ZNF767PQ75MW2 155 aa13.45□□□□□ -0.26
ERCC1-207ENST00000588738 FAM19A4Q96LR4 140 aa13.45□□□□□ -0.26
ERCC1-207ENST00000588738 NIPSNAP3BQ9BS92 247 aa13.45□□□□□ -0.26
ERCC1-207ENST00000588738 ZNF492Q9P255 531 aa13.45□□□□□ -0.26
ERCC1-207ENST00000588738 KANTRA0A1W2PQU2 76 aa13.44□□□□□ -0.26
ERCC1-207ENST00000588738 DIRC3C9JPN6 131 aa13.44□□□□□ -0.26
ERCC1-207ENST00000588738 GPX1P07203 203 aa13.44□□□□□ -0.26
ERCC1-207ENST00000588738 NMBP08949 121 aa13.44□□□□□ -0.26
ERCC1-207ENST00000588738 CRISP2P16562 243 aa13.44□□□□□ -0.26
ERCC1-207ENST00000588738 AZU1P20160 251 aa13.44□□□□□ -0.26
ERCC1-207ENST00000588738 ZNF138P52744 262 aa13.44□□□□□ -0.26
ERCC1-207ENST00000588738 ZNF493Q6ZR52 646 aa13.44□□□□□ -0.26
ERCC1-207ENST00000588738 ARL6IP6Q8N6S5 226 aa13.44□□□□□ -0.26
ERCC1-207ENST00000588738 ST6GAL2Q96JF0 529 aa13.44□□□□□ -0.26
ERCC1-207ENST00000588738 TMEM167BQ9NRX6 74 aa13.44□□□□□ -0.26
ERCC1-207ENST00000588738 C7orf71A4D174 169 aa13.43□□□□□ -0.26
ERCC1-207ENST00000588738 KLLNB2CW77 178 aa13.43□□□□□ -0.26
ERCC1-207ENST00000588738 CCDC28AQ8IWP9 274 aa13.43□□□□□ -0.26
ERCC1-207ENST00000588738 SUN5Q8TC36 379 aa13.43□□□□□ -0.26
ERCC1-207ENST00000588738 C16orf74Q96GX8 76 aa13.43□□□□□ -0.26
ERCC1-207ENST00000588738 DEFB131BA0A096LNP1 70 aa13.42□□□□□ -0.26
ERCC1-207ENST00000588738 TRBV7-9A0A0J9YWB2 115 aa13.42□□□□□ -0.26
ERCC1-207ENST00000588738 CTXND1A0A1B0GTU2 59 aa13.42□□□□□ -0.26
ERCC1-207ENST00000588738 BCL2L11O43521 198 aa13.42□□□□□ -0.26
ERCC1-207ENST00000588738 RNASE4P34096 147 aaKnown RBP13.42□□□□□ -0.26
ERCC1-207ENST00000588738 SSX7Q7RTT5 188 aa13.42□□□□□ -0.26
ERCC1-207ENST00000588738 PYGO2Q9BRQ0 406 aa13.42□□□□□ -0.26
ERCC1-207ENST00000588738 RPH3ALQ9UNE2 315 aa13.42□□□□□ -0.26
ERCC1-207ENST00000588738 LYRM9A8MSI8 78 aa13.41□□□□□ -0.26
ERCC1-207ENST00000588738 IGLL5B9A064 214 aa13.41□□□□□ -0.26
ERCC1-207ENST00000588738 TCTAP57738 103 aa13.41□□□□□ -0.26
ERCC1-207ENST00000588738 CD300CQ08708 224 aa13.41□□□□□ -0.26
ERCC1-207ENST00000588738 ZNF726P1Q15940 193 aa13.41□□□□□ -0.26
ERCC1-207ENST00000588738 IQCF2Q8IXL9 164 aa13.41□□□□□ -0.26
ERCC1-207ENST00000588738 TCTE3Q8IZS6 198 aa13.41□□□□□ -0.26
ERCC1-207ENST00000588738 TMEM263Q8WUH6 116 aaKnown RBP13.41□□□□□ -0.26
ERCC1-207ENST00000588738 ZNF471Q9BX82 626 aaPredicted RBP13.41□□□□□ -0.26
ERCC1-207ENST00000588738 DYNC2H1Q8NCM8 4307 aaKnown RBP13.41□□□□□ -0.26
ERCC1-207ENST00000588738 PLAC8L1A1L4L8 177 aa13.4□□□□□ -0.26
ERCC1-207ENST00000588738 PFDN1O60925 122 aa13.4□□□□□ -0.26
ERCC1-207ENST00000588738 ZNF324O75467 553 aaPredicted RBP13.4□□□□□ -0.26
ERCC1-207ENST00000588738 DAD1P61803 113 aa13.4□□□□□ -0.26
ERCC1-207ENST00000588738 EIF5AP63241 154 aaKnown RBP13.4□□□□□ -0.26
ERCC1-207ENST00000588738 BTN1A1Q13410 526 aa13.4□□□□□ -0.26
ERCC1-207ENST00000588738 TMUB2Q71RG4 321 aa13.4□□□□□ -0.26
ERCC1-207ENST00000588738 ZFAND2AQ8N6M9 145 aa13.4□□□□□ -0.26
ERCC1-207ENST00000588738 Q8TAT8 98 aa13.4□□□□□ -0.26
ERCC1-207ENST00000588738 RNASE8Q8TDE3 154 aaKnown RBP13.4□□□□□ -0.26
ERCC1-207ENST00000588738 PLA2G2EQ9NZK7 142 aa13.4□□□□□ -0.26
ERCC1-207ENST00000588738 TIMM8BQ9Y5J9 83 aaPredicted RBP13.4□□□□□ -0.26
ERCC1-207ENST00000588738 LENEPQ9Y5L5 61 aa13.4□□□□□ -0.26
ERCC1-207ENST00000588738 PLECQ15149 4684 aaKnown RBP13.39□□□□□ -0.27
ERCC1-207ENST00000588738 SEC11BP0C7V7 166 aa13.39□□□□□ -0.27
ERCC1-207ENST00000588738 GOLT1AQ6ZVE7 132 aa13.39□□□□□ -0.27
ERCC1-207ENST00000588738 C5orf17Q8NAS9 161 aa13.39□□□□□ -0.27
ERCC1-207ENST00000588738 TMED6Q8WW62 240 aa13.39□□□□□ -0.27
ERCC1-207ENST00000588738 LYSTQ99698 3801 aa13.39□□□□□ -0.27
ERCC1-207ENST00000588738 SUMO1P63165 101 aaKnown RBP13.38□□□□□ -0.27
ERCC1-207ENST00000588738 LINC00476Q8WZB0 136 aa13.38□□□□□ -0.27
ERCC1-207ENST00000588738 SERTM2A0A1B0GWG4 89 aa13.37□□□□□ -0.27
ERCC1-207ENST00000588738 UMAD1C9J7I0 102 aa13.37□□□□□ -0.27
ERCC1-207ENST00000588738 K7EQM0 130 aa13.37□□□□□ -0.27
ERCC1-207ENST00000588738 GNG5P63218 68 aa13.37□□□□□ -0.27
ERCC1-207ENST00000588738 LINC00467Q9BRT7 94 aa13.37□□□□□ -0.27
ERCC1-207ENST00000588738 SACSQ9NZJ4 4579 aa13.36□□□□□ -0.27
ERCC1-207ENST00000588738 RYR3Q15413 4870 aa13.36□□□□□ -0.27
ERCC1-207ENST00000588738 hCG_2014768A0A024R1R8 64 aa13.36□□□□□ -0.27
ERCC1-207ENST00000588738 IGHV4-4A0A075B6R2 117 aa13.36□□□□□ -0.27
ERCC1-207ENST00000588738 A0A1W2PRE2 83 aa13.36□□□□□ -0.27
ERCC1-207ENST00000588738 MAP1LC3B2A6NCE7 125 aa13.36□□□□□ -0.27
ERCC1-207ENST00000588738 SNURFLB1AK76 121 aa13.36□□□□□ -0.27
ERCC1-207ENST00000588738 LY6G6CO95867 125 aa13.36□□□□□ -0.27
ERCC1-207ENST00000588738 DEFB130BP0DP73 79 aa13.36□□□□□ -0.27
ERCC1-207ENST00000588738 DEFB130AP0DP74 79 aa13.36□□□□□ -0.27
ERCC1-207ENST00000588738 FGF8P55075 233 aaPredicted RBP13.36□□□□□ -0.27
ERCC1-207ENST00000588738 PRR9Q5T870 116 aa13.36□□□□□ -0.27
ERCC1-207ENST00000588738 EIF4E3Q8N5X7 224 aaKnown RBP13.36□□□□□ -0.27
ERCC1-207ENST00000588738 STOML3Q8TAV4 291 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms