RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 STX19Q8N4C7 294 aa2.5□□□□□ -2.01
TUBD1-208ENST00000588009 Q8NDZ9 215 aa2.5□□□□□ -2.01
TUBD1-208ENST00000588009 GPR146Q96CH1 333 aa2.5□□□□□ -2.01
TUBD1-208ENST00000588009 CHST6Q9GZX3 395 aa2.5□□□□□ -2.01
TUBD1-208ENST00000588009 SH3BGRL3Q9H299 93 aa2.5□□□□□ -2.01
TUBD1-208ENST00000588009 ANK2Q01484 3957 aa2.5□□□□□ -2.01
TUBD1-208ENST00000588009 MCM3APO60318 1980 aa2.5□□□□□ -2.01
TUBD1-208ENST00000588009 MYH7BA7E2Y1 1941 aa2.5□□□□□ -2.01
TUBD1-208ENST00000588009 MYH13Q9UKX3 1938 aa2.5□□□□□ -2.01
TUBD1-208ENST00000588009 PARP14Q460N5 1801 aa2.49□□□□□ -2.01
TUBD1-208ENST00000588009 MYH11P35749 1972 aa2.49□□□□□ -2.01
TUBD1-208ENST00000588009 ARRDC5A6NEK1 342 aa2.49□□□□□ -2.01
TUBD1-208ENST00000588009 CLDN25C9JDP6 229 aa2.49□□□□□ -2.01
TUBD1-208ENST00000588009 SLC22A1O15245 554 aa2.49□□□□□ -2.01
TUBD1-208ENST00000588009 SMIM17P0DL12 118 aa2.49□□□□□ -2.01
TUBD1-208ENST00000588009 RPS4Y1P22090 263 aaKnown RBP2.49□□□□□ -2.01
TUBD1-208ENST00000588009 PPIBP23284 216 aaKnown RBP2.49□□□□□ -2.01
TUBD1-208ENST00000588009 PEBP1P30086 187 aaKnown RBP2.49□□□□□ -2.01
TUBD1-208ENST00000588009 PHBP35232 272 aa2.49□□□□□ -2.01
TUBD1-208ENST00000588009 GLRXP35754 106 aa2.49□□□□□ -2.01
TUBD1-208ENST00000588009 TMEM258P61165 79 aa2.49□□□□□ -2.01
TUBD1-208ENST00000588009 AKR1C8PQ5T2L2 129 aa2.49□□□□□ -2.01
TUBD1-208ENST00000588009 Q6Q795 121 aa2.49□□□□□ -2.01
TUBD1-208ENST00000588009 Q6ZTI0 123 aa2.49□□□□□ -2.01
TUBD1-208ENST00000588009 LYRM2Q9NU23 88 aaPredicted RBP2.49□□□□□ -2.01
TUBD1-208ENST00000588009 SIPA1L3O60292 1781 aaPredicted RBP2.49□□□□□ -2.01
TUBD1-208ENST00000588009 G3V2T6 193 aa2.48□□□□□ -2.01
TUBD1-208ENST00000588009 TRAPPC2LH3BP13 241 aa2.48□□□□□ -2.01
TUBD1-208ENST00000588009 J3QQQ9 107 aa2.48□□□□□ -2.01
TUBD1-208ENST00000588009 CRHP06850 196 aa2.48□□□□□ -2.01
TUBD1-208ENST00000588009 IFI30P13284 250 aa2.48□□□□□ -2.01
TUBD1-208ENST00000588009 G6PCP35575 357 aa2.48□□□□□ -2.01
TUBD1-208ENST00000588009 ZNF80P51504 273 aaPredicted RBP2.48□□□□□ -2.01
TUBD1-208ENST00000588009 RPL26P61254 145 aaKnown RBP2.48□□□□□ -2.01
TUBD1-208ENST00000588009 SARNPP82979 210 aaKnown RBP2.48□□□□□ -2.01
TUBD1-208ENST00000588009 KISS1Q15726 138 aa2.48□□□□□ -2.01
TUBD1-208ENST00000588009 TPRXLQ17RH7 258 aa2.48□□□□□ -2.01
TUBD1-208ENST00000588009 FAM27BQ5VT28 67 aa2.48□□□□□ -2.01
TUBD1-208ENST00000588009 KTN1-AS1Q86SY8 53 aa2.48□□□□□ -2.01
TUBD1-208ENST00000588009 TXNDC17Q9BRA2 123 aa2.48□□□□□ -2.01
TUBD1-208ENST00000588009 TTTY12Q9BZ98 90 aa2.48□□□□□ -2.01
TUBD1-208ENST00000588009 RPL26L1Q9UNX3 145 aaKnown RBP2.48□□□□□ -2.01
TUBD1-208ENST00000588009 MYLKQ15746 1914 aa2.48□□□□□ -2.01
TUBD1-208ENST00000588009 DIDO1Q9BTC0 2240 aaKnown RBP2.48□□□□□ -2.01
TUBD1-208ENST00000588009 COL7A1Q02388 2944 aa2.47□□□□□ -2.01
TUBD1-208ENST00000588009 A0A1B0GVG6 124 aa2.47□□□□□ -2.01
TUBD1-208ENST00000588009 H3BRN7 92 aa2.47□□□□□ -2.01
TUBD1-208ENST00000588009 BUB1B-PAK6H3BSN5 160 aa2.47□□□□□ -2.01
TUBD1-208ENST00000588009 OR2J2O76002 312 aa2.47□□□□□ -2.01
TUBD1-208ENST00000588009 NFYAP23511 347 aaPredicted RBP2.47□□□□□ -2.01
TUBD1-208ENST00000588009 SRIP30626 198 aa2.47□□□□□ -2.01
TUBD1-208ENST00000588009 EIF2B2P49770 351 aaKnown RBP2.47□□□□□ -2.01
TUBD1-208ENST00000588009 SUPT4H1P63272 117 aaKnown RBP2.47□□□□□ -2.01
TUBD1-208ENST00000588009 OR13D1Q8NGV5 346 aa2.47□□□□□ -2.01
TUBD1-208ENST00000588009 OR10J5Q8NHC4 309 aa2.47□□□□□ -2.01
TUBD1-208ENST00000588009 ZCCHC13Q8WW36 166 aaKnown RBP2.47□□□□□ -2.01
TUBD1-208ENST00000588009 LYSMD1Q96S90 227 aa2.47□□□□□ -2.01
TUBD1-208ENST00000588009 TIMM21Q9BVV7 248 aa2.47□□□□□ -2.01
TUBD1-208ENST00000588009 BATF3Q9NR55 127 aa2.47□□□□□ -2.01
TUBD1-208ENST00000588009 ACER3Q9NUN7 267 aa2.47□□□□□ -2.01
TUBD1-208ENST00000588009 AMMECR1Q9Y4X0 333 aaPredicted RBP2.47□□□□□ -2.01
TUBD1-208ENST00000588009 PRKDCP78527 4128 aaKnown RBP2.47□□□□□ -2.01
TUBD1-208ENST00000588009 LAMA4Q16363 1823 aa2.47□□□□□ -2.01
TUBD1-208ENST00000588009 KIF20BQ96Q89 1820 aa2.47□□□□□ -2.01
TUBD1-208ENST00000588009 ZGRF1Q86YA3 2104 aa2.47□□□□□ -2.01
TUBD1-208ENST00000588009 DENND4CQ5VZ89 1909 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 IGLV3-9A0A075B6K5 115 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 TRBV19A0A075B6N1 114 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 A0A0D9SEW6 157 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 TRBV10-2A0A0K0K1G8 114 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 A0A1W2PRE2 83 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 PRORSD1PA6NEY8 169 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 H7C1C5 153 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 ORC5O43913 435 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 PIAS1O75925 651 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 IFNA14P01570 189 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 CSN2P05814 226 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 P0DMU3 169 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 FAM231AP0DMU4 169 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 FAM231CP0DMU5 169 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 CDC42P60953 191 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 LCN6P62502 163 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 DCUN1D2Q6PH85 259 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 OR52R1Q8NGF1 315 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 DOHHQ9BU89 302 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 TAS2R7Q9NYW3 318 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 TVP23BQ9NYZ1 205 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 STAB2Q8WWQ8 2551 aa2.46□□□□□ -2.02
TUBD1-208ENST00000588009 NUMA1Q14980 2115 aa2.45□□□□□ -2.02
TUBD1-208ENST00000588009 PCDH15Q96QU1 1955 aa2.45□□□□□ -2.02
TUBD1-208ENST00000588009 HELZP42694 1942 aaKnown RBP2.45□□□□□ -2.02
TUBD1-208ENST00000588009 MAP1LC3B2A6NCE7 125 aa2.45□□□□□ -2.02
TUBD1-208ENST00000588009 HMSDA8MTL9 139 aa2.45□□□□□ -2.02
TUBD1-208ENST00000588009 PGLYRP1O75594 196 aaPredicted RBP2.45□□□□□ -2.02
TUBD1-208ENST00000588009 PIGPP57054 158 aa2.45□□□□□ -2.02
TUBD1-208ENST00000588009 RHEBQ15382 184 aa2.45□□□□□ -2.02
TUBD1-208ENST00000588009 LRRC28Q86X40 367 aaPredicted RBP2.45□□□□□ -2.02
TUBD1-208ENST00000588009 BPIFA4PQ86YQ2 179 aa2.45□□□□□ -2.02
TUBD1-208ENST00000588009 ZNF439Q8NDP4 499 aa2.45□□□□□ -2.02
TUBD1-208ENST00000588009 TERB2Q8NHR7 220 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms