RNA–Protein interactions for RNA: ENST00000587135.1

HDAC5-205, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-205ENST00000587135 VGLL1Q99990 258 aa13.83□□□□□ -0.2
HDAC5-205ENST00000587135 IGKV2-40A0A087WW87 121 aaPredicted RBP13.82□□□□□ -0.2
HDAC5-205ENST00000587135 A0A1W2PPV4 95 aa13.82□□□□□ -0.2
HDAC5-205ENST00000587135 KLLNB2CW77 178 aa13.82□□□□□ -0.2
HDAC5-205ENST00000587135 IGKV2D-40P01614 121 aaPredicted RBP13.82□□□□□ -0.2
HDAC5-205ENST00000587135 HTN1P15515 57 aa13.82□□□□□ -0.2
HDAC5-205ENST00000587135 CRISP2P16562 243 aa13.82□□□□□ -0.2
HDAC5-205ENST00000587135 UBE2L3P68036 154 aaKnown RBP13.82□□□□□ -0.2
HDAC5-205ENST00000587135 SERF2P84101 59 aa13.82□□□□□ -0.2
HDAC5-205ENST00000587135 PQLC2Q6ZP29 291 aa13.82□□□□□ -0.2
HDAC5-205ENST00000587135 ZNF493Q6ZR52 646 aa13.82□□□□□ -0.2
HDAC5-205ENST00000587135 RNASE8Q8TDE3 154 aaKnown RBP13.82□□□□□ -0.2
HDAC5-205ENST00000587135 Q9H3A6 140 aa13.82□□□□□ -0.2
HDAC5-205ENST00000587135 FXYD6-FXYD2A0A087WZ82 144 aa13.81□□□□□ -0.2
HDAC5-205ENST00000587135 J3KRW8 73 aa13.81□□□□□ -0.2
HDAC5-205ENST00000587135 ZNF324O75467 553 aaPredicted RBP13.81□□□□□ -0.2
HDAC5-205ENST00000587135 SLC25A5P05141 298 aaKnown RBP13.81□□□□□ -0.2
HDAC5-205ENST00000587135 NMBP08949 121 aa13.81□□□□□ -0.2
HDAC5-205ENST00000587135 C16orf74Q96GX8 76 aa13.81□□□□□ -0.2
HDAC5-205ENST00000587135 ZNF492Q9P255 531 aa13.81□□□□□ -0.2
HDAC5-205ENST00000587135 TRAV12-3A0A0B4J271 114 aa13.8□□□□□ -0.2
HDAC5-205ENST00000587135 DAD1P61803 113 aa13.8□□□□□ -0.2
HDAC5-205ENST00000587135 RPL7L1Q6DKI1 246 aaKnown RBP13.8□□□□□ -0.2
HDAC5-205ENST00000587135 TMEM263Q8WUH6 116 aaKnown RBP13.8□□□□□ -0.2
HDAC5-205ENST00000587135 FAM210BQ96KR6 192 aa13.8□□□□□ -0.2
HDAC5-205ENST00000587135 SH3BGRL3Q9H299 93 aa13.8□□□□□ -0.2
HDAC5-205ENST00000587135 C7orf71A4D174 169 aa13.79□□□□□ -0.2
HDAC5-205ENST00000587135 RBAKDNA6NC62 111 aa13.79□□□□□ -0.2
HDAC5-205ENST00000587135 STAG3L2P0CL84 134 aa13.79□□□□□ -0.2
HDAC5-205ENST00000587135 STAG3L3P0CL85 134 aa13.79□□□□□ -0.2
HDAC5-205ENST00000587135 CD300CQ08708 224 aa13.79□□□□□ -0.2
HDAC5-205ENST00000587135 ZFAND2AQ8N6M9 145 aa13.79□□□□□ -0.2
HDAC5-205ENST00000587135 SUN5Q8TC36 379 aa13.79□□□□□ -0.2
HDAC5-205ENST00000587135 PYGO2Q9BRQ0 406 aa13.79□□□□□ -0.2
HDAC5-205ENST00000587135 TIMM8BQ9Y5J9 83 aaPredicted RBP13.79□□□□□ -0.2
HDAC5-205ENST00000587135 TRBV7-9A0A0J9YWB2 115 aa13.78□□□□□ -0.2
HDAC5-205ENST00000587135 DIRC3C9JPN6 131 aa13.78□□□□□ -0.2
HDAC5-205ENST00000587135 HMGB3O15347 200 aaKnown RBP13.78□□□□□ -0.2
HDAC5-205ENST00000587135 MBP02144 154 aa13.78□□□□□ -0.2
HDAC5-205ENST00000587135 CSN1S1P47710 185 aa13.78□□□□□ -0.2
HDAC5-205ENST00000587135 TMEM78Q5T7P6 136 aa13.78□□□□□ -0.2
HDAC5-205ENST00000587135 RXFP4Q8TDU9 374 aa13.78□□□□□ -0.2
HDAC5-205ENST00000587135 RAB24Q969Q5 203 aa13.78□□□□□ -0.2
HDAC5-205ENST00000587135 GNPNAT1Q96EK6 184 aaPredicted RBP13.78□□□□□ -0.2
HDAC5-205ENST00000587135 LINC00467Q9BRT7 94 aa13.78□□□□□ -0.2
HDAC5-205ENST00000587135 OTORQ9NRC9 128 aa13.78□□□□□ -0.2
HDAC5-205ENST00000587135 PGPA6NDG6 321 aa13.77□□□□□ -0.21
HDAC5-205ENST00000587135 CDC34P49427 236 aaPredicted RBP13.77□□□□□ -0.21
HDAC5-205ENST00000587135 ZNF138P52744 262 aa13.77□□□□□ -0.21
HDAC5-205ENST00000587135 BTN1A1Q13410 526 aa13.77□□□□□ -0.21
HDAC5-205ENST00000587135 CCDC28AQ8IWP9 274 aa13.77□□□□□ -0.21
HDAC5-205ENST00000587135 ARL6IP6Q8N6S5 226 aa13.77□□□□□ -0.21
HDAC5-205ENST00000587135 NDUFAF3Q9BU61 184 aa13.77□□□□□ -0.21
HDAC5-205ENST00000587135 CYTL1Q9NRR1 136 aa13.77□□□□□ -0.21
HDAC5-205ENST00000587135 EPPK1P58107 5090 aaKnown RBP13.76□□□□□ -0.21
HDAC5-205ENST00000587135 BORCS7-ASMTA0A0B4J1R7 106 aa13.76□□□□□ -0.21
HDAC5-205ENST00000587135 GPX1P07203 203 aa13.76□□□□□ -0.21
HDAC5-205ENST00000587135 DEFB130BP0DP73 79 aa13.76□□□□□ -0.21
HDAC5-205ENST00000587135 DEFB130AP0DP74 79 aa13.76□□□□□ -0.21
HDAC5-205ENST00000587135 RNASE4P34096 147 aaKnown RBP13.76□□□□□ -0.21
HDAC5-205ENST00000587135 PRR9Q5T870 116 aa13.76□□□□□ -0.21
HDAC5-205ENST00000587135 NOP10Q9NPE3 64 aaKnown RBP13.76□□□□□ -0.21
HDAC5-205ENST00000587135 CBY3A6NI87 242 aa13.75□□□□□ -0.21
HDAC5-205ENST00000587135 SMLR1H3BR10 107 aa13.75□□□□□ -0.21
HDAC5-205ENST00000587135 TAAR5O14804 337 aa13.75□□□□□ -0.21
HDAC5-205ENST00000587135 ARL14EPLP0DKL9 152 aa13.75□□□□□ -0.21
HDAC5-205ENST00000587135 LINC00612Q8N6U2 182 aa13.75□□□□□ -0.21
HDAC5-205ENST00000587135 ARPC5O15511 151 aa13.74□□□□□ -0.21
HDAC5-205ENST00000587135 HTN3P15516 51 aa13.74□□□□□ -0.21
HDAC5-205ENST00000587135 Q6ZQT7 251 aa13.74□□□□□ -0.21
HDAC5-205ENST00000587135 Q8TAT8 98 aa13.74□□□□□ -0.21
HDAC5-205ENST00000587135 TMED6Q8WW62 240 aa13.74□□□□□ -0.21
HDAC5-205ENST00000587135 HYLS1Q96M11 299 aa13.74□□□□□ -0.21
HDAC5-205ENST00000587135 GCHFRP30047 84 aa13.73□□□□□ -0.21
HDAC5-205ENST00000587135 ANXA2RQ3ZCQ2 193 aa13.73□□□□□ -0.21
HDAC5-205ENST00000587135 FAM74A1Q5RGS3 127 aa13.73□□□□□ -0.21
HDAC5-205ENST00000587135 SSX7Q7RTT5 188 aa13.73□□□□□ -0.21
HDAC5-205ENST00000587135 C11orf72Q8NBR9 251 aa13.73□□□□□ -0.21
HDAC5-205ENST00000587135 OR11H4Q8NGC9 324 aa13.73□□□□□ -0.21
HDAC5-205ENST00000587135 ACTR3CQ9C0K3 210 aaPredicted RBP13.73□□□□□ -0.21
HDAC5-205ENST00000587135 LENEPQ9Y5L5 61 aa13.73□□□□□ -0.21
HDAC5-205ENST00000587135 DAZ2Q13117 558 aaKnown RBP13.72□□□□□ -0.21
HDAC5-205ENST00000587135 TMEM88Q6PEY1 159 aa13.72□□□□□ -0.21
HDAC5-205ENST00000587135 CMTM2Q8TAZ6 248 aa13.72□□□□□ -0.21
HDAC5-205ENST00000587135 HMSDA8MTL9 139 aa13.71□□□□□ -0.21
HDAC5-205ENST00000587135 CXorf1O96002 111 aa13.71□□□□□ -0.21
HDAC5-205ENST00000587135 ZNF726P1Q15940 193 aa13.71□□□□□ -0.21
HDAC5-205ENST00000587135 EIF4E3Q8N5X7 224 aaKnown RBP13.71□□□□□ -0.21
HDAC5-205ENST00000587135 ST6GAL2Q96JF0 529 aa13.71□□□□□ -0.21
HDAC5-205ENST00000587135 DNAH6Q9C0G6 4158 aa13.71□□□□□ -0.21
HDAC5-205ENST00000587135 ATP5G1P05496 136 aa13.7□□□□□ -0.22
HDAC5-205ENST00000587135 P0DMU3 169 aa13.7□□□□□ -0.22
HDAC5-205ENST00000587135 FAM231AP0DMU4 169 aa13.7□□□□□ -0.22
HDAC5-205ENST00000587135 FAM231CP0DMU5 169 aa13.7□□□□□ -0.22
HDAC5-205ENST00000587135 ATP5G3P48201 142 aa13.7□□□□□ -0.22
HDAC5-205ENST00000587135 ZNF345Q14585 488 aa13.7□□□□□ -0.22
HDAC5-205ENST00000587135 KCNRGQ8N5I3 272 aa13.7□□□□□ -0.22
HDAC5-205ENST00000587135 ZNF680Q8NEM1 530 aa13.7□□□□□ -0.22
HDAC5-205ENST00000587135 GSN-AS1Q9NRJ2 163 aa13.7□□□□□ -0.22
HDAC5-205ENST00000587135 TMEM167BQ9NRX6 74 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms