RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 ZNF705FA8MVS1 300 aaPredicted RBP11.87□□□□□ -0.51
ATG4D-205ENST00000586477 H3BMM0 161 aa11.87□□□□□ -0.51
ATG4D-205ENST00000586477 S100A9P06702 114 aaKnown RBP11.87□□□□□ -0.51
ATG4D-205ENST00000586477 APOC4P55056 127 aa11.87□□□□□ -0.51
ATG4D-205ENST00000586477 CCDC28AQ8IWP9 274 aa11.87□□□□□ -0.51
ATG4D-205ENST00000586477 MUC7Q8TAX7 377 aa11.87□□□□□ -0.51
ATG4D-205ENST00000586477 FAM210AQ96ND0 272 aa11.87□□□□□ -0.51
ATG4D-205ENST00000586477 ODF3Q96PU9 254 aa11.87□□□□□ -0.51
ATG4D-205ENST00000586477 EIF5A2Q9GZV4 153 aaKnown RBP11.87□□□□□ -0.51
ATG4D-205ENST00000586477 RPH3ALQ9UNE2 315 aa11.87□□□□□ -0.51
ATG4D-205ENST00000586477 TRBV7-9A0A0J9YWB2 115 aa11.86□□□□□ -0.51
ATG4D-205ENST00000586477 LOC102723971A0A1B0GUV8 181 aa11.86□□□□□ -0.51
ATG4D-205ENST00000586477 RBMY1BA6NDE4 496 aaKnown RBP11.86□□□□□ -0.51
ATG4D-205ENST00000586477 RBMY1EA6NEQ0 496 aaKnown RBP11.86□□□□□ -0.51
ATG4D-205ENST00000586477 KNCNA6PVL3 124 aa11.86□□□□□ -0.51
ATG4D-205ENST00000586477 NPIPB6E9PJ23 425 aa11.86□□□□□ -0.51
ATG4D-205ENST00000586477 PEX7O00628 323 aa11.86□□□□□ -0.51
ATG4D-205ENST00000586477 AMBPP02760 352 aa11.86□□□□□ -0.51
ATG4D-205ENST00000586477 RBMY1DP0C7P1 496 aaKnown RBP11.86□□□□□ -0.51
ATG4D-205ENST00000586477 TSPOP30536 169 aa11.86□□□□□ -0.51
ATG4D-205ENST00000586477 CNN1P51911 297 aaKnown RBP11.86□□□□□ -0.51
ATG4D-205ENST00000586477 ZNF506Q5JVG8 444 aa11.86□□□□□ -0.51
ATG4D-205ENST00000586477 C9orf47Q6ZRZ4 202 aa11.86□□□□□ -0.51
ATG4D-205ENST00000586477 TRPT1Q86TN4 253 aaKnown RBP11.86□□□□□ -0.51
ATG4D-205ENST00000586477 OR4B1Q8NGF8 309 aa11.86□□□□□ -0.51
ATG4D-205ENST00000586477 NDFIP1Q9BT67 221 aa11.86□□□□□ -0.51
ATG4D-205ENST00000586477 C1QTNF4Q9BXJ3 329 aa11.86□□□□□ -0.51
ATG4D-205ENST00000586477 LENEPQ9Y5L5 61 aa11.86□□□□□ -0.51
ATG4D-205ENST00000586477 KIR2DL5BA0A0G2JN68 375 aa11.85□□□□□ -0.51
ATG4D-205ENST00000586477 KIR2DL5BA0A0G2JPC4 375 aa11.85□□□□□ -0.51
ATG4D-205ENST00000586477 ATP5G3P48201 142 aa11.85□□□□□ -0.51
ATG4D-205ENST00000586477 PEA15Q15121 130 aa11.85□□□□□ -0.51
ATG4D-205ENST00000586477 GOLT1AQ6ZVE7 132 aa11.85□□□□□ -0.51
ATG4D-205ENST00000586477 KIR2DL5AQ8N109 375 aa11.85□□□□□ -0.51
ATG4D-205ENST00000586477 TMEM75Q8N9X5 138 aa11.85□□□□□ -0.51
ATG4D-205ENST00000586477 KIR2DL5BQ8NHK3 375 aa11.85□□□□□ -0.51
ATG4D-205ENST00000586477 A8MTW9 85 aa11.84□□□□□ -0.51
ATG4D-205ENST00000586477 F6UB75 175 aa11.84□□□□□ -0.51
ATG4D-205ENST00000586477 UBE2CO00762 179 aa11.84□□□□□ -0.51
ATG4D-205ENST00000586477 AKR1C3P42330 323 aa11.84□□□□□ -0.51
ATG4D-205ENST00000586477 UBE2G1P62253 170 aa11.84□□□□□ -0.51
ATG4D-205ENST00000586477 TOR2AQ5JU69 321 aa11.84□□□□□ -0.51
ATG4D-205ENST00000586477 PCNPQ8WW12 178 aaKnown RBP11.84□□□□□ -0.51
ATG4D-205ENST00000586477 FMC1Q96HJ9 113 aa11.84□□□□□ -0.51
ATG4D-205ENST00000586477 EDA2RQ9HAV5 297 aa11.84□□□□□ -0.51
ATG4D-205ENST00000586477 RETNQ9HD89 108 aa11.84□□□□□ -0.51
ATG4D-205ENST00000586477 PLECQ15149 4684 aaKnown RBP11.84□□□□□ -0.51
ATG4D-205ENST00000586477 TENM2Q9NT68 2774 aa11.83□□□□□ -0.52
ATG4D-205ENST00000586477 IGKV2-40A0A087WW87 121 aaPredicted RBP11.83□□□□□ -0.52
ATG4D-205ENST00000586477 PRAC2D3DTV9 90 aa11.83□□□□□ -0.52
ATG4D-205ENST00000586477 TMEM250H0YL14 139 aa11.83□□□□□ -0.52
ATG4D-205ENST00000586477 IGKV2D-40P01614 121 aaPredicted RBP11.83□□□□□ -0.52
ATG4D-205ENST00000586477 LEPP41159 167 aa11.83□□□□□ -0.52
ATG4D-205ENST00000586477 ZNF138P52744 262 aa11.83□□□□□ -0.52
ATG4D-205ENST00000586477 GNG5P63218 68 aa11.83□□□□□ -0.52
ATG4D-205ENST00000586477 ZNF124Q15973 351 aa11.83□□□□□ -0.52
ATG4D-205ENST00000586477 SAPCD1Q5SSQ6 148 aa11.83□□□□□ -0.52
ATG4D-205ENST00000586477 CASC10Q5T4H9 136 aa11.83□□□□□ -0.52
ATG4D-205ENST00000586477 GDF5OSQ5U4N7 250 aa11.83□□□□□ -0.52
ATG4D-205ENST00000586477 C11orf52Q96A22 123 aa11.83□□□□□ -0.52
ATG4D-205ENST00000586477 CITED4Q96RK1 184 aa11.83□□□□□ -0.52
ATG4D-205ENST00000586477 RAB19A4D1S5 217 aa11.82□□□□□ -0.52
ATG4D-205ENST00000586477 CSTL1Q9H114 145 aa11.82□□□□□ -0.52
ATG4D-205ENST00000586477 MED9Q9NWA0 146 aa11.82□□□□□ -0.52
ATG4D-205ENST00000586477 ZNF492Q9P255 531 aa11.82□□□□□ -0.52
ATG4D-205ENST00000586477 TRBV6-1A0A0K0K1D8 114 aa11.81□□□□□ -0.52
ATG4D-205ENST00000586477 SCO2A0A1W2PP80 73 aa11.81□□□□□ -0.52
ATG4D-205ENST00000586477 RPL35AP18077 110 aaKnown RBP11.81□□□□□ -0.52
ATG4D-205ENST00000586477 FLI1Q01543 452 aaPredicted RBP11.81□□□□□ -0.52
ATG4D-205ENST00000586477 TMEM183BQ1AE95 376 aa11.81□□□□□ -0.52
ATG4D-205ENST00000586477 SPATA25Q9BR10 227 aa11.81□□□□□ -0.52
ATG4D-205ENST00000586477 AGPAT4-IT1Q9H0P7 198 aa11.81□□□□□ -0.52
ATG4D-205ENST00000586477 ZFP30Q9Y2G7 519 aa11.81□□□□□ -0.52
ATG4D-205ENST00000586477 KLF12Q9Y4X4 402 aa11.81□□□□□ -0.52
ATG4D-205ENST00000586477 IGKV3-20P01619 116 aa11.8□□□□□ -0.52
ATG4D-205ENST00000586477 ZNF705DP0CH99 300 aaPredicted RBP11.8□□□□□ -0.52
ATG4D-205ENST00000586477 ZNF705BP0CI00 300 aaPredicted RBP11.8□□□□□ -0.52
ATG4D-205ENST00000586477 CDKN1BP46527 198 aa11.8□□□□□ -0.52
ATG4D-205ENST00000586477 TAS2R60P59551 318 aa11.8□□□□□ -0.52
ATG4D-205ENST00000586477 DEFB1P60022 68 aa11.8□□□□□ -0.52
ATG4D-205ENST00000586477 RARRES2Q99969 163 aa11.8□□□□□ -0.52
ATG4D-205ENST00000586477 VGLL1Q99990 258 aa11.8□□□□□ -0.52
ATG4D-205ENST00000586477 PSG8Q9UQ74 426 aa11.8□□□□□ -0.52
ATG4D-205ENST00000586477 DNAH1Q9P2D7 4330 aa11.79□□□□□ -0.52
ATG4D-205ENST00000586477 CRISP2P16562 243 aa11.79□□□□□ -0.52
ATG4D-205ENST00000586477 ERCC8Q13216 396 aa11.79□□□□□ -0.52
ATG4D-205ENST00000586477 AMTNQ6UX39 209 aa11.79□□□□□ -0.52
ATG4D-205ENST00000586477 C2CD4CQ8TF44 421 aa11.79□□□□□ -0.52
ATG4D-205ENST00000586477 SMIM12Q96EX1 92 aa11.79□□□□□ -0.52
ATG4D-205ENST00000586477 C20orf144Q9BQM9 153 aa11.79□□□□□ -0.52
ATG4D-205ENST00000586477 CA1P00915 261 aaPredicted RBP11.78□□□□□ -0.52
ATG4D-205ENST00000586477 CT45A10P0DMU9 189 aa11.78□□□□□ -0.52
ATG4D-205ENST00000586477 UQCC3Q6UW78 93 aa11.78□□□□□ -0.52
ATG4D-205ENST00000586477 PRNTQ86SH4 94 aa11.78□□□□□ -0.52
ATG4D-205ENST00000586477 Q86TA4 180 aa11.78□□□□□ -0.52
ATG4D-205ENST00000586477 TRAV8-1A0A0A6YYK1 113 aa11.77□□□□□ -0.53
ATG4D-205ENST00000586477 INSP01308 110 aa11.77□□□□□ -0.53
ATG4D-205ENST00000586477 GPX1P07203 203 aa11.77□□□□□ -0.53
ATG4D-205ENST00000586477 RPL35P42766 123 aaKnown RBP11.77□□□□□ -0.53
ATG4D-205ENST00000586477 Q6ZWC4 215 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms