RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 RETNQ9HD89 108 aa5.85□□□□□ -1.47
SMAD4-204ENST00000586253 NBEAL2Q6ZNJ1 2754 aa5.85□□□□□ -1.47
SMAD4-204ENST00000586253 CTXND1A0A1B0GTU2 59 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 ZNF705FA8MVS1 300 aaPredicted RBP5.84□□□□□ -1.47
SMAD4-204ENST00000586253 UMAD1C9J7I0 102 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 CXorf1O96002 111 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 AMBPP02760 352 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 ARL14EPLP0DKL9 152 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 HIST1H1AQ02539 215 aaPredicted RBP5.84□□□□□ -1.47
SMAD4-204ENST00000586253 ZFP69Q49AA0 526 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 GAGE13Q4V321 117 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 EIF5AL1Q6IS14 154 aaKnown RBP5.84□□□□□ -1.47
SMAD4-204ENST00000586253 AMTNQ6UX39 209 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 DPPA3Q6W0C5 159 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 BAP18Q8IXM2 172 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 EXOC3-AS1Q8N2X6 119 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 CSNK1G2-AS1Q8NCQ2 148 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 OR10J6PQ8NGY7 276 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 SUN5Q8TC36 379 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 PHYHIPLQ96FC7 376 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 WWC2-AS2Q96NR7 200 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 ODF3Q96PU9 254 aa5.84□□□□□ -1.47
SMAD4-204ENST00000586253 ZNF705EA8MWA4 302 aaPredicted RBP5.83□□□□□ -1.48
SMAD4-204ENST00000586253 PRAC2D3DTV9 90 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 BOLA2-SMG1P6H3BVE0 249 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 M0R3E3 92 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 IGKV3-20P01619 116 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 GCHFRP30047 84 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 CSN1S1P47710 185 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 RANP62826 216 aaKnown RBP5.83□□□□□ -1.48
SMAD4-204ENST00000586253 CD300CQ08708 224 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 ICAM4Q14773 271 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 FAM74A1Q5RGS3 127 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 SLC51BQ86UW2 128 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 C9orf62Q8N4C0 152 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 ARL6IP6Q8N6S5 226 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 RXFP4Q8TDU9 374 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 LINC00477Q96M19 166 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 RARRES2Q99969 163 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 SLC35B3Q9H1N7 401 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 Q9H3A6 140 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 EDA2RQ9HAV5 297 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 OTORQ9NRC9 128 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 TMEM167BQ9NRX6 74 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 XCL2Q9UBD3 114 aa5.83□□□□□ -1.48
SMAD4-204ENST00000586253 RBAKDNA6NC62 111 aa5.82□□□□□ -1.48
SMAD4-204ENST00000586253 HMGB3O15347 200 aaKnown RBP5.82□□□□□ -1.48
SMAD4-204ENST00000586253 EIF3GO75821 320 aaKnown RBP eCLIP5.82□□□□□ -1.48
SMAD4-204ENST00000586253 SLC25A5P05141 298 aaKnown RBP5.82□□□□□ -1.48
SMAD4-204ENST00000586253 ZNF705DP0CH99 300 aaPredicted RBP5.82□□□□□ -1.48
SMAD4-204ENST00000586253 ZNF705BP0CI00 300 aaPredicted RBP5.82□□□□□ -1.48
SMAD4-204ENST00000586253 MIFP14174 115 aa5.82□□□□□ -1.48
SMAD4-204ENST00000586253 TSPOP30536 169 aa5.82□□□□□ -1.48
SMAD4-204ENST00000586253 CDKN1BP46527 198 aa5.82□□□□□ -1.48
SMAD4-204ENST00000586253 RAB5CP51148 216 aa5.82□□□□□ -1.48
SMAD4-204ENST00000586253 ZNF726P1Q15940 193 aa5.82□□□□□ -1.48
SMAD4-204ENST00000586253 ZNF705AQ6ZN79 300 aaPredicted RBP5.82□□□□□ -1.48
SMAD4-204ENST00000586253 C9orf47Q6ZRZ4 202 aa5.82□□□□□ -1.48
SMAD4-204ENST00000586253 SSX7Q7RTT5 188 aa5.82□□□□□ -1.48
SMAD4-204ENST00000586253 OR11H2Q8NH07 326 aa5.82□□□□□ -1.48
SMAD4-204ENST00000586253 IGF2BP2-AS1Q96M15 143 aa5.82□□□□□ -1.48
SMAD4-204ENST00000586253 NEU1Q99519 415 aa5.82□□□□□ -1.48
SMAD4-204ENST00000586253 C11orf68Q9H3H3 251 aaKnown RBP5.82□□□□□ -1.48
SMAD4-204ENST00000586253 PPP1R14DQ9NXH3 145 aa5.82□□□□□ -1.48
SMAD4-204ENST00000586253 DNAH7Q8WXX0 4024 aa5.81□□□□□ -1.48
SMAD4-204ENST00000586253 TRBV7-9A0A0J9YWB2 115 aa5.81□□□□□ -1.48
SMAD4-204ENST00000586253 A0A1W2PRE2 83 aa5.81□□□□□ -1.48
SMAD4-204ENST00000586253 MAP1LC3B2A6NCE7 125 aa5.81□□□□□ -1.48
SMAD4-204ENST00000586253 SMIM9A6NGZ8 99 aa5.81□□□□□ -1.48
SMAD4-204ENST00000586253 PRSS29PA6NIE9 313 aa5.81□□□□□ -1.48
SMAD4-204ENST00000586253 INSP01308 110 aa5.81□□□□□ -1.48
SMAD4-204ENST00000586253 FXYD7P58549 80 aa5.81□□□□□ -1.48
SMAD4-204ENST00000586253 SPINK13Q1W4C9 94 aa5.81□□□□□ -1.48
SMAD4-204ENST00000586253 CMTM2Q8TAZ6 248 aa5.81□□□□□ -1.48
SMAD4-204ENST00000586253 TMED6Q8WW62 240 aa5.81□□□□□ -1.48
SMAD4-204ENST00000586253 C20orf144Q9BQM9 153 aa5.81□□□□□ -1.48
SMAD4-204ENST00000586253 MAP1LC3BQ9GZQ8 125 aa5.81□□□□□ -1.48
SMAD4-204ENST00000586253 GOLT1BQ9Y3E0 138 aa5.81□□□□□ -1.48
SMAD4-204ENST00000586253 IGKV2-40A0A087WW87 121 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-204ENST00000586253 SERTM2A0A1B0GWG4 89 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 PGPA6NDG6 321 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 DIRC3C9JPN6 131 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 M0R2Z0 102 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 CRXO43186 299 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-204ENST00000586253 IGKV2D-40P01614 121 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-204ENST00000586253 NMBP08949 121 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 CT45A10P0DMU9 189 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 LEPP41159 167 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 FHITP49789 147 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 TMEM78Q5T7P6 136 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 TMEM256Q8N2U0 113 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 Q8NAQ8 132 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 C5orf17Q8NAS9 161 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 IL17DQ8TAD2 202 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 FAM213BQ8TBF2 198 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 MBD3L1Q8WWY6 194 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 FAM19A4Q96LR4 140 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 NKX6-2Q9C056 277 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-204ENST00000586253 AGPAT4-IT1Q9H0P7 198 aa5.8□□□□□ -1.48
SMAD4-204ENST00000586253 ARL2-SNX15V9GYD0 113 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms