RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 TEX36Q5VZQ5 186 aa7.91□□□□□ -1.14
ZNF540-203ENST00000586134 FOXL2NBQ6ZUU3 175 aa7.91□□□□□ -1.14
ZNF540-203ENST00000586134 GGNQ86UU5 652 aa7.91□□□□□ -1.14
ZNF540-203ENST00000586134 PDPNQ86YL7 162 aa7.91□□□□□ -1.14
ZNF540-203ENST00000586134 BORCS8Q96FH0 119 aa7.91□□□□□ -1.14
ZNF540-203ENST00000586134 TMED7-TICAM2A0A0A6YYA0 188 aa7.9□□□□□ -1.14
ZNF540-203ENST00000586134 MS4A18H0YCH9 400 aa7.9□□□□□ -1.14
ZNF540-203ENST00000586134 HAX1O00165 279 aa7.9□□□□□ -1.14
ZNF540-203ENST00000586134 SPRY1O43609 319 aaPredicted RBP7.9□□□□□ -1.14
ZNF540-203ENST00000586134 NPYP01303 97 aa7.9□□□□□ -1.14
ZNF540-203ENST00000586134 FOXF2Q12947 444 aa7.9□□□□□ -1.14
ZNF540-203ENST00000586134 DUX4L9Q6RFH8 374 aaPredicted RBP7.9□□□□□ -1.14
ZNF540-203ENST00000586134 Q6ZQT7 251 aa7.9□□□□□ -1.14
ZNF540-203ENST00000586134 FAM214BQ7L5A3 538 aa7.9□□□□□ -1.14
ZNF540-203ENST00000586134 MYOZ3Q8TDC0 251 aa7.9□□□□□ -1.14
ZNF540-203ENST00000586134 IFI27L1Q96BM0 104 aa7.9□□□□□ -1.14
ZNF540-203ENST00000586134 MGST2Q99735 147 aa7.9□□□□□ -1.14
ZNF540-203ENST00000586134 PRNDQ9UKY0 176 aa7.9□□□□□ -1.14
ZNF540-203ENST00000586134 AKAP6Q13023 2319 aa7.9□□□□□ -1.14
ZNF540-203ENST00000586134 ITPR3Q14573 2671 aa7.9□□□□□ -1.15
ZNF540-203ENST00000586134 MIC13Q5XKP0 118 aa7.9□□□□□ -1.15
ZNF540-203ENST00000586134 NPIPB3Q92617 1050 aa7.9□□□□□ -1.15
ZNF540-203ENST00000586134 ODF3Q96PU9 254 aa7.9□□□□□ -1.15
ZNF540-203ENST00000586134 HIST1H4GQ99525 98 aa7.9□□□□□ -1.15
ZNF540-203ENST00000586134 RPP21Q9H633 154 aaKnown RBP7.9□□□□□ -1.15
ZNF540-203ENST00000586134 PLEKHA3Q9HB20 300 aa7.9□□□□□ -1.15
ZNF540-203ENST00000586134 RAI1Q7Z5J4 1906 aaPredicted RBP7.89□□□□□ -1.15
ZNF540-203ENST00000586134 TRBV7-3A0A075B6L6 115 aa7.89□□□□□ -1.15
ZNF540-203ENST00000586134 TRAV8-4A0A0B4J246 113 aa7.89□□□□□ -1.15
ZNF540-203ENST00000586134 IGKV1-6A0A0C4DH72 117 aa7.89□□□□□ -1.15
ZNF540-203ENST00000586134 TINCRA0A1B0GVN0 87 aa7.89□□□□□ -1.15
ZNF540-203ENST00000586134 SS18L1O75177 396 aaPredicted RBP7.89□□□□□ -1.15
ZNF540-203ENST00000586134 HBDP02042 147 aa7.89□□□□□ -1.15
ZNF540-203ENST00000586134 ZNF138P52744 262 aa7.89□□□□□ -1.15
ZNF540-203ENST00000586134 TRPT1Q86TN4 253 aaKnown RBP7.89□□□□□ -1.15
ZNF540-203ENST00000586134 RNF125Q96EQ8 232 aa7.89□□□□□ -1.15
ZNF540-203ENST00000586134 CHCHD5Q9BSY4 110 aa7.89□□□□□ -1.15
ZNF540-203ENST00000586134 PRRG4Q9BZD6 226 aa7.89□□□□□ -1.15
ZNF540-203ENST00000586134 TRAV2A0A0B4J234 112 aa7.88□□□□□ -1.15
ZNF540-203ENST00000586134 OOSP1A8MZH6 123 aa7.88□□□□□ -1.15
ZNF540-203ENST00000586134 H3BML4 177 aa7.88□□□□□ -1.15
ZNF540-203ENST00000586134 CNTFRP26992 372 aa7.88□□□□□ -1.15
ZNF540-203ENST00000586134 HSPE1P61604 102 aaKnown RBP7.88□□□□□ -1.15
ZNF540-203ENST00000586134 WDR31Q8NA23 367 aa7.88□□□□□ -1.15
ZNF540-203ENST00000586134 TMEM190Q8WZ59 177 aa7.88□□□□□ -1.15
ZNF540-203ENST00000586134 C7orf69Q9H7B7 122 aa7.88□□□□□ -1.15
ZNF540-203ENST00000586134 LSM4Q9Y4Z0 139 aaKnown RBP7.88□□□□□ -1.15
ZNF540-203ENST00000586134 TIMM8BQ9Y5J9 83 aaPredicted RBP7.88□□□□□ -1.15
ZNF540-203ENST00000586134 CSMD2Q7Z408 3487 aa7.88□□□□□ -1.15
ZNF540-203ENST00000586134 CELSR1Q9NYQ6 3014 aa7.88□□□□□ -1.15
ZNF540-203ENST00000586134 A0A096LNJ9 63 aa7.88□□□□□ -1.15
ZNF540-203ENST00000586134 IGKV1-12A0A0C4DH73 117 aa7.88□□□□□ -1.15
ZNF540-203ENST00000586134 IGKV1D-12P01611 117 aa7.88□□□□□ -1.15
ZNF540-203ENST00000586134 FKBP2P26885 142 aaKnown RBP7.88□□□□□ -1.15
ZNF540-203ENST00000586134 RPL13AP40429 203 aaKnown RBP7.88□□□□□ -1.15
ZNF540-203ENST00000586134 ZNF524Q96C55 264 aa7.88□□□□□ -1.15
ZNF540-203ENST00000586134 ZNF492Q9P255 531 aa7.88□□□□□ -1.15
ZNF540-203ENST00000586134 V9GYY9 64 aa7.88□□□□□ -1.15
ZNF540-203ENST00000586134 IGKV1-27A0A075B6S5 117 aa7.87□□□□□ -1.15
ZNF540-203ENST00000586134 FAM240AA0A1B0GVK7 77 aa7.87□□□□□ -1.15
ZNF540-203ENST00000586134 ATP5LO75964 103 aa7.87□□□□□ -1.15
ZNF540-203ENST00000586134 ACTL6BO94805 426 aa7.87□□□□□ -1.15
ZNF540-203ENST00000586134 CRYGAP11844 174 aa7.87□□□□□ -1.15
ZNF540-203ENST00000586134 CRYGSP22914 178 aa7.87□□□□□ -1.15
ZNF540-203ENST00000586134 GAGE2AQ6NT46 116 aa7.87□□□□□ -1.15
ZNF540-203ENST00000586134 SIGLEC15Q6ZMC9 328 aa7.87□□□□□ -1.15
ZNF540-203ENST00000586134 RFESDQ8TAC1 157 aa7.87□□□□□ -1.15
ZNF540-203ENST00000586134 IGFBPL1Q8WX77 278 aa7.87□□□□□ -1.15
ZNF540-203ENST00000586134 TIMD4Q96H15 378 aa7.87□□□□□ -1.15
ZNF540-203ENST00000586134 PRSS22Q9GZN4 317 aa7.87□□□□□ -1.15
ZNF540-203ENST00000586134 EPDR1Q9UM22 224 aa7.87□□□□□ -1.15
ZNF540-203ENST00000586134 HHLA3Q9XRX5 114 aa7.87□□□□□ -1.15
ZNF540-203ENST00000586134 IGKV2D-26A0A0A0MRZ7 120 aa7.86□□□□□ -1.15
ZNF540-203ENST00000586134 TRAV8-1A0A0A6YYK1 113 aa7.86□□□□□ -1.15
ZNF540-203ENST00000586134 TMEM258P61165 79 aa7.86□□□□□ -1.15
ZNF540-203ENST00000586134 MBNL2Q5VZF2 373 aaKnown RBP7.86□□□□□ -1.15
ZNF540-203ENST00000586134 LINC01560Q8TB33 94 aa7.86□□□□□ -1.15
ZNF540-203ENST00000586134 ZNF488Q96MN9 340 aa7.86□□□□□ -1.15
ZNF540-203ENST00000586134 TRGV9Q99603 122 aa7.86□□□□□ -1.15
ZNF540-203ENST00000586134 BEX4Q9NWD9 120 aaPredicted RBP7.86□□□□□ -1.15
ZNF540-203ENST00000586134 A0A0J9YW62 118 aa7.86□□□□□ -1.15
ZNF540-203ENST00000586134 IGLV2-14P01704 120 aa7.86□□□□□ -1.15
ZNF540-203ENST00000586134 C3orf56Q8N813 242 aa7.86□□□□□ -1.15
ZNF540-203ENST00000586134 CNEP1R1Q8N9A8 125 aa7.86□□□□□ -1.15
ZNF540-203ENST00000586134 C2CD3Q4AC94 2353 aa7.86□□□□□ -1.15
ZNF540-203ENST00000586134 FREM1Q5H8C1 2179 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 LOC107984156A0A0G2JMH3 177 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 CXCL13O43927 109 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 IGKCP01834 107 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 LGALS1P09382 135 aaKnown RBP7.85□□□□□ -1.15
ZNF540-203ENST00000586134 CD7P09564 240 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 PRR20EP86478 221 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 PRR20CP86479 221 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 PRR20DP86480 221 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 PRR20BP86481 221 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 PRR20AP86496 221 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 KRTAP21-3Q3LHN1 58 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 ZNF493Q6ZR52 646 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 ARL17AQ8IVW1 177 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 GJC3Q8NFK1 279 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms