RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SAMD5Q5TGI4 173 aa9.5□□□□□ -0.89
VMP1-202ENST00000585847 LCN12Q6JVE5 192 aa9.5□□□□□ -0.89
VMP1-202ENST00000585847 RBPMS2Q6ZRY4 209 aaKnown RBP9.5□□□□□ -0.89
VMP1-202ENST00000585847 TMEM183AQ8IXX5 376 aa9.5□□□□□ -0.89
VMP1-202ENST00000585847 ISOC2Q96AB3 205 aa9.5□□□□□ -0.89
VMP1-202ENST00000585847 DERL1Q9BUN8 251 aa9.5□□□□□ -0.89
VMP1-202ENST00000585847 RPS10P5Q9NQ39 176 aa9.5□□□□□ -0.89
VMP1-202ENST00000585847 OSTCQ9NRP0 149 aa9.5□□□□□ -0.89
VMP1-202ENST00000585847 NOTCH3Q9UM47 2321 aa9.49□□□□□ -0.89
VMP1-202ENST00000585847 IGHV3-66A0A0C4DH42 116 aa9.49□□□□□ -0.89
VMP1-202ENST00000585847 G3V4G9 280 aa9.49□□□□□ -0.89
VMP1-202ENST00000585847 S100PP25815 95 aa9.49□□□□□ -0.89
VMP1-202ENST00000585847 TMEM78Q5T7P6 136 aa9.49□□□□□ -0.89
VMP1-202ENST00000585847 KCNIP4Q6PIL6 250 aa9.49□□□□□ -0.89
VMP1-202ENST00000585847 OR10J6PQ8NGY7 276 aa9.49□□□□□ -0.89
VMP1-202ENST00000585847 DCANP1Q8TF63 244 aa9.49□□□□□ -0.89
VMP1-202ENST00000585847 SFRP2Q96HF1 295 aa9.49□□□□□ -0.89
VMP1-202ENST00000585847 LINC00477Q96M19 166 aa9.49□□□□□ -0.89
VMP1-202ENST00000585847 C17orf77Q96MU5 243 aa9.49□□□□□ -0.89
VMP1-202ENST00000585847 ODF3Q96PU9 254 aa9.49□□□□□ -0.89
VMP1-202ENST00000585847 MCRIP2Q9BUT9 160 aaKnown RBP9.49□□□□□ -0.89
VMP1-202ENST00000585847 MLST8Q9BVC4 326 aa9.49□□□□□ -0.89
VMP1-202ENST00000585847 IGHV3OR16-13A0A075B7E8 117 aa9.48□□□□□ -0.89
VMP1-202ENST00000585847 IGHV3-49A0A0A0MS15 119 aa9.48□□□□□ -0.89
VMP1-202ENST00000585847 IGHV3-74A0A0B4J1X5 117 aa9.48□□□□□ -0.89
VMP1-202ENST00000585847 TRAV8-2A0A0B4J237 113 aa9.48□□□□□ -0.89
VMP1-202ENST00000585847 H3BTX0 84 aa9.48□□□□□ -0.89
VMP1-202ENST00000585847 DNASE2O00115 360 aaPredicted RBP9.48□□□□□ -0.89
VMP1-202ENST00000585847 GNG5P63218 68 aa9.48□□□□□ -0.89
VMP1-202ENST00000585847 C9orf47Q6ZRZ4 202 aa9.48□□□□□ -0.89
VMP1-202ENST00000585847 OR4B1Q8NGF8 309 aa9.48□□□□□ -0.89
VMP1-202ENST00000585847 FAM110AQ9BQ89 295 aa9.48□□□□□ -0.89
VMP1-202ENST00000585847 GPR61Q9BZJ8 451 aa9.48□□□□□ -0.89
VMP1-202ENST00000585847 MS4A6AQ9H2W1 248 aa9.48□□□□□ -0.89
VMP1-202ENST00000585847 PSG8Q9UQ74 426 aa9.48□□□□□ -0.89
VMP1-202ENST00000585847 SELENOKQ9Y6D0 94 aa9.48□□□□□ -0.89
VMP1-202ENST00000585847 FAM231BA6NCW3 169 aa9.47□□□□□ -0.89
VMP1-202ENST00000585847 NPIPB6E9PJ23 425 aa9.47□□□□□ -0.89
VMP1-202ENST00000585847 K7EQG2 157 aa9.47□□□□□ -0.89
VMP1-202ENST00000585847 M0R3E3 92 aa9.47□□□□□ -0.89
VMP1-202ENST00000585847 IGLV1-51P01701 117 aa9.47□□□□□ -0.89
VMP1-202ENST00000585847 IGLV2-11P01706 119 aa9.47□□□□□ -0.89
VMP1-202ENST00000585847 ZNF138P52744 262 aa9.47□□□□□ -0.89
VMP1-202ENST00000585847 C9orf66Q5T8R8 295 aa9.47□□□□□ -0.89
VMP1-202ENST00000585847 ZNF738Q8NE65 137 aa9.47□□□□□ -0.89
VMP1-202ENST00000585847 OR10G8Q8NGN5 311 aa9.47□□□□□ -0.89
VMP1-202ENST00000585847 OCC1Q8TAD7 63 aa9.47□□□□□ -0.89
VMP1-202ENST00000585847 RPH3ALQ9UNE2 315 aa9.47□□□□□ -0.89
VMP1-202ENST00000585847 XKRY2A2RUG3 117 aa9.46□□□□□ -0.9
VMP1-202ENST00000585847 IZUMO1RA6ND01 250 aa9.46□□□□□ -0.9
VMP1-202ENST00000585847 SAP30O75446 220 aa9.46□□□□□ -0.9
VMP1-202ENST00000585847 DUSP14O95147 198 aaKnown RBP9.46□□□□□ -0.9
VMP1-202ENST00000585847 IGLV2-8P01709 118 aa9.46□□□□□ -0.9
VMP1-202ENST00000585847 KRTAP10-11P60412 298 aa9.46□□□□□ -0.9
VMP1-202ENST00000585847 ERVFC1-1P60608 527 aa9.46□□□□□ -0.9
VMP1-202ENST00000585847 DEFB114Q30KQ6 69 aa9.46□□□□□ -0.9
VMP1-202ENST00000585847 BEAN1Q3B7T3 259 aa9.46□□□□□ -0.9
VMP1-202ENST00000585847 RNF212Q495C1 297 aa9.46□□□□□ -0.9
VMP1-202ENST00000585847 IBA57Q5T440 356 aaKnown RBP9.46□□□□□ -0.9
VMP1-202ENST00000585847 DAZAP1Q96EP5 407 aaKnown RBP9.46□□□□□ -0.9
VMP1-202ENST00000585847 SAV1Q9H4B6 383 aaPredicted RBP9.46□□□□□ -0.9
VMP1-202ENST00000585847 MGST1P10620 155 aaKnown RBP9.45□□□□□ -0.9
VMP1-202ENST00000585847 EGFEM1PQ0D2K5 195 aa9.45□□□□□ -0.9
VMP1-202ENST00000585847 SMUG1Q53HV7 270 aa9.45□□□□□ -0.9
VMP1-202ENST00000585847 KPRPQ5T749 579 aaPredicted RBP9.45□□□□□ -0.9
VMP1-202ENST00000585847 Q6AWC8 147 aa9.45□□□□□ -0.9
VMP1-202ENST00000585847 EBLN2Q6P2I7 272 aa9.45□□□□□ -0.9
VMP1-202ENST00000585847 FOXI2Q6ZQN5 318 aa9.45□□□□□ -0.9
VMP1-202ENST00000585847 GBGT1Q8N5D6 347 aa9.45□□□□□ -0.9
VMP1-202ENST00000585847 CLUHP3Q96NS8 147 aa9.45□□□□□ -0.9
VMP1-202ENST00000585847 PRR25Q96S07 402 aa9.45□□□□□ -0.9
VMP1-202ENST00000585847 ASCL2Q99929 193 aa9.45□□□□□ -0.9
VMP1-202ENST00000585847 SNRPCP09234 159 aaKnown RBP9.44□□□□□ -0.9
VMP1-202ENST00000585847 TSPOP30536 169 aa9.44□□□□□ -0.9
VMP1-202ENST00000585847 RPS20P60866 119 aaKnown RBP9.44□□□□□ -0.9
VMP1-202ENST00000585847 COX19Q49B96 90 aa9.44□□□□□ -0.9
VMP1-202ENST00000585847 ATRAIDQ6UW56 229 aa9.44□□□□□ -0.9
VMP1-202ENST00000585847 PRNTQ86SH4 94 aa9.44□□□□□ -0.9
VMP1-202ENST00000585847 OR8A1Q8NGG7 326 aa9.44□□□□□ -0.9
VMP1-202ENST00000585847 GFRA4Q9GZZ7 299 aa9.44□□□□□ -0.9
VMP1-202ENST00000585847 SORL1Q92673 2214 aa9.43□□□□□ -0.9
VMP1-202ENST00000585847 TRBV24-1A0A075B6N3 115 aa9.43□□□□□ -0.9
VMP1-202ENST00000585847 K7EN84 100 aa9.43□□□□□ -0.9
VMP1-202ENST00000585847 P01737 135 aa9.43□□□□□ -0.9
VMP1-202ENST00000585847 CRISP2P16562 243 aa9.43□□□□□ -0.9
VMP1-202ENST00000585847 CD300EQ496F6 205 aaPredicted RBP9.43□□□□□ -0.9
VMP1-202ENST00000585847 FAM162BQ5T6X4 162 aa9.43□□□□□ -0.9
VMP1-202ENST00000585847 TMEM61Q8N0U2 210 aa9.43□□□□□ -0.9
VMP1-202ENST00000585847 LINC00479Q96M42 142 aa9.43□□□□□ -0.9
VMP1-202ENST00000585847 ZMAT5Q9UDW3 170 aaKnown RBP9.43□□□□□ -0.9
VMP1-202ENST00000585847 IGKV2-40A0A087WW87 121 aaPredicted RBP9.42□□□□□ -0.9
VMP1-202ENST00000585847 TRAV34A0A0B4J273 112 aa9.42□□□□□ -0.9
VMP1-202ENST00000585847 C19orf71A6NCJ1 209 aa9.42□□□□□ -0.9
VMP1-202ENST00000585847 A8MWL6 223 aa9.42□□□□□ -0.9
VMP1-202ENST00000585847 IGKV2D-40P01614 121 aaPredicted RBP9.42□□□□□ -0.9
VMP1-202ENST00000585847 PRB2P02812 416 aaPredicted RBP9.42□□□□□ -0.9
VMP1-202ENST00000585847 CXCL1P09341 107 aa9.42□□□□□ -0.9
VMP1-202ENST00000585847 LEPP41159 167 aa9.42□□□□□ -0.9
VMP1-202ENST00000585847 BTN1A1Q13410 526 aa9.42□□□□□ -0.9
VMP1-202ENST00000585847 APRG1Q8IVJ8 170 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms