RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 PSMB3P49720 205 aa4.12□□□□□ -1.75
CDH8-213ENST00000584966 NKX2-5P52952 324 aaPredicted RBP4.12□□□□□ -1.75
CDH8-213ENST00000584966 CMC4P56277 68 aaPredicted RBP4.12□□□□□ -1.75
CDH8-213ENST00000584966 RHOBP62745 196 aa4.12□□□□□ -1.75
CDH8-213ENST00000584966 HAGHQ16775 308 aa4.12□□□□□ -1.75
CDH8-213ENST00000584966 ACOT6Q3I5F7 207 aaPredicted RBP4.12□□□□□ -1.75
CDH8-213ENST00000584966 TRPT1Q86TN4 253 aaKnown RBP4.12□□□□□ -1.75
CDH8-213ENST00000584966 RNF182Q8N6D2 247 aa4.12□□□□□ -1.75
CDH8-213ENST00000584966 OR10G4Q8NGN3 311 aa4.12□□□□□ -1.75
CDH8-213ENST00000584966 OR10G9Q8NGN4 311 aa4.12□□□□□ -1.75
CDH8-213ENST00000584966 OR10G7Q8NGN6 311 aa4.12□□□□□ -1.75
CDH8-213ENST00000584966 GNPNAT1Q96EK6 184 aaPredicted RBP4.12□□□□□ -1.75
CDH8-213ENST00000584966 B9D2Q9BPU9 175 aa4.12□□□□□ -1.75
CDH8-213ENST00000584966 TM2D3Q9BRN9 247 aa4.12□□□□□ -1.75
CDH8-213ENST00000584966 OR51M1Q9H341 326 aa4.12□□□□□ -1.75
CDH8-213ENST00000584966 KCNIP2Q9NS61 270 aa4.12□□□□□ -1.75
CDH8-213ENST00000584966 COX11Q9Y6N1 276 aa4.12□□□□□ -1.75
CDH8-213ENST00000584966 DNAH6Q9C0G6 4158 aa4.12□□□□□ -1.75
CDH8-213ENST00000584966 KANTRA0A1W2PQU2 76 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 ZNF705FA8MVS1 300 aaPredicted RBP4.11□□□□□ -1.75
CDH8-213ENST00000584966 PRAC2D3DTV9 90 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 F6UB75 175 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 H3BMM0 161 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 HMGB3O15347 200 aaKnown RBP4.11□□□□□ -1.75
CDH8-213ENST00000584966 ZNF253O75346 499 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 MBP02144 154 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 NBEAP1P0C6P0 100 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 SEC11BP0C7V7 166 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 PRB4P10163 310 aaPredicted RBP4.11□□□□□ -1.75
CDH8-213ENST00000584966 FHITP49789 147 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 MEOX2P50222 304 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 PSG3Q16557 428 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 ZFP69Q49AA0 526 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 TMEM41BQ5BJD5 291 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 PSMG4Q5JS54 123 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 FAM122CQ6P4D5 195 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 LCN15Q6UWW0 184 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 S100A7AQ86SG5 101 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 BAP18Q8IXM2 172 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 LINC00052Q96N35 136 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 ASCL2Q99929 193 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 PAXXQ9BUH6 204 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 ZNF471Q9BX82 626 aaPredicted RBP4.11□□□□□ -1.75
CDH8-213ENST00000584966 SAV1Q9H4B6 383 aaPredicted RBP4.11□□□□□ -1.75
CDH8-213ENST00000584966 RNF24Q9Y225 148 aa4.11□□□□□ -1.75
CDH8-213ENST00000584966 LOC102724200A0A096LPH7 203 aaPredicted RBP4.1□□□□□ -1.75
CDH8-213ENST00000584966 A0A0J9YX75 114 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 CTXND1A0A1B0GTU2 59 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 M0R3E3 92 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 OR10J4P0C629 311 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 ZNF705DP0CH99 300 aaPredicted RBP4.1□□□□□ -1.75
CDH8-213ENST00000584966 ZNF705BP0CI00 300 aaPredicted RBP4.1□□□□□ -1.75
CDH8-213ENST00000584966 HLA-DRB4P13762 266 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 RPL35AP18077 110 aaKnown RBP4.1□□□□□ -1.75
CDH8-213ENST00000584966 C4BPBP20851 252 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 ID1P41134 155 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 CDC34P49427 236 aaPredicted RBP4.1□□□□□ -1.75
CDH8-213ENST00000584966 SNRPD3P62318 126 aaKnown RBP4.1□□□□□ -1.75
CDH8-213ENST00000584966 PDE6HQ13956 83 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 GUK1Q16774 197 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 ACTL10Q5JWF8 245 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 SAMD13Q5VXD3 122 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 AMTNQ6UX39 209 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 FOXI2Q6ZQN5 318 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 SLC51BQ86UW2 128 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 EXOC3-AS1Q8N2X6 119 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 CSNK1G2-AS1Q8NCQ2 148 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 MBD3L1Q8WWY6 194 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 PHYHIPLQ96FC7 376 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 SLC50A1Q9BRV3 221 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 AAMDCQ9H7C9 122 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 TUBA4BQ9H853 241 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 HLA-DRB4X5D2U9 266 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 TENM2Q9NT68 2774 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 HYDINQ4G0P3 5121 aa4.1□□□□□ -1.75
CDH8-213ENST00000584966 ALMS1Q8TCU4 4167 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 KMT2CQ8NEZ4 4911 aaKnown RBP4.09□□□□□ -1.75
CDH8-213ENST00000584966 KIR2DL5BA0A0G2JN68 375 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 KIR2DL5BA0A0G2JPC4 375 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 A0A1W2PPV4 95 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 CRXO43186 299 aaPredicted RBP4.09□□□□□ -1.75
CDH8-213ENST00000584966 OR7C2O60412 319 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 PFDN1O60925 122 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 ARL14EPLP0DKL9 152 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 TPT1P13693 172 aaKnown RBP4.09□□□□□ -1.75
CDH8-213ENST00000584966 GCHFRP30047 84 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 SULT1A2P50226 295 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 TAS2R45P59539 299 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 KHDC3LQ587J8 217 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 PIK3CD-AS1Q5SR53 167 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 PQLC2Q6ZP29 291 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 KIR2DL5AQ8N109 375 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 OR8A1Q8NGG7 326 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 KIR2DL5BQ8NHK3 375 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 BLNKQ8WV28 456 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 TMED6Q8WW62 240 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 MRPL53Q96EL3 112 aaKnown RBP4.09□□□□□ -1.75
CDH8-213ENST00000584966 FAM19A4Q96LR4 140 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 OVOL2Q9BRP0 275 aa4.09□□□□□ -1.75
CDH8-213ENST00000584966 ACTR3CQ9C0K3 210 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms