RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 S100A9P06702 114 aaKnown RBP13.51□□□□□ -0.25
RFFL-211ENST00000584541 RPL35AP18077 110 aaKnown RBP13.51□□□□□ -0.25
RFFL-211ENST00000584541 UBE2G1P62253 170 aa13.51□□□□□ -0.25
RFFL-211ENST00000584541 C11orf52Q96A22 123 aa13.51□□□□□ -0.25
RFFL-211ENST00000584541 AGPAT4-IT1Q9H0P7 198 aa13.51□□□□□ -0.25
RFFL-211ENST00000584541 SMDT1Q9H4I9 107 aa13.51□□□□□ -0.25
RFFL-211ENST00000584541 MGAM2Q2M2H8 2515 aa13.5□□□□□ -0.25
RFFL-211ENST00000584541 RAB19A4D1S5 217 aa13.5□□□□□ -0.25
RFFL-211ENST00000584541 K7EIL1 84 aa13.5□□□□□ -0.25
RFFL-211ENST00000584541 NDUFS6O75380 124 aaKnown RBP13.5□□□□□ -0.25
RFFL-211ENST00000584541 ZNF138P52744 262 aa13.5□□□□□ -0.25
RFFL-211ENST00000584541 MORN3Q6PF18 240 aaPredicted RBP13.5□□□□□ -0.25
RFFL-211ENST00000584541 FMC1Q96HJ9 113 aa13.5□□□□□ -0.25
RFFL-211ENST00000584541 NDFIP1Q9BT67 221 aa13.5□□□□□ -0.25
RFFL-211ENST00000584541 MED9Q9NWA0 146 aa13.5□□□□□ -0.25
RFFL-211ENST00000584541 A8MTW9 85 aa13.49□□□□□ -0.25
RFFL-211ENST00000584541 TMEM250H0YL14 139 aa13.49□□□□□ -0.25
RFFL-211ENST00000584541 TSPOP30536 169 aa13.49□□□□□ -0.25
RFFL-211ENST00000584541 APOC4P55056 127 aa13.49□□□□□ -0.25
RFFL-211ENST00000584541 FLI1Q01543 452 aaPredicted RBP13.49□□□□□ -0.25
RFFL-211ENST00000584541 DEFB121Q5J5C9 76 aa13.49□□□□□ -0.25
RFFL-211ENST00000584541 ODF3Q96PU9 254 aa13.49□□□□□ -0.25
RFFL-211ENST00000584541 ZNF492Q9P255 531 aa13.49□□□□□ -0.25
RFFL-211ENST00000584541 PSG8Q9UQ74 426 aa13.49□□□□□ -0.25
RFFL-211ENST00000584541 TRAV8-1A0A0A6YYK1 113 aa13.48□□□□□ -0.25
RFFL-211ENST00000584541 RBMY1BA6NDE4 496 aaKnown RBP13.48□□□□□ -0.25
RFFL-211ENST00000584541 RBMY1EA6NEQ0 496 aaKnown RBP13.48□□□□□ -0.25
RFFL-211ENST00000584541 RBMY1DP0C7P1 496 aaKnown RBP13.48□□□□□ -0.25
RFFL-211ENST00000584541 CT45A10P0DMU9 189 aa13.48□□□□□ -0.25
RFFL-211ENST00000584541 LEPP41159 167 aa13.48□□□□□ -0.25
RFFL-211ENST00000584541 TMEM183BQ1AE95 376 aa13.48□□□□□ -0.25
RFFL-211ENST00000584541 PRNTQ86SH4 94 aa13.48□□□□□ -0.25
RFFL-211ENST00000584541 C2CD4CQ8TF44 421 aa13.48□□□□□ -0.25
RFFL-211ENST00000584541 SGK494Q96LW2 274 aa13.48□□□□□ -0.25
RFFL-211ENST00000584541 LINC00479Q96M42 142 aa13.48□□□□□ -0.25
RFFL-211ENST00000584541 LENEPQ9Y5L5 61 aa13.48□□□□□ -0.25
RFFL-211ENST00000584541 TRAV34A0A0B4J273 112 aa13.47□□□□□ -0.25
RFFL-211ENST00000584541 KIR2DL5BA0A0G2JN68 375 aa13.47□□□□□ -0.25
RFFL-211ENST00000584541 KIR2DL5BA0A0G2JPC4 375 aa13.47□□□□□ -0.25
RFFL-211ENST00000584541 TRBV7-9A0A0J9YWB2 115 aa13.47□□□□□ -0.25
RFFL-211ENST00000584541 AMBPP02760 352 aa13.47□□□□□ -0.25
RFFL-211ENST00000584541 KIR2DL5AQ8N109 375 aa13.47□□□□□ -0.25
RFFL-211ENST00000584541 KIR2DL5BQ8NHK3 375 aa13.47□□□□□ -0.25
RFFL-211ENST00000584541 Q8TAT8 98 aa13.47□□□□□ -0.25
RFFL-211ENST00000584541 CSTL1Q9H114 145 aa13.47□□□□□ -0.25
RFFL-211ENST00000584541 TREM1Q9NP99 234 aa13.47□□□□□ -0.25
RFFL-211ENST00000584541 KLF12Q9Y4X4 402 aa13.47□□□□□ -0.25
RFFL-211ENST00000584541 TRBV6-1A0A0K0K1D8 114 aa13.46□□□□□ -0.25
RFFL-211ENST00000584541 LINC00862A6NCI5 91 aa13.46□□□□□ -0.25
RFFL-211ENST00000584541 SRP19P09132 144 aaKnown RBP13.46□□□□□ -0.25
RFFL-211ENST00000584541 FRMD6-AS1P0C7T7 363 aa13.46□□□□□ -0.25
RFFL-211ENST00000584541 CEBPGP53567 150 aa13.46□□□□□ -0.25
RFFL-211ENST00000584541 SAPCD1Q5SSQ6 148 aa13.46□□□□□ -0.25
RFFL-211ENST00000584541 AMTNQ6UX39 209 aa13.46□□□□□ -0.25
RFFL-211ENST00000584541 MRAPQ8TCY5 172 aa13.46□□□□□ -0.25
RFFL-211ENST00000584541 C1QTNF4Q9BXJ3 329 aa13.46□□□□□ -0.25
RFFL-211ENST00000584541 SLC35B3Q9H1N7 401 aa13.46□□□□□ -0.25
RFFL-211ENST00000584541 IGLV2-11P01706 119 aa13.45□□□□□ -0.26
RFFL-211ENST00000584541 RPL35P42766 123 aaKnown RBP13.45□□□□□ -0.26
RFFL-211ENST00000584541 CDKN1BP46527 198 aa13.45□□□□□ -0.26
RFFL-211ENST00000584541 FXYD7P58549 80 aa13.45□□□□□ -0.26
RFFL-211ENST00000584541 TAS2R60P59551 318 aa13.45□□□□□ -0.26
RFFL-211ENST00000584541 SPINK13Q1W4C9 94 aa13.45□□□□□ -0.26
RFFL-211ENST00000584541 LINC00322Q6ZN03 302 aaPredicted RBP13.45□□□□□ -0.26
RFFL-211ENST00000584541 Q86TA4 180 aa13.45□□□□□ -0.26
RFFL-211ENST00000584541 COMMD7Q86VX2 200 aa13.45□□□□□ -0.26
RFFL-211ENST00000584541 ZFP30Q9Y2G7 519 aa13.45□□□□□ -0.26
RFFL-211ENST00000584541 M0R2Z0 102 aa13.44□□□□□ -0.26
RFFL-211ENST00000584541 UBE2CO00762 179 aa13.44□□□□□ -0.26
RFFL-211ENST00000584541 CA1P00915 261 aaPredicted RBP13.44□□□□□ -0.26
RFFL-211ENST00000584541 CRISP2P16562 243 aa13.44□□□□□ -0.26
RFFL-211ENST00000584541 SRSF3P84103 164 aaKnown RBP13.44□□□□□ -0.26
RFFL-211ENST00000584541 DEFA6Q01524 100 aa13.44□□□□□ -0.26
RFFL-211ENST00000584541 UQCC3Q6UW78 93 aa13.44□□□□□ -0.26
RFFL-211ENST00000584541 FAM19A4Q96LR4 140 aa13.44□□□□□ -0.26
RFFL-211ENST00000584541 DERL1Q9BUN8 251 aa13.44□□□□□ -0.26
RFFL-211ENST00000584541 GPX1P07203 203 aa13.43□□□□□ -0.26
RFFL-211ENST00000584541 ZNF674Q2M3X9 581 aa13.43□□□□□ -0.26
RFFL-211ENST00000584541 PARLQ9H300 379 aa13.43□□□□□ -0.26
RFFL-211ENST00000584541 DNAH3Q8TD57 4116 aa13.42□□□□□ -0.26
RFFL-211ENST00000584541 NOTCH1P46531 2555 aa13.42□□□□□ -0.26
RFFL-211ENST00000584541 J3KRW8 73 aa13.42□□□□□ -0.26
RFFL-211ENST00000584541 LTAP01374 205 aa13.42□□□□□ -0.26
RFFL-211ENST00000584541 GNG4P50150 75 aa13.42□□□□□ -0.26
RFFL-211ENST00000584541 BAGE2Q86Y30 109 aa13.42□□□□□ -0.26
RFFL-211ENST00000584541 ASCL2Q99929 193 aa13.42□□□□□ -0.26
RFFL-211ENST00000584541 XCL2Q9UBD3 114 aa13.42□□□□□ -0.26
RFFL-211ENST00000584541 INSP01308 110 aa13.41□□□□□ -0.26
RFFL-211ENST00000584541 SMUG1Q53HV7 270 aa13.41□□□□□ -0.26
RFFL-211ENST00000584541 CENPWQ5EE01 88 aa13.41□□□□□ -0.26
RFFL-211ENST00000584541 TVP23CQ96ET8 276 aa13.41□□□□□ -0.26
RFFL-211ENST00000584541 TRAV12-2A0A075B6T6 113 aa13.4□□□□□ -0.26
RFFL-211ENST00000584541 ZNF727A8MUV8 499 aa13.4□□□□□ -0.26
RFFL-211ENST00000584541 KLLNB2CW77 178 aa13.4□□□□□ -0.26
RFFL-211ENST00000584541 C9JQL5 133 aa13.4□□□□□ -0.26
RFFL-211ENST00000584541 RNASE4P34096 147 aaKnown RBP13.4□□□□□ -0.26
RFFL-211ENST00000584541 FAM74A3Q4VXF1 159 aa13.4□□□□□ -0.26
RFFL-211ENST00000584541 TMEM183AQ8IXX5 376 aa13.4□□□□□ -0.26
RFFL-211ENST00000584541 EIF4E3Q8N5X7 224 aaKnown RBP13.4□□□□□ -0.26
RFFL-211ENST00000584541 ZFAND2AQ8N6M9 145 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms