RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 NIPSNAP3BQ9BS92 247 aa8.62□□□□□ -1.03
CDRT1-207ENST00000583965 ATG101Q9BSB4 218 aa8.62□□□□□ -1.03
CDRT1-207ENST00000583965 PARLQ9H300 379 aa8.62□□□□□ -1.03
CDRT1-207ENST00000583965 TUBA4BQ9H853 241 aa8.62□□□□□ -1.03
CDRT1-207ENST00000583965 FBLL1A6NHQ2 334 aaKnown RBP8.61□□□□□ -1.03
CDRT1-207ENST00000583965 ZNF727A8MUV8 499 aa8.61□□□□□ -1.03
CDRT1-207ENST00000583965 PRAC2D3DTV9 90 aa8.61□□□□□ -1.03
CDRT1-207ENST00000583965 NPIPB6E9PJ23 425 aa8.61□□□□□ -1.03
CDRT1-207ENST00000583965 F6UB75 175 aa8.61□□□□□ -1.03
CDRT1-207ENST00000583965 PEX7O00628 323 aa8.61□□□□□ -1.03
CDRT1-207ENST00000583965 TCRAP04437 139 aa8.61□□□□□ -1.03
CDRT1-207ENST00000583965 IGHV4-30-4P0DP06 118 aa8.61□□□□□ -1.03
CDRT1-207ENST00000583965 HIST1H1AQ02539 215 aaPredicted RBP8.61□□□□□ -1.03
CDRT1-207ENST00000583965 RHEBQ15382 184 aa8.61□□□□□ -1.03
CDRT1-207ENST00000583965 GDF5OSQ5U4N7 250 aa8.61□□□□□ -1.03
CDRT1-207ENST00000583965 C9orf47Q6ZRZ4 202 aa8.61□□□□□ -1.03
CDRT1-207ENST00000583965 TRPT1Q86TN4 253 aaKnown RBP8.61□□□□□ -1.03
CDRT1-207ENST00000583965 C2CD4CQ8TF44 421 aa8.61□□□□□ -1.03
CDRT1-207ENST00000583965 TVP23CQ96ET8 276 aa8.61□□□□□ -1.03
CDRT1-207ENST00000583965 LINC00477Q96M19 166 aa8.61□□□□□ -1.03
CDRT1-207ENST00000583965 SMIM7Q9BQ49 75 aa8.61□□□□□ -1.03
CDRT1-207ENST00000583965 NAT8Q9UHE5 227 aa8.61□□□□□ -1.03
CDRT1-207ENST00000583965 IGKV2-40A0A087WW87 121 aaPredicted RBP8.6□□□□□ -1.03
CDRT1-207ENST00000583965 SCO2A0A1W2PP80 73 aa8.6□□□□□ -1.03
CDRT1-207ENST00000583965 B4DEV8 164 aa8.6□□□□□ -1.03
CDRT1-207ENST00000583965 C9JCJ5 164 aa8.6□□□□□ -1.03
CDRT1-207ENST00000583965 K7EIL1 84 aa8.6□□□□□ -1.03
CDRT1-207ENST00000583965 IGKV2D-40P01614 121 aaPredicted RBP8.6□□□□□ -1.03
CDRT1-207ENST00000583965 CNN1P51911 297 aaKnown RBP8.6□□□□□ -1.03
CDRT1-207ENST00000583965 DEFB1P60022 68 aa8.6□□□□□ -1.03
CDRT1-207ENST00000583965 NUTF2P61970 127 aaKnown RBP8.6□□□□□ -1.03
CDRT1-207ENST00000583965 GNG5P63218 68 aa8.6□□□□□ -1.03
CDRT1-207ENST00000583965 TMEM78Q5T7P6 136 aa8.6□□□□□ -1.03
CDRT1-207ENST00000583965 MORN3Q6PF18 240 aaPredicted RBP8.6□□□□□ -1.03
CDRT1-207ENST00000583965 ATRAIDQ6UW56 229 aa8.6□□□□□ -1.03
CDRT1-207ENST00000583965 GOLT1AQ6ZVE7 132 aa8.6□□□□□ -1.03
CDRT1-207ENST00000583965 OR4B1Q8NGF8 309 aa8.6□□□□□ -1.03
CDRT1-207ENST00000583965 ODF3Q96PU9 254 aa8.6□□□□□ -1.03
CDRT1-207ENST00000583965 SDF2L1Q9HCN8 221 aa8.6□□□□□ -1.03
CDRT1-207ENST00000583965 PPP1R14DQ9NXH3 145 aa8.6□□□□□ -1.03
CDRT1-207ENST00000583965 RPH3ALQ9UNE2 315 aa8.6□□□□□ -1.03
CDRT1-207ENST00000583965 LY96Q9Y6Y9 160 aa8.6□□□□□ -1.03
CDRT1-207ENST00000583965 LOC102724200A0A096LPH7 203 aaPredicted RBP8.59□□□□□ -1.03
CDRT1-207ENST00000583965 TRBV7-9A0A0J9YWB2 115 aa8.59□□□□□ -1.03
CDRT1-207ENST00000583965 PRB2P02812 416 aaPredicted RBP8.59□□□□□ -1.03
CDRT1-207ENST00000583965 S100A9P06702 114 aaKnown RBP8.59□□□□□ -1.03
CDRT1-207ENST00000583965 ZNF705DP0CH99 300 aaPredicted RBP8.59□□□□□ -1.03
CDRT1-207ENST00000583965 ZNF705BP0CI00 300 aaPredicted RBP8.59□□□□□ -1.03
CDRT1-207ENST00000583965 CEBPGP53567 150 aa8.59□□□□□ -1.03
CDRT1-207ENST00000583965 TMEM241Q24JQ0 296 aa8.59□□□□□ -1.03
CDRT1-207ENST00000583965 TMEM75Q8N9X5 138 aa8.59□□□□□ -1.03
CDRT1-207ENST00000583965 LENEPQ9Y5L5 61 aa8.59□□□□□ -1.03
CDRT1-207ENST00000583965 A0A087WWC5 75 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 KIR2DL5BA0A0G2JN68 375 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 KIR2DL5BA0A0G2JPC4 375 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 RBMY1BA6NDE4 496 aaKnown RBP8.58□□□□□ -1.04
CDRT1-207ENST00000583965 RBMY1EA6NEQ0 496 aaKnown RBP8.58□□□□□ -1.04
CDRT1-207ENST00000583965 AMBPP02760 352 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 RBMY1DP0C7P1 496 aaKnown RBP8.58□□□□□ -1.04
CDRT1-207ENST00000583965 AKR1C3P42330 323 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 ZNF138P52744 262 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 APOC4P55056 127 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 TAS2R60P59551 318 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 ERCC8Q13216 396 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 AMTNQ6UX39 209 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 LINC00322Q6ZN03 302 aaPredicted RBP8.58□□□□□ -1.04
CDRT1-207ENST00000583965 KIR2DL5AQ8N109 375 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 KIR2DL5BQ8NHK3 375 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 FMC1Q96HJ9 113 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 VGLL1Q99990 258 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 AGPAT4-IT1Q9H0P7 198 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 ZNF492Q9P255 531 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 KLF12Q9Y4X4 402 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 MEGF8Q7Z7M0 2845 aa8.58□□□□□ -1.04
CDRT1-207ENST00000583965 TRBV6-1A0A0K0K1D8 114 aa8.57□□□□□ -1.04
CDRT1-207ENST00000583965 C7orf77A4D0Y5 90 aa8.57□□□□□ -1.04
CDRT1-207ENST00000583965 M0R036 132 aa8.57□□□□□ -1.04
CDRT1-207ENST00000583965 IGKV3-20P01619 116 aa8.57□□□□□ -1.04
CDRT1-207ENST00000583965 RPL35AP18077 110 aaKnown RBP8.57□□□□□ -1.04
CDRT1-207ENST00000583965 TSPOP30536 169 aa8.57□□□□□ -1.04
CDRT1-207ENST00000583965 LEPP41159 167 aa8.57□□□□□ -1.04
CDRT1-207ENST00000583965 RPL35P42766 123 aaKnown RBP8.57□□□□□ -1.04
CDRT1-207ENST00000583965 UBE2G1P62253 170 aa8.57□□□□□ -1.04
CDRT1-207ENST00000583965 RPL23P62829 140 aaKnown RBP8.57□□□□□ -1.04
CDRT1-207ENST00000583965 FLI1Q01543 452 aaPredicted RBP8.57□□□□□ -1.04
CDRT1-207ENST00000583965 TMEM183BQ1AE95 376 aa8.57□□□□□ -1.04
CDRT1-207ENST00000583965 ZNF674Q2M3X9 581 aa8.57□□□□□ -1.04
CDRT1-207ENST00000583965 DERL1Q9BUN8 251 aa8.57□□□□□ -1.04
CDRT1-207ENST00000583965 C1QTNF4Q9BXJ3 329 aa8.57□□□□□ -1.04
CDRT1-207ENST00000583965 CSTL1Q9H114 145 aa8.57□□□□□ -1.04
CDRT1-207ENST00000583965 TRBV20OR9-2A0A075B6H5 130 aa8.56□□□□□ -1.04
CDRT1-207ENST00000583965 TRAV8-1A0A0A6YYK1 113 aa8.56□□□□□ -1.04
CDRT1-207ENST00000583965 UBE2CO00762 179 aa8.56□□□□□ -1.04
CDRT1-207ENST00000583965 SCO1O75880 301 aa8.56□□□□□ -1.04
CDRT1-207ENST00000583965 IGLV2-11P01706 119 aa8.56□□□□□ -1.04
CDRT1-207ENST00000583965 FRMD6-AS1P0C7T7 363 aa8.56□□□□□ -1.04
CDRT1-207ENST00000583965 CT45A10P0DMU9 189 aa8.56□□□□□ -1.04
CDRT1-207ENST00000583965 PRB4P10163 310 aaPredicted RBP8.56□□□□□ -1.04
CDRT1-207ENST00000583965 CRISP2P16562 243 aa8.56□□□□□ -1.04
CDRT1-207ENST00000583965 DEFA6Q01524 100 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms