RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 CACNG5Q9UF02 275 aa4.96□□□□□ -1.62
SMARCE1-217ENST00000580654 A0A087X0K7 114 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 RBFOX3A6NFN3 312 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 H3BRN7 92 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 ATG12O94817 140 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 IGHV3-30P01768 117 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 IGHV3-33P01772 117 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 IGHV3-30-3P0DP02 117 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 IGHV3-30-5P0DP03 117 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 PGAM2P15259 253 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 SDC2P34741 201 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 GPX4P36969 197 aaPredicted RBP4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 MXD1Q05195 221 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 MEF2DQ14814 521 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 TDRG1Q3Y452 100 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 CCDC190Q86UF4 302 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 ZNF680Q8NEM1 530 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 NUDT10Q8NFP7 164 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 OR4C5Q8NGB2 326 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 RNASE11Q8TAA1 199 aaKnown RBP4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 BAALCQ8WXS3 180 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 SLC35E1Q96K37 410 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 GEMIN7Q9H840 131 aaKnown RBP4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 CRCT1Q9UGL9 99 aa4.95□□□□□ -1.62
SMARCE1-217ENST00000580654 LOC100131303A0A0U1RQF7 123 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 GABARAPH6UMI1 98 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 MRPS12O15235 138 aaKnown RBP4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 GABARAPO95166 117 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 CDS2O95674 445 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 FABP1P07148 127 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 SFTA3P0C7M3 94 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 CT45A10P0DMU9 189 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 ORM2P19652 201 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 TNFSF8P32971 234 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 RCVRNP35243 200 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 POLR2GP62487 172 aaKnown RBP eCLIP4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 ANXA2RQ3ZCQ2 193 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 NOXA1Q86UR1 476 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 LHFPL1Q86WI0 220 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 LGI3Q8N145 548 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 TMEM37Q8WXS4 190 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 ZNF486Q96H40 463 aaPredicted RBP4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 LINC01600Q96MT4 127 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 TM2D2Q9BX73 214 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 NDUFA13Q9P0J0 144 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 TP53TG3Q9ULZ0 132 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 RNF24Q9Y225 148 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 TMEM56-RWDD3S4R434 201 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 U3KQ87 197 aa4.94□□□□□ -1.62
SMARCE1-217ENST00000580654 TRGV4A0A0C4DH28 118 aa4.93□□□□□ -1.62
SMARCE1-217ENST00000580654 RNF222A6NCQ9 220 aa4.93□□□□□ -1.62
SMARCE1-217ENST00000580654 CFDP00746 253 aaPredicted RBP4.93□□□□□ -1.62
SMARCE1-217ENST00000580654 PPT1P50897 306 aa4.93□□□□□ -1.62
SMARCE1-217ENST00000580654 AQP4P55087 323 aa4.93□□□□□ -1.62
SMARCE1-217ENST00000580654 RAB11AP62491 216 aa4.93□□□□□ -1.62
SMARCE1-217ENST00000580654 LAGE3Q14657 143 aa4.93□□□□□ -1.62
SMARCE1-217ENST00000580654 ZNF846Q147U1 533 aa4.93□□□□□ -1.62
SMARCE1-217ENST00000580654 GGNBP1Q5YKI7 109 aa4.93□□□□□ -1.62
SMARCE1-217ENST00000580654 AKAP14Q86UN6 197 aa4.93□□□□□ -1.62
SMARCE1-217ENST00000580654 SELENOHQ8IZQ5 122 aaKnown RBP4.93□□□□□ -1.62
SMARCE1-217ENST00000580654 SHANK2-AS3Q9BTD1 123 aa4.93□□□□□ -1.62
SMARCE1-217ENST00000580654 RBKSQ9H477 322 aa4.93□□□□□ -1.62
SMARCE1-217ENST00000580654 SSR3Q9UNL2 185 aa4.93□□□□□ -1.62
SMARCE1-217ENST00000580654 PANO1I0J062 215 aa4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 ORM1P02763 201 aa4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 SNRPCP09234 159 aaKnown RBP4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 RPL7P18124 248 aaKnown RBP4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 PRSS3P35030 304 aa4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 KRTAP10-8P60410 259 aa4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 RAB14P61106 215 aa4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 CD300CQ08708 224 aa4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 IBA57Q5T440 356 aaKnown RBP4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 Q6ZQT7 251 aa4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 EIF4E3Q8N5X7 224 aaKnown RBP4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 DTD1Q8TEA8 209 aa4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 PCNPQ8WW12 178 aaKnown RBP4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 ODF3Q96PU9 254 aa4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 TXNDC17Q9BRA2 123 aa4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 TMEM147Q9BVK8 224 aa4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 SLC25A31Q9H0C2 315 aa4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 TMEM222Q9H0R3 208 aa4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 ZNF331Q9NQX6 463 aaPredicted RBP4.92□□□□□ -1.62
SMARCE1-217ENST00000580654 C7orf71A4D174 169 aa4.91□□□□□ -1.62
SMARCE1-217ENST00000580654 PMS2P5A8MQ11 134 aa4.91□□□□□ -1.62
SMARCE1-217ENST00000580654 PRSS46E5RG02 174 aa4.91□□□□□ -1.62
SMARCE1-217ENST00000580654 SLC17A3O00476 420 aa4.91□□□□□ -1.62
SMARCE1-217ENST00000580654 LEPP41159 167 aa4.91□□□□□ -1.62
SMARCE1-217ENST00000580654 BTN1A1Q13410 526 aa4.91□□□□□ -1.62
SMARCE1-217ENST00000580654 STEAP1BQ6NZ63 245 aa4.91□□□□□ -1.62
SMARCE1-217ENST00000580654 FAM159AQ6UWV7 190 aa4.91□□□□□ -1.62
SMARCE1-217ENST00000580654 ERASQ7Z444 233 aa4.91□□□□□ -1.62
SMARCE1-217ENST00000580654 Q8N976 141 aa4.91□□□□□ -1.62
SMARCE1-217ENST00000580654 S100A16Q96FQ6 103 aaKnown RBP4.91□□□□□ -1.62
SMARCE1-217ENST00000580654 DNAJC30Q96LL9 226 aa4.91□□□□□ -1.62
SMARCE1-217ENST00000580654 CNBD2Q96M20 576 aa4.91□□□□□ -1.62
SMARCE1-217ENST00000580654 COPZ2Q9P299 210 aa4.91□□□□□ -1.62
SMARCE1-217ENST00000580654 RPH3ALQ9UNE2 315 aa4.91□□□□□ -1.62
SMARCE1-217ENST00000580654 TEX13DA0A0J9YY54 714 aaPredicted RBP4.9□□□□□ -1.63
SMARCE1-217ENST00000580654 A0A0U1RRA0 63 aa4.9□□□□□ -1.63
SMARCE1-217ENST00000580654 KLLNB2CW77 178 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 261 ms