RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 DPM3Q9P2X0 92 aa4.13□□□□□ -1.75
CDH8-206ENST00000580044 TIMM8BQ9Y5J9 83 aaPredicted RBP4.13□□□□□ -1.75
CDH8-206ENST00000580044 A0A1W2PPM0 123 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 FABP5P3A8MUU1 101 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 TIMM23O14925 209 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 ZNF207O43670 478 aaKnown RBP4.12□□□□□ -1.75
CDH8-206ENST00000580044 SMIM13P0DJ93 91 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 APELAP0DMC3 54 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 FABP2P12104 132 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 EVI2AP22794 236 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 COX7A1P24310 79 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 CD24P25063 80 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 ZFP36P26651 326 aaKnown RBP4.12□□□□□ -1.75
CDH8-206ENST00000580044 FCER1GP30273 86 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 CRIP1P50238 77 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 SRSF1Q07955 248 aaKnown RBP eCLIP4.12□□□□□ -1.75
CDH8-206ENST00000580044 FOXI1Q12951 378 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 C5orf64Q2M2E5 130 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 RUSC1-AS1Q66K80 236 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 GFRALQ6UXV0 394 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 ZNF562Q6V9R5 426 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 ADAMTSL5Q6ZMM2 481 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 C1orf122Q6ZSJ8 110 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 AMN1Q8IY45 258 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 MRPL53Q96EL3 112 aaKnown RBP4.12□□□□□ -1.75
CDH8-206ENST00000580044 ONECUT1Q9UBC0 465 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 TRIOBPQ9H2D6 2365 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 MALRD1Q5VYJ5 2156 aa4.12□□□□□ -1.75
CDH8-206ENST00000580044 LOC389332A0A1B0GUA5 103 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 TMEM213A2RRL7 107 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 PRSS47A8MTI9 375 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 ODF3BA8MYP8 253 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 LINC01619G3V211 115 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 G3V4G9 280 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 H3BUT2 72 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 J3QR89 54 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 K7EMI3 77 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 NDUFS7O75251 213 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 DPM2O94777 84 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 NCR2O95944 276 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 NPYP01303 97 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 IGKCP01834 107 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 EGR2P11161 476 aaPredicted RBP4.11□□□□□ -1.75
CDH8-206ENST00000580044 PLNP26678 52 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 NMUP48645 174 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 KLK9Q2XQG4 91 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 MINOS1Q5TGZ0 78 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 NEGR1Q7Z3B1 354 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 Q8N8P6 123 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 C17orf77Q96MU5 243 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 ATP6V0BQ99437 205 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 VKORC1Q9BQB6 163 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 TP73-AS1Q9UF72 201 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 KLK9Q9UKQ9 250 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 SPCS1Q9Y6A9 102 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 MINOS1-NBL1R4GNA1 71 aa4.11□□□□□ -1.75
CDH8-206ENST00000580044 SPTBN5Q9NRC6 3674 aaKnown RBP4.1□□□□□ -1.75
CDH8-206ENST00000580044 IGKV2-40A0A087WW87 121 aaPredicted RBP4.1□□□□□ -1.75
CDH8-206ENST00000580044 TMSB15BA0A087X1C1 80 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.1□□□□□ -1.75
CDH8-206ENST00000580044 LINC01549A6NIU2 74 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 NCBP2LA6PVI3 153 aaKnown RBP4.1□□□□□ -1.75
CDH8-206ENST00000580044 M0R3E3 92 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 KLK10O43240 276 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 GOSR1O95249 250 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 TNFRSF6BO95407 300 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 IGKV2D-40P01614 121 aaPredicted RBP4.1□□□□□ -1.75
CDH8-206ENST00000580044 ORM1P02763 201 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 PRSS1P07477 247 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 SCGB1A1P11684 91 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 SLC25A16P16260 332 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 PRTN3P24158 256 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 UQCRFS1P47985 274 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 KRTAP10-11P60412 298 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 EBI3Q14213 229 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 HES1Q14469 280 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 ODF1Q14990 250 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 FBXL19-AS1Q494R0 122 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 IL17RELQ6ZVW7 336 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 ERASQ7Z444 233 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 LHFPL4Q7Z7J7 247 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 MYOZ3Q8TDC0 251 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 MRAP2Q96G30 205 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 Q96MF0 132 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 CHAC1Q9BUX1 264 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 TM2D2Q9BX73 214 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 LENEPQ9Y5L5 61 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 VCANP13611 3396 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 KNTC1P50748 2209 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 TNRC18O15417 2968 aaPredicted RBP4.1□□□□□ -1.75
CDH8-206ENST00000580044 PLCE1Q9P212 2302 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 ZDBF2Q9HCK1 2354 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 EYSQ5T1H1 3165 aa4.1□□□□□ -1.75
CDH8-206ENST00000580044 ZGRF1Q86YA3 2104 aa4.09□□□□□ -1.75
CDH8-206ENST00000580044 IGHV4-4A0A075B6R2 117 aa4.09□□□□□ -1.75
CDH8-206ENST00000580044 TRAV12-1A0A0B4J245 112 aa4.09□□□□□ -1.75
CDH8-206ENST00000580044 PPP1R17O96001 155 aa4.09□□□□□ -1.75
CDH8-206ENST00000580044 FAM106CPP0CH98 169 aa4.09□□□□□ -1.75
CDH8-206ENST00000580044 LEPP41159 167 aa4.09□□□□□ -1.75
CDH8-206ENST00000580044 LOXL1Q08397 574 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms