RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 TIMM8BQ9Y5J9 83 aaPredicted RBP4.7□□□□□ -1.66
TRAF4-213ENST00000578917 IGHV4-4A0A075B6R2 117 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 PGPA6NDG6 321 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 CBY3A6NI87 242 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 LYRM9A8MSI8 78 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 SNURFLB1AK76 121 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 TAAR5O14804 337 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 SLC25A5P05141 298 aaKnown RBP4.69□□□□□ -1.66
TRAF4-213ENST00000578917 ATP6V0CP27449 155 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 CDC34P49427 236 aaPredicted RBP4.69□□□□□ -1.66
TRAF4-213ENST00000578917 ZNF138P52744 262 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 KIR3DS1Q14943 382 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 GFI1BQ5VTD9 330 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 RPL7L1Q6DKI1 246 aaKnown RBP4.69□□□□□ -1.66
TRAF4-213ENST00000578917 ZNF493Q6ZR52 646 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 PHYHIPLQ96FC7 376 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 C16orf74Q96GX8 76 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 ODF3Q96PU9 254 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 VGLL1Q99990 258 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 C20orf144Q9BQM9 153 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 Q9H3A6 140 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 NOP10Q9NPE3 64 aaKnown RBP4.69□□□□□ -1.66
TRAF4-213ENST00000578917 TNFSF18Q9UNG2 199 aa4.69□□□□□ -1.66
TRAF4-213ENST00000578917 C7orf71A4D174 169 aa4.68□□□□□ -1.66
TRAF4-213ENST00000578917 F5H768 121 aa4.68□□□□□ -1.66
TRAF4-213ENST00000578917 SMLR1H3BR10 107 aa4.68□□□□□ -1.66
TRAF4-213ENST00000578917 K7EQM0 130 aa4.68□□□□□ -1.66
TRAF4-213ENST00000578917 RGS13O14921 159 aa4.68□□□□□ -1.66
TRAF4-213ENST00000578917 ARL14EPLP0DKL9 152 aa4.68□□□□□ -1.66
TRAF4-213ENST00000578917 AKR1C8PQ5T2L2 129 aa4.68□□□□□ -1.66
TRAF4-213ENST00000578917 LGALS9CQ6DKI2 356 aa4.68□□□□□ -1.66
TRAF4-213ENST00000578917 C9orf47Q6ZRZ4 202 aa4.68□□□□□ -1.66
TRAF4-213ENST00000578917 TMEM263Q8WUH6 116 aaKnown RBP4.68□□□□□ -1.66
TRAF4-213ENST00000578917 RAB24Q969Q5 203 aa4.68□□□□□ -1.66
TRAF4-213ENST00000578917 PYGO2Q9BRQ0 406 aa4.68□□□□□ -1.66
TRAF4-213ENST00000578917 PSMG3Q9BT73 122 aaPredicted RBP4.68□□□□□ -1.66
TRAF4-213ENST00000578917 SH3BGRL3Q9H299 93 aa4.68□□□□□ -1.66
TRAF4-213ENST00000578917 OTORQ9NRC9 128 aa4.68□□□□□ -1.66
TRAF4-213ENST00000578917 APLNQ9ULZ1 77 aa4.68□□□□□ -1.66
TRAF4-213ENST00000578917 TRGV2A0A075B6R0 118 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 GAGE12BA1L429 117 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 RBAKDNA6NC62 111 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 RNF222A6NCQ9 220 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 DIRC3C9JPN6 131 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 PFDN1O60925 122 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 GAGE7O76087 117 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 CXorf1O96002 111 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 IFNA7P01567 189 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 ATP5G1P05496 136 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 NMBP08949 121 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 GAGE12FP0CL80 117 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 GAGE12GP0CL81 117 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 GAGE12IP0CL82 117 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 P0DMU3 169 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 FAM231AP0DMU4 169 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 FAM231CP0DMU5 169 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 ATP5G3P48201 142 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 CD300CQ08708 224 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 BTN1A1Q13410 526 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 OR5I1Q13606 314 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 LCE2DQ5TA82 110 aaPredicted RBP4.67□□□□□ -1.66
TRAF4-213ENST00000578917 GOLT1AQ6ZVE7 132 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 UBE2DNLQ8IWF7 75 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 Q8TAT8 98 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 ZNF503Q96F45 646 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 FAM210BQ96KR6 192 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 ARPC5LQ9BPX5 153 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 TMEM167BQ9NRX6 74 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 ZNF492Q9P255 531 aa4.67□□□□□ -1.66
TRAF4-213ENST00000578917 CSMD3Q7Z407 3707 aa4.66□□□□□ -1.66
TRAF4-213ENST00000578917 A0A0D9SG52 128 aa4.66□□□□□ -1.66
TRAF4-213ENST00000578917 KANTRA0A1W2PQU2 76 aa4.66□□□□□ -1.66
TRAF4-213ENST00000578917 STAG3L2P0CL84 134 aa4.66□□□□□ -1.66
TRAF4-213ENST00000578917 STAG3L3P0CL85 134 aa4.66□□□□□ -1.66
TRAF4-213ENST00000578917 GCHFRP30047 84 aa4.66□□□□□ -1.66
TRAF4-213ENST00000578917 SUMO1P63165 101 aaKnown RBP4.66□□□□□ -1.66
TRAF4-213ENST00000578917 TMEM88Q6PEY1 159 aa4.66□□□□□ -1.66
TRAF4-213ENST00000578917 FAM159AQ6UWV7 190 aa4.66□□□□□ -1.66
TRAF4-213ENST00000578917 EIF4E3Q8N5X7 224 aaKnown RBP4.66□□□□□ -1.66
TRAF4-213ENST00000578917 ZNF680Q8NEM1 530 aa4.66□□□□□ -1.66
TRAF4-213ENST00000578917 STOML3Q8TAV4 291 aa4.66□□□□□ -1.66
TRAF4-213ENST00000578917 ATG101Q9BSB4 218 aa4.66□□□□□ -1.66
TRAF4-213ENST00000578917 NDFIP1Q9BT67 221 aa4.66□□□□□ -1.66
TRAF4-213ENST00000578917 GSN-AS1Q9NRJ2 163 aa4.66□□□□□ -1.66
TRAF4-213ENST00000578917 NAGKQ9UJ70 344 aa4.66□□□□□ -1.66
TRAF4-213ENST00000578917 DNAH7Q8WXX0 4024 aa4.66□□□□□ -1.66
TRAF4-213ENST00000578917 RYR3Q15413 4870 aa4.65□□□□□ -1.66
TRAF4-213ENST00000578917 IGHV1OR15-1A0A075B7D0 117 aa4.65□□□□□ -1.67
TRAF4-213ENST00000578917 TRGV1A0A0A0MS02 117 aa4.65□□□□□ -1.67
TRAF4-213ENST00000578917 TRBV7-9A0A0J9YWB2 115 aa4.65□□□□□ -1.67
TRAF4-213ENST00000578917 KLLNB2CW77 178 aa4.65□□□□□ -1.67
TRAF4-213ENST00000578917 ZNF324O75467 553 aaPredicted RBP4.65□□□□□ -1.67
TRAF4-213ENST00000578917 NUDT3O95989 172 aa4.65□□□□□ -1.67
TRAF4-213ENST00000578917 CRISP2P16562 243 aa4.65□□□□□ -1.67
TRAF4-213ENST00000578917 UBE2G2P60604 165 aa4.65□□□□□ -1.67
TRAF4-213ENST00000578917 GNG5P63218 68 aa4.65□□□□□ -1.67
TRAF4-213ENST00000578917 EIF5AP63241 154 aaKnown RBP4.65□□□□□ -1.67
TRAF4-213ENST00000578917 MUC21Q5SSG8 566 aa4.65□□□□□ -1.67
TRAF4-213ENST00000578917 SSX7Q7RTT5 188 aa4.65□□□□□ -1.67
TRAF4-213ENST00000578917 ZFAND2AQ8N6M9 145 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms