RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 UPK3BQ9BT76 320 aa7.9□□□□□ -1.15
SMARCE1-214ENST00000578112 IGKV3-20P01619 116 aa7.89□□□□□ -1.15
SMARCE1-214ENST00000578112 HTN3P15516 51 aa7.89□□□□□ -1.15
SMARCE1-214ENST00000578112 PYY3Q5JQD4 70 aa7.89□□□□□ -1.15
SMARCE1-214ENST00000578112 PRSS46E5RG02 174 aa7.89□□□□□ -1.15
SMARCE1-214ENST00000578112 IFNA5P01569 189 aa7.89□□□□□ -1.15
SMARCE1-214ENST00000578112 Q8N1X5 172 aa7.89□□□□□ -1.15
SMARCE1-214ENST00000578112 C20orf173Q96LM9 149 aa7.89□□□□□ -1.15
SMARCE1-214ENST00000578112 NAA50Q9GZZ1 169 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-214ENST00000578112 ARV1Q9H2C2 271 aa7.89□□□□□ -1.15
SMARCE1-214ENST00000578112 H3BRN7 92 aa7.88□□□□□ -1.15
SMARCE1-214ENST00000578112 EREGO14944 169 aa7.88□□□□□ -1.15
SMARCE1-214ENST00000578112 CRXO43186 299 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-214ENST00000578112 APOC3P02656 99 aa7.88□□□□□ -1.15
SMARCE1-214ENST00000578112 CNN1P51911 297 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-214ENST00000578112 LYZL2Q7Z4W2 148 aa7.88□□□□□ -1.15
SMARCE1-214ENST00000578112 LINC00612Q8N6U2 182 aa7.88□□□□□ -1.15
SMARCE1-214ENST00000578112 UBE2MP61081 183 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-214ENST00000578112 TMEM128Q5BJH2 165 aa7.88□□□□□ -1.15
SMARCE1-214ENST00000578112 SHANK2-AS3Q9BTD1 123 aa7.88□□□□□ -1.15
SMARCE1-214ENST00000578112 RSG1Q9BU20 258 aa7.88□□□□□ -1.15
SMARCE1-214ENST00000578112 DNAH2Q9P225 4427 aa7.87□□□□□ -1.15
SMARCE1-214ENST00000578112 C20orf202A1L168 122 aa7.87□□□□□ -1.15
SMARCE1-214ENST00000578112 K7EPK0 472 aa7.87□□□□□ -1.15
SMARCE1-214ENST00000578112 TNP2Q05952 138 aa7.87□□□□□ -1.15
SMARCE1-214ENST00000578112 CDPF1Q6NVV7 123 aa7.87□□□□□ -1.15
SMARCE1-214ENST00000578112 MTURNQ8N3F0 131 aa7.87□□□□□ -1.15
SMARCE1-214ENST00000578112 MAPKAPK5-AS1Q8N8E1 139 aa7.87□□□□□ -1.15
SMARCE1-214ENST00000578112 SNHG12Q9BXW3 62 aa7.87□□□□□ -1.15
SMARCE1-214ENST00000578112 TIMM8BQ9Y5J9 83 aaPredicted RBP7.87□□□□□ -1.15
SMARCE1-214ENST00000578112 TRAV26-1A0A087WT03 109 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 PLAC8L1A1L4L8 177 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 SYNGR2O43760 224 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 RAP2BP61225 183 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 TMEM263Q8WUH6 116 aaKnown RBP7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 C17orf77Q96MU5 243 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 SLC25A21Q9BQT8 299 aaPredicted RBP7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 TRAV8-2A0A0B4J237 113 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 F5H768 121 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 F6UB75 175 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 H7BYZ3 331 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 SNAI2O43623 268 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 OR2F1Q13607 317 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 FAAP20Q6NZ36 180 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 ACOT7LQ6ZUV0 252 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 BAP18Q8IXM2 172 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 DIRAS2Q96HU8 199 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 ODF3Q96PU9 254 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 SLC50A1Q9BRV3 221 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 GPN1Q9HCN4 374 aaPredicted RBP7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 HIGD1AQ9Y241 93 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 ZFP30Q9Y2G7 519 aa7.86□□□□□ -1.15
SMARCE1-214ENST00000578112 RYR1P21817 5038 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 IGKV1OR2-108A0A075B7D4 117 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 SIVA1O15304 175 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 RPS20P60866 119 aaKnown RBP7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 CLINT1Q14677 625 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 CYP2G1PQ6ZSU1 146 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 TMED4Q7Z7H5 227 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 OR8A1Q8NGG7 326 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 PCNPQ8WW12 178 aaKnown RBP7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 SOSTQ9BQB4 213 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 Q9H3A6 140 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 DNAJC4Q9NNZ3 241 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 LINC00588Q9Y4M8 146 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 PKD1P98161 4303 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 ZNF705GA8MUZ8 300 aaPredicted RBP7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 SNRPCP09234 159 aaKnown RBP7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 S100A2P29034 98 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 DEFB1P60022 68 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 SPINK13Q1W4C9 94 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 ZNF738Q8NE65 137 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 RNF141Q8WVD5 230 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 MUC4Q99102 2169 aa7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 SLC25A39Q9BZJ4 359 aaPredicted RBP7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 MRPS16Q9Y3D3 137 aaKnown RBP7.85□□□□□ -1.15
SMARCE1-214ENST00000578112 GOSR2O14653 212 aa7.84□□□□□ -1.15
SMARCE1-214ENST00000578112 HYPMO75409 117 aa7.84□□□□□ -1.15
SMARCE1-214ENST00000578112 RRAS2P62070 204 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1-214ENST00000578112 DLK1P80370 383 aa7.84□□□□□ -1.15
SMARCE1-214ENST00000578112 CCDC190Q86UF4 302 aa7.84□□□□□ -1.15
SMARCE1-214ENST00000578112 RXFP4Q8TDU9 374 aa7.84□□□□□ -1.15
SMARCE1-214ENST00000578112 C18orf15Q96N68 181 aa7.84□□□□□ -1.15
SMARCE1-214ENST00000578112 LINC01587Q99440 93 aa7.84□□□□□ -1.15
SMARCE1-214ENST00000578112 SFT2D2O95562 160 aa7.84□□□□□ -1.15
SMARCE1-214ENST00000578112 NUDT3O95989 172 aa7.84□□□□□ -1.15
SMARCE1-214ENST00000578112 AKR1C1Q04828 323 aa7.84□□□□□ -1.15
SMARCE1-214ENST00000578112 CST9LP1Q5W188 147 aa7.84□□□□□ -1.15
SMARCE1-214ENST00000578112 LCN15Q6UWW0 184 aa7.84□□□□□ -1.15
SMARCE1-214ENST00000578112 CCDC32Q9BV29 185 aa7.84□□□□□ -1.15
SMARCE1-214ENST00000578112 SLC25A22Q9H936 323 aa7.84□□□□□ -1.15
SMARCE1-214ENST00000578112 RAB32Q13637 225 aa7.83□□□□□ -1.16
SMARCE1-214ENST00000578112 KRTAP4-5Q9BYR2 181 aa7.83□□□□□ -1.16
SMARCE1-214ENST00000578112 WFDC1Q9HC57 220 aa7.83□□□□□ -1.16
SMARCE1-214ENST00000578112 DEFB130BP0DP73 79 aa7.83□□□□□ -1.16
SMARCE1-214ENST00000578112 DEFB130AP0DP74 79 aa7.83□□□□□ -1.16
SMARCE1-214ENST00000578112 IAPPP10997 89 aa7.83□□□□□ -1.16
SMARCE1-214ENST00000578112 ORM2P19652 201 aa7.83□□□□□ -1.16
SMARCE1-214ENST00000578112 CXCL3P19876 107 aa7.83□□□□□ -1.16
SMARCE1-214ENST00000578112 LINC00467Q9BRT7 94 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 517.5 ms