RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 C18orf65Q6ZTR6 163 aa10.67□□□□□ -0.7
SREBF1-217ENST00000577897 SBSPONQ8IVN8 264 aa10.67□□□□□ -0.7
SREBF1-217ENST00000577897 PEF1Q9UBV8 284 aaKnown RBP10.67□□□□□ -0.7
SREBF1-217ENST00000577897 PGPEP1LA6NFU8 196 aa10.66□□□□□ -0.7
SREBF1-217ENST00000577897 ZNF705GA8MUZ8 300 aaPredicted RBP10.66□□□□□ -0.7
SREBF1-217ENST00000577897 MRPS12O15235 138 aaKnown RBP10.66□□□□□ -0.7
SREBF1-217ENST00000577897 GNG5P63218 68 aa10.66□□□□□ -0.7
SREBF1-217ENST00000577897 CFHR3Q02985 330 aa10.66□□□□□ -0.7
SREBF1-217ENST00000577897 SIGLEC15Q6ZMC9 328 aa10.66□□□□□ -0.7
SREBF1-217ENST00000577897 DUX3Q96PT4 197 aa10.66□□□□□ -0.7
SREBF1-217ENST00000577897 LOC105371267A0A1B0GV96 52 aa10.65□□□□□ -0.7
SREBF1-217ENST00000577897 ZNF320A2RRD8 509 aa10.65□□□□□ -0.7
SREBF1-217ENST00000577897 K7EN84 100 aa10.65□□□□□ -0.7
SREBF1-217ENST00000577897 LTAP01374 205 aa10.65□□□□□ -0.7
SREBF1-217ENST00000577897 TYMSP04818 313 aa10.65□□□□□ -0.7
SREBF1-217ENST00000577897 CXCL1P09341 107 aa10.65□□□□□ -0.7
SREBF1-217ENST00000577897 CT45A10P0DMU9 189 aa10.65□□□□□ -0.7
SREBF1-217ENST00000577897 SAPCD1Q5SSQ6 148 aa10.65□□□□□ -0.7
SREBF1-217ENST00000577897 GOLT1AQ6ZVE7 132 aa10.65□□□□□ -0.7
SREBF1-217ENST00000577897 TMEM183AQ8IXX5 376 aa10.65□□□□□ -0.7
SREBF1-217ENST00000577897 EXOC3-AS1Q8N2X6 119 aa10.65□□□□□ -0.7
SREBF1-217ENST00000577897 NDFIP1Q9BT67 221 aa10.65□□□□□ -0.7
SREBF1-217ENST00000577897 ZNF492Q9P255 531 aa10.65□□□□□ -0.7
SREBF1-217ENST00000577897 SMAD5-AS1Q9Y6J3 95 aa10.65□□□□□ -0.7
SREBF1-217ENST00000577897 IGHV3-35A0A0C4DH35 117 aa10.64□□□□□ -0.71
SREBF1-217ENST00000577897 DIRC3C9JPN6 131 aa10.64□□□□□ -0.71
SREBF1-217ENST00000577897 H3BTX0 84 aa10.64□□□□□ -0.71
SREBF1-217ENST00000577897 K7EMT4 169 aa10.64□□□□□ -0.71
SREBF1-217ENST00000577897 SNRPCP09234 159 aaKnown RBP10.64□□□□□ -0.71
SREBF1-217ENST00000577897 PSMB8P28062 276 aa10.64□□□□□ -0.71
SREBF1-217ENST00000577897 PSG3Q16557 428 aa10.64□□□□□ -0.71
SREBF1-217ENST00000577897 WDR73Q6P4I2 378 aa10.64□□□□□ -0.71
SREBF1-217ENST00000577897 KLHL30-AS1Q8NEE0 82 aa10.64□□□□□ -0.71
SREBF1-217ENST00000577897 OR4B1Q8NGF8 309 aa10.64□□□□□ -0.71
SREBF1-217ENST00000577897 MRPL53Q96EL3 112 aaKnown RBP10.64□□□□□ -0.71
SREBF1-217ENST00000577897 SAV1Q9H4B6 383 aaPredicted RBP10.64□□□□□ -0.71
SREBF1-217ENST00000577897 ZMAT4Q9H898 229 aa10.64□□□□□ -0.71
SREBF1-217ENST00000577897 UFC1Q9Y3C8 167 aa10.64□□□□□ -0.71
SREBF1-217ENST00000577897 TRAV34A0A0B4J273 112 aa10.63□□□□□ -0.71
SREBF1-217ENST00000577897 P01737 135 aa10.63□□□□□ -0.71
SREBF1-217ENST00000577897 OR5I1Q13606 314 aa10.63□□□□□ -0.71
SREBF1-217ENST00000577897 CT83Q5H943 113 aa10.63□□□□□ -0.71
SREBF1-217ENST00000577897 C9orf66Q5T8R8 295 aa10.63□□□□□ -0.71
SREBF1-217ENST00000577897 PRNTQ86SH4 94 aa10.63□□□□□ -0.71
SREBF1-217ENST00000577897 Q86TA4 180 aa10.63□□□□□ -0.71
SREBF1-217ENST00000577897 GPHB5Q86YW7 130 aa10.63□□□□□ -0.71
SREBF1-217ENST00000577897 U3KQE9 123 aa10.63□□□□□ -0.71
SREBF1-217ENST00000577897 V9GYV3 84 aa10.63□□□□□ -0.71
SREBF1-217ENST00000577897 XKRY2A2RUG3 117 aa10.62□□□□□ -0.71
SREBF1-217ENST00000577897 RBAKDNA6NC62 111 aa10.62□□□□□ -0.71
SREBF1-217ENST00000577897 A8MWL6 223 aa10.62□□□□□ -0.71
SREBF1-217ENST00000577897 IGLV2-8P01709 118 aa10.62□□□□□ -0.71
SREBF1-217ENST00000577897 IGHV3-11P01762 117 aa10.62□□□□□ -0.71
SREBF1-217ENST00000577897 C16orf54Q6UWD8 224 aa10.62□□□□□ -0.71
SREBF1-217ENST00000577897 ZFP82Q8N141 532 aa10.62□□□□□ -0.71
SREBF1-217ENST00000577897 GBGT1Q8N5D6 347 aa10.62□□□□□ -0.71
SREBF1-217ENST00000577897 UBE2E2Q96LR5 201 aa10.62□□□□□ -0.71
SREBF1-217ENST00000577897 LINC00479Q96M42 142 aa10.62□□□□□ -0.71
SREBF1-217ENST00000577897 ZNF331Q9NQX6 463 aaPredicted RBP10.62□□□□□ -0.71
SREBF1-217ENST00000577897 DAZ1Q9NQZ3 744 aaKnown RBP10.62□□□□□ -0.71
SREBF1-217ENST00000577897 PSG8Q9UQ74 426 aa10.62□□□□□ -0.71
SREBF1-217ENST00000577897 ZNF256Q9Y2P7 627 aaPredicted RBP10.62□□□□□ -0.71
SREBF1-217ENST00000577897 MT-ND6P03923 174 aa10.61□□□□□ -0.71
SREBF1-217ENST00000577897 TRGC2P03986 189 aa10.61□□□□□ -0.71
SREBF1-217ENST00000577897 PRR27Q6MZM9 219 aa10.61□□□□□ -0.71
SREBF1-217ENST00000577897 RASL11AQ6T310 242 aa10.61□□□□□ -0.71
SREBF1-217ENST00000577897 MLST8Q9BVC4 326 aa10.61□□□□□ -0.71
SREBF1-217ENST00000577897 RNASE7Q9H1E1 156 aaKnown RBP10.61□□□□□ -0.71
SREBF1-217ENST00000577897 KLK15Q9H2R5 256 aa10.61□□□□□ -0.71
SREBF1-217ENST00000577897 NAT8BQ9UHF3 227 aa10.61□□□□□ -0.71
SREBF1-217ENST00000577897 FAM231BA6NCW3 169 aa10.6□□□□□ -0.71
SREBF1-217ENST00000577897 SLC17A3O00476 420 aa10.6□□□□□ -0.71
SREBF1-217ENST00000577897 LGALS1P09382 135 aaKnown RBP10.6□□□□□ -0.71
SREBF1-217ENST00000577897 NUDT10Q8NFP7 164 aa10.6□□□□□ -0.71
SREBF1-217ENST00000577897 TSKUQ8WUA8 353 aa10.6□□□□□ -0.71
SREBF1-217ENST00000577897 NUDT11Q96G61 164 aa10.6□□□□□ -0.71
SREBF1-217ENST00000577897 C16orf92Q96LL3 132 aa10.6□□□□□ -0.71
SREBF1-217ENST00000577897 C17orf77Q96MU5 243 aa10.6□□□□□ -0.71
SREBF1-217ENST00000577897 GFRA4Q9GZZ7 299 aa10.6□□□□□ -0.71
SREBF1-217ENST00000577897 RPP21Q9H633 154 aaKnown RBP10.6□□□□□ -0.71
SREBF1-217ENST00000577897 TRAPPC1Q9Y5R8 145 aa10.6□□□□□ -0.71
SREBF1-217ENST00000577897 IGHV3OR16-8A0A075B7F1 116 aa10.59□□□□□ -0.71
SREBF1-217ENST00000577897 IGHV7-4-1A0A0J9YVY3 117 aa10.59□□□□□ -0.71
SREBF1-217ENST00000577897 SMIM27A0A1W2PRY6 76 aa10.59□□□□□ -0.71
SREBF1-217ENST00000577897 IZUMO1RA6ND01 250 aa10.59□□□□□ -0.71
SREBF1-217ENST00000577897 LCN12Q6JVE5 192 aa10.59□□□□□ -0.71
SREBF1-217ENST00000577897 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.59□□□□□ -0.71
SREBF1-217ENST00000577897 RNF152Q8N8N0 203 aa10.59□□□□□ -0.71
SREBF1-217ENST00000577897 NHLRC2Q8NBF2 726 aa10.59□□□□□ -0.71
SREBF1-217ENST00000577897 RAX2Q96IS3 184 aa10.59□□□□□ -0.71
SREBF1-217ENST00000577897 CCL24O00175 119 aa10.58□□□□□ -0.72
SREBF1-217ENST00000577897 CHEK1O14757 476 aa10.58□□□□□ -0.72
SREBF1-217ENST00000577897 FRMD6-AS1P0C7T7 363 aa10.58□□□□□ -0.72
SREBF1-217ENST00000577897 ID1P41134 155 aa10.58□□□□□ -0.72
SREBF1-217ENST00000577897 DEFB136Q30KP8 78 aa10.58□□□□□ -0.72
SREBF1-217ENST00000577897 Q6AWC8 147 aa10.58□□□□□ -0.72
SREBF1-217ENST00000577897 ATP5L2Q7Z4Y8 100 aa10.58□□□□□ -0.72
SREBF1-217ENST00000577897 GLMPQ8WWB7 406 aa10.58□□□□□ -0.72
SREBF1-217ENST00000577897 FRZBQ92765 325 aa10.58□□□□□ -0.72
SREBF1-217ENST00000577897 BORCS7Q96B45 105 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms