RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 DOCK10Q96BY6 2186 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 OTOGLQ3ZCN5 2332 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 FGD6Q6ZV73 1430 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 USP54Q70EL1 1684 aa0.88□□□□□ -2.27
COPS3-213ENST00000577210 SYNJ1O43426 1573 aa0.87□□□□□ -2.27
COPS3-213ENST00000577210 COL1A1P02452 1464 aaPredicted RBP0.87□□□□□ -2.27
COPS3-213ENST00000577210 A0A087WSZ3 146 aa0.87□□□□□ -2.27
COPS3-213ENST00000577210 CCL25O15444 150 aa0.87□□□□□ -2.27
COPS3-213ENST00000577210 DBIP07108 87 aaKnown RBP0.87□□□□□ -2.27
COPS3-213ENST00000577210 SAA1P0DJI8 122 aaPredicted RBP0.87□□□□□ -2.27
COPS3-213ENST00000577210 LYNX1P0DP58 116 aa0.87□□□□□ -2.27
COPS3-213ENST00000577210 SLC25A4P12235 298 aa0.87□□□□□ -2.27
COPS3-213ENST00000577210 COX7CP15954 63 aa0.87□□□□□ -2.27
COPS3-213ENST00000577210 SNRPD3P62318 126 aaKnown RBP0.87□□□□□ -2.27
COPS3-213ENST00000577210 BLCAPP62952 87 aa0.87□□□□□ -2.27
COPS3-213ENST00000577210 SMIM21Q3B7S5 101 aa0.87□□□□□ -2.27
COPS3-213ENST00000577210 TMEM244Q5VVB8 128 aa0.87□□□□□ -2.27
COPS3-213ENST00000577210 FOXI2Q6ZQN5 318 aa0.87□□□□□ -2.27
COPS3-213ENST00000577210 TSTD1Q8NFU3 115 aa0.87□□□□□ -2.27
COPS3-213ENST00000577210 CCL4L1Q8NHW4 92 aa0.87□□□□□ -2.27
COPS3-213ENST00000577210 C10orf105Q8TEF2 133 aa0.87□□□□□ -2.27
COPS3-213ENST00000577210 NABP2Q9BQ15 211 aa0.87□□□□□ -2.27
COPS3-213ENST00000577210 MYLKQ15746 1914 aa0.87□□□□□ -2.27
COPS3-213ENST00000577210 FN1P02751 2386 aaKnown RBP0.86□□□□□ -2.27
COPS3-213ENST00000577210 FER1L6Q2WGJ9 1857 aa0.86□□□□□ -2.27
COPS3-213ENST00000577210 MDC1Q14676 2089 aaKnown RBP0.86□□□□□ -2.27
COPS3-213ENST00000577210 BORCS7-ASMTA0A0B4J1R7 106 aa0.86□□□□□ -2.27
COPS3-213ENST00000577210 M0R129 80 aa0.86□□□□□ -2.27
COPS3-213ENST00000577210 CDC42EP2O14613 210 aa0.86□□□□□ -2.27
COPS3-213ENST00000577210 UQCRQO14949 82 aa0.86□□□□□ -2.27
COPS3-213ENST00000577210 PRB4P10163 310 aaPredicted RBP0.86□□□□□ -2.27
COPS3-213ENST00000577210 HIST1H1AQ02539 215 aaPredicted RBP0.86□□□□□ -2.27
COPS3-213ENST00000577210 MIR22HGQ0VDD5 57 aa0.86□□□□□ -2.27
COPS3-213ENST00000577210 Q6ZSA8 131 aa0.86□□□□□ -2.27
COPS3-213ENST00000577210 LINC00269Q8N2A0 174 aa0.86□□□□□ -2.27
COPS3-213ENST00000577210 OTOSQ8NHW6 89 aa0.86□□□□□ -2.27
COPS3-213ENST00000577210 LPAR5Q9H1C0 372 aa0.86□□□□□ -2.27
COPS3-213ENST00000577210 WFDC10AQ9H1F0 79 aa0.86□□□□□ -2.27
COPS3-213ENST00000577210 SPANXCQ9NY87 97 aa0.86□□□□□ -2.27
COPS3-213ENST00000577210 TMEM14CQ9P0S9 112 aa0.86□□□□□ -2.27
COPS3-213ENST00000577210 COPZ2Q9P299 210 aa0.86□□□□□ -2.27
COPS3-213ENST00000577210 ERBINQ96RT1 1412 aa0.86□□□□□ -2.27
COPS3-213ENST00000577210 ZCCHC6Q5VYS8 1495 aaKnown RBP0.86□□□□□ -2.27
COPS3-213ENST00000577210 LAMB2P55268 1798 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 RFX7Q2KHR2 1363 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 XIRP1Q702N8 1843 aaKnown RBP0.85□□□□□ -2.27
COPS3-213ENST00000577210 TRAV23DV6A0A075B6W5 121 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 JMJD7-PLA2G4BH0Y9G9 81 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 SMIM24O75264 130 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 CD14P08571 375 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 SCTP09683 121 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 COX4I1P13073 169 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 CKS2P33552 79 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 LSM3P62310 102 aaKnown RBP0.85□□□□□ -2.27
COPS3-213ENST00000577210 S100A12P80511 92 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 SARNPP82979 210 aaKnown RBP0.85□□□□□ -2.27
COPS3-213ENST00000577210 MORN2Q502X0 79 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 GDF5OSQ5U4N7 250 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 KRTAP26-1Q6PEX3 210 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 HAGHLQ6PII5 290 aaPredicted RBP0.85□□□□□ -2.27
COPS3-213ENST00000577210 GLIPR1L1Q6UWM5 242 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 LINC00322Q6ZN03 302 aaPredicted RBP0.85□□□□□ -2.27
COPS3-213ENST00000577210 PSMF1Q92530 271 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 CIB3Q96Q77 187 aaPredicted RBP0.85□□□□□ -2.27
COPS3-213ENST00000577210 SLC35B3Q9H1N7 401 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 COMMD3Q9UBI1 195 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 BAZ2BQ9UIF8 2168 aaKnown RBP0.85□□□□□ -2.27
COPS3-213ENST00000577210 TNFSF18Q9UNG2 199 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 HEATR5BQ9P2D3 2071 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 EML6Q6ZMW3 1958 aa0.85□□□□□ -2.27
COPS3-213ENST00000577210 E9PCH4 1651 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.84□□□□□ -2.27
COPS3-213ENST00000577210 BICRAQ9NZM4 1560 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 CEP192Q8TEP8 1941 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 ARHGAP31Q2M1Z3 1444 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 LOC110117498A0A087WWA1 95 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 IGHV1-24A0A0C4DH33 117 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 BBIP1A8MTZ0 92 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 M0R2Z0 102 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 INE1O15225 51 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 NUPR1O60356 82 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 CD3DP04234 171 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 IL7P13232 177 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 HIST1H1BP16401 226 aaKnown RBP0.84□□□□□ -2.27
COPS3-213ENST00000577210 KDELR1P24390 212 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 ETV6P41212 452 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 CLLU1Q5K131 121 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 OR8J3Q8NGG0 315 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 OR10AG1Q8NH19 301 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 SMIM7Q9BQ49 75 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 C22orf24Q9Y442 160 aa0.84□□□□□ -2.27
COPS3-213ENST00000577210 PHRF1Q9P1Y6 1649 aaKnown RBP0.84□□□□□ -2.28
COPS3-213ENST00000577210 MYH10P35580 1976 aa0.84□□□□□ -2.28
COPS3-213ENST00000577210 TNRC6BQ9UPQ9 1833 aaKnown RBP0.83□□□□□ -2.28
COPS3-213ENST00000577210 FAM236AA0A1B0GUQ0 79 aa0.83□□□□□ -2.28
COPS3-213ENST00000577210 FAM236BA0A1B0GV22 79 aa0.83□□□□□ -2.28
COPS3-213ENST00000577210 K7ERU9 68 aa0.83□□□□□ -2.28
COPS3-213ENST00000577210 SULT1C4O75897 302 aa0.83□□□□□ -2.28
COPS3-213ENST00000577210 IQCJQ1A5X6 159 aa0.83□□□□□ -2.28
COPS3-213ENST00000577210 GLYATL3Q5SZD4 288 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms