RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 IGKV2D-40P01614 121 aaPredicted RBP13.13□□□□□ -0.31
CLDN7-208ENST00000575313 GOLT1AQ6ZVE7 132 aa13.13□□□□□ -0.31
CLDN7-208ENST00000575313 OR8A1Q8NGG7 326 aa13.13□□□□□ -0.31
CLDN7-208ENST00000575313 OR10J6PQ8NGY7 276 aa13.13□□□□□ -0.31
CLDN7-208ENST00000575313 HIST1H2BAQ96A08 127 aa13.13□□□□□ -0.31
CLDN7-208ENST00000575313 ATG101Q9BSB4 218 aa13.13□□□□□ -0.31
CLDN7-208ENST00000575313 MED9Q9NWA0 146 aa13.13□□□□□ -0.31
CLDN7-208ENST00000575313 COL7A1Q02388 2944 aa13.12□□□□□ -0.31
CLDN7-208ENST00000575313 SCO2A0A1W2PP80 73 aa13.12□□□□□ -0.31
CLDN7-208ENST00000575313 RAB19A4D1S5 217 aa13.12□□□□□ -0.31
CLDN7-208ENST00000575313 PDE6DO43924 150 aa13.12□□□□□ -0.31
CLDN7-208ENST00000575313 SRSF3P84103 164 aaKnown RBP13.12□□□□□ -0.31
CLDN7-208ENST00000575313 HIST1H1AQ02539 215 aaPredicted RBP13.12□□□□□ -0.31
CLDN7-208ENST00000575313 PEA15Q15121 130 aa13.12□□□□□ -0.31
CLDN7-208ENST00000575313 MORN3Q6PF18 240 aaPredicted RBP13.12□□□□□ -0.31
CLDN7-208ENST00000575313 CYB561D1Q8N8Q1 229 aa13.12□□□□□ -0.31
CLDN7-208ENST00000575313 SERTM2A0A1B0GWG4 89 aa13.11□□□□□ -0.31
CLDN7-208ENST00000575313 RBAKDNA6NC62 111 aa13.11□□□□□ -0.31
CLDN7-208ENST00000575313 LINC00862A6NCI5 91 aa13.11□□□□□ -0.31
CLDN7-208ENST00000575313 K7EQM0 130 aa13.11□□□□□ -0.31
CLDN7-208ENST00000575313 DUSP14O95147 198 aaKnown RBP13.11□□□□□ -0.31
CLDN7-208ENST00000575313 HLA-DRB4P13762 266 aa13.11□□□□□ -0.31
CLDN7-208ENST00000575313 ERCC8Q13216 396 aa13.11□□□□□ -0.31
CLDN7-208ENST00000575313 VGLL1Q99990 258 aa13.11□□□□□ -0.31
CLDN7-208ENST00000575313 TP53TG1Q9Y2A0 90 aa13.11□□□□□ -0.31
CLDN7-208ENST00000575313 HLA-DRB4X5D2U9 266 aa13.11□□□□□ -0.31
CLDN7-208ENST00000575313 NPIPB6E9PJ23 425 aa13.1□□□□□ -0.31
CLDN7-208ENST00000575313 H3BMM0 161 aa13.1□□□□□ -0.31
CLDN7-208ENST00000575313 CNN1P51911 297 aaKnown RBP13.1□□□□□ -0.31
CLDN7-208ENST00000575313 C9orf47Q6ZRZ4 202 aa13.1□□□□□ -0.31
CLDN7-208ENST00000575313 OR4B1Q8NGF8 309 aa13.1□□□□□ -0.31
CLDN7-208ENST00000575313 C11orf52Q96A22 123 aa13.1□□□□□ -0.31
CLDN7-208ENST00000575313 LINC00479Q96M42 142 aa13.1□□□□□ -0.31
CLDN7-208ENST00000575313 AGPAT4-IT1Q9H0P7 198 aa13.1□□□□□ -0.31
CLDN7-208ENST00000575313 RETNQ9HD89 108 aa13.1□□□□□ -0.31
CLDN7-208ENST00000575313 TRAV34A0A0B4J273 112 aa13.09□□□□□ -0.31
CLDN7-208ENST00000575313 TMEM250H0YL14 139 aa13.09□□□□□ -0.31
CLDN7-208ENST00000575313 NDUFS6O75380 124 aaKnown RBP13.09□□□□□ -0.31
CLDN7-208ENST00000575313 CA1P00915 261 aaPredicted RBP13.09□□□□□ -0.31
CLDN7-208ENST00000575313 IGKV3-20P01619 116 aa13.09□□□□□ -0.31
CLDN7-208ENST00000575313 SRP19P09132 144 aaKnown RBP13.09□□□□□ -0.31
CLDN7-208ENST00000575313 AKR1C3P42330 323 aa13.09□□□□□ -0.31
CLDN7-208ENST00000575313 NUTF2P61970 127 aaKnown RBP13.09□□□□□ -0.31
CLDN7-208ENST00000575313 TMEM78Q5T7P6 136 aa13.09□□□□□ -0.31
CLDN7-208ENST00000575313 COMMD7Q86VX2 200 aa13.09□□□□□ -0.31
CLDN7-208ENST00000575313 C2CD4CQ8TF44 421 aa13.09□□□□□ -0.31
CLDN7-208ENST00000575313 SGK494Q96LW2 274 aa13.09□□□□□ -0.31
CLDN7-208ENST00000575313 CLUHP3Q96NS8 147 aa13.09□□□□□ -0.31
CLDN7-208ENST00000575313 SMDT1Q9H4I9 107 aa13.09□□□□□ -0.31
CLDN7-208ENST00000575313 TREM1Q9NP99 234 aa13.09□□□□□ -0.31
CLDN7-208ENST00000575313 TRAV8-1A0A0A6YYK1 113 aa13.08□□□□□ -0.32
CLDN7-208ENST00000575313 C9JQL5 133 aa13.08□□□□□ -0.32
CLDN7-208ENST00000575313 SPRY2O43597 315 aa13.08□□□□□ -0.32
CLDN7-208ENST00000575313 DEFB135Q30KP9 77 aa13.08□□□□□ -0.32
CLDN7-208ENST00000575313 RNF183Q96D59 192 aa13.08□□□□□ -0.32
CLDN7-208ENST00000575313 LINC00477Q96M19 166 aa13.08□□□□□ -0.32
CLDN7-208ENST00000575313 OVOL2Q9BRP0 275 aa13.08□□□□□ -0.32
CLDN7-208ENST00000575313 KLF12Q9Y4X4 402 aa13.08□□□□□ -0.32
CLDN7-208ENST00000575313 IGLV2-11P01706 119 aa13.07□□□□□ -0.32
CLDN7-208ENST00000575313 CT45A10P0DMU9 189 aa13.07□□□□□ -0.32
CLDN7-208ENST00000575313 UBE2G1P62253 170 aa13.07□□□□□ -0.32
CLDN7-208ENST00000575313 FLI1Q01543 452 aaPredicted RBP13.07□□□□□ -0.32
CLDN7-208ENST00000575313 TMEM75Q8N9X5 138 aa13.07□□□□□ -0.32
CLDN7-208ENST00000575313 PSG8Q9UQ74 426 aa13.07□□□□□ -0.32
CLDN7-208ENST00000575313 HUWE1Q7Z6Z7 4374 aaKnown RBP13.06□□□□□ -0.32
CLDN7-208ENST00000575313 FBLL1A6NHQ2 334 aaKnown RBP13.06□□□□□ -0.32
CLDN7-208ENST00000575313 A8MTW9 85 aa13.06□□□□□ -0.32
CLDN7-208ENST00000575313 S100A9P06702 114 aaKnown RBP13.06□□□□□ -0.32
CLDN7-208ENST00000575313 ZNF138P52744 262 aa13.06□□□□□ -0.32
CLDN7-208ENST00000575313 CEBPGP53567 150 aa13.06□□□□□ -0.32
CLDN7-208ENST00000575313 FMC1Q96HJ9 113 aa13.06□□□□□ -0.32
CLDN7-208ENST00000575313 WWC2-AS2Q96NR7 200 aa13.06□□□□□ -0.32
CLDN7-208ENST00000575313 DERL1Q9BUN8 251 aa13.06□□□□□ -0.32
CLDN7-208ENST00000575313 C1QTNF4Q9BXJ3 329 aa13.06□□□□□ -0.32
CLDN7-208ENST00000575313 PPP1R14DQ9NXH3 145 aa13.06□□□□□ -0.32
CLDN7-208ENST00000575313 ZNF492Q9P255 531 aa13.06□□□□□ -0.32
CLDN7-208ENST00000575313 AGRNO00468 2067 aa13.06□□□□□ -0.32
CLDN7-208ENST00000575313 RPL35P42766 123 aaKnown RBP13.05□□□□□ -0.32
CLDN7-208ENST00000575313 TMEM183BQ1AE95 376 aa13.05□□□□□ -0.32
CLDN7-208ENST00000575313 AMTNQ6UX39 209 aa13.05□□□□□ -0.32
CLDN7-208ENST00000575313 PRNTQ86SH4 94 aa13.05□□□□□ -0.32
CLDN7-208ENST00000575313 Q8TAT8 98 aa13.05□□□□□ -0.32
CLDN7-208ENST00000575313 SLC35B3Q9H1N7 401 aa13.05□□□□□ -0.32
CLDN7-208ENST00000575313 STAB2Q8WWQ8 2551 aa13.05□□□□□ -0.32
CLDN7-208ENST00000575313 NBEAL2Q6ZNJ1 2754 aa13.04□□□□□ -0.32
CLDN7-208ENST00000575313 TRBV6-1A0A0K0K1D8 114 aa13.04□□□□□ -0.32
CLDN7-208ENST00000575313 GIG44P09565 113 aaPredicted RBP13.04□□□□□ -0.32
CLDN7-208ENST00000575313 TAS2R60P59551 318 aa13.04□□□□□ -0.32
CLDN7-208ENST00000575313 UQCC3Q6UW78 93 aa13.04□□□□□ -0.32
CLDN7-208ENST00000575313 EIF4E3Q8N5X7 224 aaKnown RBP13.04□□□□□ -0.32
CLDN7-208ENST00000575313 TENM3Q9P273 2699 aa13.04□□□□□ -0.32
CLDN7-208ENST00000575313 ZNF674Q2M3X9 581 aa13.03□□□□□ -0.32
CLDN7-208ENST00000575313 Q86TA4 180 aa13.03□□□□□ -0.32
CLDN7-208ENST00000575313 TVP23CQ96ET8 276 aa13.03□□□□□ -0.32
CLDN7-208ENST00000575313 ODF3Q96PU9 254 aa13.03□□□□□ -0.32
CLDN7-208ENST00000575313 PARLQ9H300 379 aa13.03□□□□□ -0.32
CLDN7-208ENST00000575313 LENEPQ9Y5L5 61 aa13.03□□□□□ -0.32
CLDN7-208ENST00000575313 LEPP41159 167 aa13.02□□□□□ -0.33
CLDN7-208ENST00000575313 FXYD7P58549 80 aa13.02□□□□□ -0.33
CLDN7-208ENST00000575313 FAM19A4Q96LR4 140 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms