RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 TMEM75Q8N9X5 138 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 TMEM190Q8WZ59 177 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 ZFHX3Q15911 3703 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 IGHV3-66A0A0C4DH42 116 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 LOC389332A0A1B0GUA5 103 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 ZNF207O43670 478 aaKnown RBP8.1□□□□□ -1.11
USP43-205ENST00000574408 TGFAP01135 160 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 BLCAPP62952 87 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 PSG9Q00887 426 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 IGFL4Q6B9Z1 124 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 PRSS22Q9GZN4 317 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 SMAD5-AS1Q9Y6J3 95 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 A0A096LNT2 108 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 IGHV3-49A0A0A0MS15 119 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 A8MWL6 223 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 HLA-DQA1P01909 254 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 CRIP2P52943 208 aaPredicted RBP8.1□□□□□ -1.11
USP43-205ENST00000574408 PSG3Q16557 428 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 MPV17L2Q567V2 206 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 C2CD3Q4AC94 2353 aa8.1□□□□□ -1.11
USP43-205ENST00000574408 OR4B1Q8NGF8 309 aa8.09□□□□□ -1.11
USP43-205ENST00000574408 TRBV6-1A0A0K0K1D8 114 aa8.09□□□□□ -1.11
USP43-205ENST00000574408 FAM223BA6NKX1 122 aa8.09□□□□□ -1.11
USP43-205ENST00000574408 ZNF785A8K8V0 405 aa8.09□□□□□ -1.11
USP43-205ENST00000574408 RNF223E7ERA6 249 aa8.09□□□□□ -1.11
USP43-205ENST00000574408 IGHG2P01859 326 aa8.09□□□□□ -1.11
USP43-205ENST00000574408 GPX1P07203 203 aa8.09□□□□□ -1.11
USP43-205ENST00000574408 Q6ZS46 218 aa8.09□□□□□ -1.11
USP43-205ENST00000574408 FAM223AQ8IWN6 122 aa8.09□□□□□ -1.11
USP43-205ENST00000574408 PGLYRP4Q96LB8 373 aa8.09□□□□□ -1.11
USP43-205ENST00000574408 ZFP30Q9Y2G7 519 aa8.09□□□□□ -1.11
USP43-205ENST00000574408 IGKV2-40A0A087WW87 121 aaPredicted RBP8.09□□□□□ -1.12
USP43-205ENST00000574408 CLPSL1A2RUU4 121 aa8.09□□□□□ -1.12
USP43-205ENST00000574408 BUB3O43684 328 aa8.09□□□□□ -1.12
USP43-205ENST00000574408 IGKV2D-40P01614 121 aaPredicted RBP8.09□□□□□ -1.12
USP43-205ENST00000574408 IGF1P05019 195 aa8.09□□□□□ -1.12
USP43-205ENST00000574408 ZANQ9Y493 2812 aa8.08□□□□□ -1.12
USP43-205ENST00000574408 HLA-DMBP28068 263 aa8.08□□□□□ -1.12
USP43-205ENST00000574408 CT83Q5H943 113 aa8.08□□□□□ -1.12
USP43-205ENST00000574408 GTSF1Q8WW33 167 aa8.08□□□□□ -1.12
USP43-205ENST00000574408 TP53TG3Q9ULZ0 132 aa8.08□□□□□ -1.12
USP43-205ENST00000574408 A0A1W2PS18 150 aa8.08□□□□□ -1.12
USP43-205ENST00000574408 CHEK1O14757 476 aa8.08□□□□□ -1.12
USP43-205ENST00000574408 METTL26Q96S19 204 aa8.08□□□□□ -1.12
USP43-205ENST00000574408 PF4V1P10720 104 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 RAB9AP51151 201 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 SLAQ13239 276 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 DEFB112Q30KQ8 113 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 GDF5OSQ5U4N7 250 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 AMMECR1LQ6DCA0 310 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 IGHV3-11P01762 117 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 APOHP02749 345 aaPredicted RBP8.07□□□□□ -1.12
USP43-205ENST00000574408 ARL3P36405 182 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 RPL24P83731 157 aaKnown RBP8.07□□□□□ -1.12
USP43-205ENST00000574408 RASL11AQ6T310 242 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 OR8A1Q8NGG7 326 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 WIPF2Q8TF74 440 aaPredicted RBP8.07□□□□□ -1.12
USP43-205ENST00000574408 KCNS1Q96KK3 526 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 C8orf49Q96NF6 230 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 A0A087X0K7 114 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 NPIPB6E9PJ23 425 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 ZNF324O75467 553 aaPredicted RBP8.07□□□□□ -1.12
USP43-205ENST00000574408 TRBV12-3P01733 135 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 IGHV4-59P01825 116 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 PPIFP30405 207 aaKnown RBP8.07□□□□□ -1.12
USP43-205ENST00000574408 LINC00310P59036 64 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 LCNL1Q6ZST4 164 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 KLK15Q9H2R5 256 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 TLN2Q9Y4G6 2542 aa8.07□□□□□ -1.12
USP43-205ENST00000574408 CT45A10P0DMU9 189 aa8.06□□□□□ -1.12
USP43-205ENST00000574408 Q5PR19 223 aa8.06□□□□□ -1.12
USP43-205ENST00000574408 SAPCD1Q5SSQ6 148 aa8.06□□□□□ -1.12
USP43-205ENST00000574408 FCER1GP30273 86 aa8.06□□□□□ -1.12
USP43-205ENST00000574408 Q0VG73 95 aa8.06□□□□□ -1.12
USP43-205ENST00000574408 DEFB113Q30KQ7 82 aa8.06□□□□□ -1.12
USP43-205ENST00000574408 RBPMS2Q6ZRY4 209 aaKnown RBP8.06□□□□□ -1.12
USP43-205ENST00000574408 ATP5L2Q7Z4Y8 100 aa8.06□□□□□ -1.12
USP43-205ENST00000574408 Q8TAT8 98 aa8.06□□□□□ -1.12
USP43-205ENST00000574408 CCDC168Q8NDH2 2452 aa8.06□□□□□ -1.12
USP43-205ENST00000574408 OR4C46A6NHA9 309 aa8.06□□□□□ -1.12
USP43-205ENST00000574408 J3QLI3 93 aa8.06□□□□□ -1.12
USP43-205ENST00000574408 IGHG4P01861 327 aa8.06□□□□□ -1.12
USP43-205ENST00000574408 LOXL1Q08397 574 aaPredicted RBP8.06□□□□□ -1.12
USP43-205ENST00000574408 TMEM95Q3KNT9 176 aa8.06□□□□□ -1.12
USP43-205ENST00000574408 A0A1B0GXF2 115 aa8.05□□□□□ -1.12
USP43-205ENST00000574408 TSPOP30536 169 aa8.05□□□□□ -1.12
USP43-205ENST00000574408 CRIP1P50238 77 aa8.05□□□□□ -1.12
USP43-205ENST00000574408 HBBP68871 147 aa8.05□□□□□ -1.12
USP43-205ENST00000574408 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.05□□□□□ -1.12
USP43-205ENST00000574408 RNF182Q8N6D2 247 aa8.05□□□□□ -1.12
USP43-205ENST00000574408 ATP6V0BQ99437 205 aa8.05□□□□□ -1.12
USP43-205ENST00000574408 VGLL1Q99990 258 aa8.05□□□□□ -1.12
USP43-205ENST00000574408 GFRA4Q9GZZ7 299 aa8.05□□□□□ -1.12
USP43-205ENST00000574408 CHD6Q8TD26 2715 aa8.05□□□□□ -1.12
USP43-205ENST00000574408 KIR2DL5BA0A0G2JN68 375 aa8.05□□□□□ -1.12
USP43-205ENST00000574408 KIR2DL5BA0A0G2JPC4 375 aa8.05□□□□□ -1.12
USP43-205ENST00000574408 IGLC3P0DOY3 106 aa8.05□□□□□ -1.12
USP43-205ENST00000574408 DNLZQ5SXM8 178 aa8.05□□□□□ -1.12
USP43-205ENST00000574408 LINC00173Q6ZV60 143 aa8.05□□□□□ -1.12
USP43-205ENST00000574408 KIR2DL5AQ8N109 375 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms