RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 CRISP2P16562 243 aa12.17□□□□□ -0.46
SMG6-212ENST00000573153 ICAM4Q14773 271 aa12.17□□□□□ -0.46
SMG6-212ENST00000573153 LINC00612Q8N6U2 182 aa12.17□□□□□ -0.46
SMG6-212ENST00000573153 SMIM3Q9BZL3 60 aa12.17□□□□□ -0.46
SMG6-212ENST00000573153 AGPAT4-IT1Q9H0P7 198 aa12.17□□□□□ -0.46
SMG6-212ENST00000573153 MED28Q9H204 178 aa12.17□□□□□ -0.46
SMG6-212ENST00000573153 TRBV7-9A0A0J9YWB2 115 aa12.16□□□□□ -0.46
SMG6-212ENST00000573153 CBY3A6NI87 242 aa12.16□□□□□ -0.46
SMG6-212ENST00000573153 RTL8CO15255 209 aa12.16□□□□□ -0.46
SMG6-212ENST00000573153 ERCC8Q13216 396 aa12.16□□□□□ -0.46
SMG6-212ENST00000573153 KHDC3LQ587J8 217 aa12.16□□□□□ -0.46
SMG6-212ENST00000573153 Q6ZR54 194 aa12.16□□□□□ -0.46
SMG6-212ENST00000573153 AQP10Q96PS8 301 aa12.16□□□□□ -0.46
SMG6-212ENST00000573153 PYGO2Q9BRQ0 406 aa12.16□□□□□ -0.46
SMG6-212ENST00000573153 LINC00467Q9BRT7 94 aa12.16□□□□□ -0.46
SMG6-212ENST00000573153 OR7C2O60412 319 aa12.15□□□□□ -0.46
SMG6-212ENST00000573153 OR10J4P0C629 311 aa12.15□□□□□ -0.46
SMG6-212ENST00000573153 HTN3P15516 51 aa12.15□□□□□ -0.46
SMG6-212ENST00000573153 TAS2R45P59539 299 aa12.15□□□□□ -0.46
SMG6-212ENST00000573153 PHYHIPLQ96FC7 376 aa12.15□□□□□ -0.46
SMG6-212ENST00000573153 TRAV12-3A0A0B4J271 114 aa12.14□□□□□ -0.47
SMG6-212ENST00000573153 C7orf71A4D174 169 aa12.14□□□□□ -0.47
SMG6-212ENST00000573153 RBAKDNA6NC62 111 aa12.14□□□□□ -0.47
SMG6-212ENST00000573153 ZNF324O75467 553 aaPredicted RBP12.14□□□□□ -0.47
SMG6-212ENST00000573153 GIPP09681 153 aaPredicted RBP12.14□□□□□ -0.47
SMG6-212ENST00000573153 DEFB130BP0DP73 79 aa12.14□□□□□ -0.47
SMG6-212ENST00000573153 DEFB130AP0DP74 79 aa12.14□□□□□ -0.47
SMG6-212ENST00000573153 HTN1P15515 57 aa12.14□□□□□ -0.47
SMG6-212ENST00000573153 M6PRP20645 277 aa12.14□□□□□ -0.47
SMG6-212ENST00000573153 CCDC28AQ8IWP9 274 aa12.14□□□□□ -0.47
SMG6-212ENST00000573153 C15orf53Q8NAA6 179 aa12.14□□□□□ -0.47
SMG6-212ENST00000573153 ATP5G1P05496 136 aa12.13□□□□□ -0.47
SMG6-212ENST00000573153 ATP5G3P48201 142 aa12.13□□□□□ -0.47
SMG6-212ENST00000573153 UBE2L3P68036 154 aaKnown RBP12.13□□□□□ -0.47
SMG6-212ENST00000573153 ZNF266Q14584 549 aa12.13□□□□□ -0.47
SMG6-212ENST00000573153 ACOT6Q3I5F7 207 aaPredicted RBP12.13□□□□□ -0.47
SMG6-212ENST00000573153 RNF212Q495C1 297 aa12.13□□□□□ -0.47
SMG6-212ENST00000573153 TMEM78Q5T7P6 136 aa12.13□□□□□ -0.47
SMG6-212ENST00000573153 FAM122CQ6P4D5 195 aa12.13□□□□□ -0.47
SMG6-212ENST00000573153 ZFAND2AQ8N6M9 145 aa12.13□□□□□ -0.47
SMG6-212ENST00000573153 OR2G3Q8NGZ4 309 aa12.13□□□□□ -0.47
SMG6-212ENST00000573153 VGLL1Q99990 258 aa12.13□□□□□ -0.47
SMG6-212ENST00000573153 NOP10Q9NPE3 64 aaKnown RBP12.13□□□□□ -0.47
SMG6-212ENST00000573153 ZNF492Q9P255 531 aa12.13□□□□□ -0.47
SMG6-212ENST00000573153 RYR1P21817 5038 aa12.13□□□□□ -0.47
SMG6-212ENST00000573153 IGKV2-40A0A087WW87 121 aaPredicted RBP12.12□□□□□ -0.47
SMG6-212ENST00000573153 IGKV2D-40P01614 121 aaPredicted RBP12.12□□□□□ -0.47
SMG6-212ENST00000573153 DAZ2Q13117 558 aaKnown RBP12.12□□□□□ -0.47
SMG6-212ENST00000573153 LGALS9BQ3B8N2 356 aa12.12□□□□□ -0.47
SMG6-212ENST00000573153 ANXA2RQ3ZCQ2 193 aa12.12□□□□□ -0.47
SMG6-212ENST00000573153 PQLC2Q6ZP29 291 aa12.12□□□□□ -0.47
SMG6-212ENST00000573153 ARL6IP6Q8N6S5 226 aa12.12□□□□□ -0.47
SMG6-212ENST00000573153 Q9H3A6 140 aa12.12□□□□□ -0.47
SMG6-212ENST00000573153 J3KRW8 73 aa12.11□□□□□ -0.47
SMG6-212ENST00000573153 ZNF138P52744 262 aa12.11□□□□□ -0.47
SMG6-212ENST00000573153 CD300CQ08708 224 aa12.11□□□□□ -0.47
SMG6-212ENST00000573153 PRR9Q5T870 116 aa12.11□□□□□ -0.47
SMG6-212ENST00000573153 ZNF680Q8NEM1 530 aa12.11□□□□□ -0.47
SMG6-212ENST00000573153 PSMG3Q9BT73 122 aaPredicted RBP12.11□□□□□ -0.47
SMG6-212ENST00000573153 SNURFLB1AK76 121 aa12.1□□□□□ -0.47
SMG6-212ENST00000573153 CSN1S1P47710 185 aa12.1□□□□□ -0.47
SMG6-212ENST00000573153 FAM3BP58499 235 aaPredicted RBP12.1□□□□□ -0.47
SMG6-212ENST00000573153 RANP62826 216 aaKnown RBP12.1□□□□□ -0.47
SMG6-212ENST00000573153 BTN1A1Q13410 526 aa12.1□□□□□ -0.47
SMG6-212ENST00000573153 Q5BKY6 102 aa12.1□□□□□ -0.47
SMG6-212ENST00000573153 C11orf72Q8NBR9 251 aa12.1□□□□□ -0.47
SMG6-212ENST00000573153 RXFP4Q8TDU9 374 aa12.1□□□□□ -0.47
SMG6-212ENST00000573153 TMED6Q8WW62 240 aa12.1□□□□□ -0.47
SMG6-212ENST00000573153 LENEPQ9Y5L5 61 aa12.1□□□□□ -0.47
SMG6-212ENST00000573153 F5H768 121 aa12.09□□□□□ -0.47
SMG6-212ENST00000573153 M0R2N4 97 aa12.09□□□□□ -0.47
SMG6-212ENST00000573153 GPX1P07203 203 aa12.09□□□□□ -0.47
SMG6-212ENST00000573153 RAB2AP61019 212 aa12.09□□□□□ -0.47
SMG6-212ENST00000573153 RGS21Q2M5E4 152 aa12.09□□□□□ -0.47
SMG6-212ENST00000573153 Q6ZQT7 251 aa12.09□□□□□ -0.47
SMG6-212ENST00000573153 EIF4E3Q8N5X7 224 aaKnown RBP12.09□□□□□ -0.47
SMG6-212ENST00000573153 C18orf15Q96N68 181 aa12.09□□□□□ -0.47
SMG6-212ENST00000573153 OTORQ9NRC9 128 aa12.09□□□□□ -0.47
SMG6-212ENST00000573153 IGLV2-18A0A075B6J9 118 aa12.08□□□□□ -0.48
SMG6-212ENST00000573153 A0A1W2PPV4 95 aa12.08□□□□□ -0.48
SMG6-212ENST00000573153 DIRC3C9JPN6 131 aa12.08□□□□□ -0.48
SMG6-212ENST00000573153 HOXA5P20719 270 aa12.08□□□□□ -0.48
SMG6-212ENST00000573153 RNASE4P34096 147 aaKnown RBP12.08□□□□□ -0.48
SMG6-212ENST00000573153 SERF2P84101 59 aa12.08□□□□□ -0.48
SMG6-212ENST00000573153 IBA57Q5T440 356 aaKnown RBP12.08□□□□□ -0.48
SMG6-212ENST00000573153 LINC00336Q6ZUF6 198 aa12.08□□□□□ -0.48
SMG6-212ENST00000573153 OR10G4Q8NGN3 311 aa12.08□□□□□ -0.48
SMG6-212ENST00000573153 OR10G9Q8NGN4 311 aa12.08□□□□□ -0.48
SMG6-212ENST00000573153 OR10G7Q8NGN6 311 aa12.08□□□□□ -0.48
SMG6-212ENST00000573153 RNF222A6NCQ9 220 aa12.07□□□□□ -0.48
SMG6-212ENST00000573153 HSD17B11Q8NBQ5 300 aa12.07□□□□□ -0.48
SMG6-212ENST00000573153 SUN5Q8TC36 379 aa12.07□□□□□ -0.48
SMG6-212ENST00000573153 TNFSF18Q9UNG2 199 aa12.07□□□□□ -0.48
SMG6-212ENST00000573153 PCLOQ9Y6V0 5065 aa12.07□□□□□ -0.48
SMG6-212ENST00000573153 EIF3GO75821 320 aaKnown RBP eCLIP12.06□□□□□ -0.48
SMG6-212ENST00000573153 MBP02144 154 aa12.06□□□□□ -0.48
SMG6-212ENST00000573153 STAG3L2P0CL84 134 aa12.06□□□□□ -0.48
SMG6-212ENST00000573153 STAG3L3P0CL85 134 aa12.06□□□□□ -0.48
SMG6-212ENST00000573153 ATP6V0CP27449 155 aa12.06□□□□□ -0.48
SMG6-212ENST00000573153 TCL1AP56279 114 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms