RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 IGKV2D-30A0A075B6S6 120 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 A0A087X0K7 114 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 C9orf170A2RU37 121 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 ZNF705GA8MUZ8 300 aaPredicted RBP6.51□□□□□ -1.37
CIITA-208ENST00000572665 F5H768 121 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 M0R2Z0 102 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 GOSR2O14653 212 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 OR4E1P0C645 316 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 DEFB130BP0DP73 79 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 DEFB130AP0DP74 79 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 GATA2P23769 480 aaPredicted RBP6.51□□□□□ -1.37
CIITA-208ENST00000572665 TAS2R60P59551 318 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 DLK1P80370 383 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 HIST1H1AQ02539 215 aaPredicted RBP6.51□□□□□ -1.37
CIITA-208ENST00000572665 KRTAP5-3Q6L8H2 238 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 LCN15Q6UWW0 184 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 OR8A1Q8NGG7 326 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 OR10J6PQ8NGY7 276 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 SMIM8Q96KF7 97 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 C20orf144Q9BQM9 153 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 SLC50A1Q9BRV3 221 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 NUDT15Q9NV35 164 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 TIMM8BQ9Y5J9 83 aaPredicted RBP6.51□□□□□ -1.37
CIITA-208ENST00000572665 DNAH6Q9C0G6 4158 aa6.51□□□□□ -1.37
CIITA-208ENST00000572665 HECTD4Q9Y4D8 3996 aa6.5□□□□□ -1.37
CIITA-208ENST00000572665 NACAE9PAV3 2078 aa6.5□□□□□ -1.37
CIITA-208ENST00000572665 FAM240BA0A1B0GVZ2 78 aa6.5□□□□□ -1.37
CIITA-208ENST00000572665 CRXO43186 299 aaPredicted RBP6.5□□□□□ -1.37
CIITA-208ENST00000572665 SSSCA1O60232 199 aa6.5□□□□□ -1.37
CIITA-208ENST00000572665 CDKN1BP46527 198 aa6.5□□□□□ -1.37
CIITA-208ENST00000572665 TAS2R30P59541 319 aa6.5□□□□□ -1.37
CIITA-208ENST00000572665 POLR2GP62487 172 aaKnown RBP eCLIP6.5□□□□□ -1.37
CIITA-208ENST00000572665 RAB31Q13636 194 aa6.5□□□□□ -1.37
CIITA-208ENST00000572665 CLINT1Q14677 625 aa6.5□□□□□ -1.37
CIITA-208ENST00000572665 PSG3Q16557 428 aa6.5□□□□□ -1.37
CIITA-208ENST00000572665 NRARPQ7Z6K4 114 aa6.5□□□□□ -1.37
CIITA-208ENST00000572665 ZNF546Q86UE3 836 aa6.5□□□□□ -1.37
CIITA-208ENST00000572665 BPIFA4PQ86YQ2 179 aa6.5□□□□□ -1.37
CIITA-208ENST00000572665 RNF182Q8N6D2 247 aa6.5□□□□□ -1.37
CIITA-208ENST00000572665 GGACTQ9BVM4 153 aa6.5□□□□□ -1.37
CIITA-208ENST00000572665 ARL6Q9H0F7 186 aa6.5□□□□□ -1.37
CIITA-208ENST00000572665 TRAV8-2A0A0B4J237 113 aa6.49□□□□□ -1.37
CIITA-208ENST00000572665 PRAC2D3DTV9 90 aa6.49□□□□□ -1.37
CIITA-208ENST00000572665 H7BYZ3 331 aa6.49□□□□□ -1.37
CIITA-208ENST00000572665 K7EPK0 472 aa6.49□□□□□ -1.37
CIITA-208ENST00000572665 TSC22D2O75157 780 aa6.49□□□□□ -1.37
CIITA-208ENST00000572665 CXCL3P19876 107 aa6.49□□□□□ -1.37
CIITA-208ENST00000572665 DEFA1P59665 94 aa6.49□□□□□ -1.37
CIITA-208ENST00000572665 DEFA3P59666 94 aa6.49□□□□□ -1.37
CIITA-208ENST00000572665 BAP18Q8IXM2 172 aa6.49□□□□□ -1.37
CIITA-208ENST00000572665 TMEM263Q8WUH6 116 aaKnown RBP6.49□□□□□ -1.37
CIITA-208ENST00000572665 MITD1Q8WV92 249 aa6.49□□□□□ -1.37
CIITA-208ENST00000572665 RPUSD4Q96CM3 377 aaKnown RBP6.49□□□□□ -1.37
CIITA-208ENST00000572665 ARV1Q9H2C2 271 aa6.49□□□□□ -1.37
CIITA-208ENST00000572665 TRAV12-2A0A075B6T6 113 aa6.48□□□□□ -1.37
CIITA-208ENST00000572665 TRAV6A0A075B6T7 132 aa6.48□□□□□ -1.37
CIITA-208ENST00000572665 L7N2F9 121 aa6.48□□□□□ -1.37
CIITA-208ENST00000572665 COX7A2P2O60397 106 aa6.48□□□□□ -1.37
CIITA-208ENST00000572665 METTL15P1P0C7V9 234 aa6.48□□□□□ -1.37
CIITA-208ENST00000572665 HTN1P15515 57 aa6.48□□□□□ -1.37
CIITA-208ENST00000572665 RRAS2P62070 204 aaPredicted RBP6.48□□□□□ -1.37
CIITA-208ENST00000572665 TTC32Q5I0X7 151 aa6.48□□□□□ -1.37
CIITA-208ENST00000572665 TMEM14EPQ6UXP3 125 aa6.48□□□□□ -1.37
CIITA-208ENST00000572665 TMEM182Q6ZP80 229 aaPredicted RBP6.48□□□□□ -1.37
CIITA-208ENST00000572665 Q6ZRG5 221 aa6.48□□□□□ -1.37
CIITA-208ENST00000572665 LINC00305Q7Z4B0 112 aa6.48□□□□□ -1.37
CIITA-208ENST00000572665 C6orf223Q8N319 242 aa6.48□□□□□ -1.37
CIITA-208ENST00000572665 ENKURQ8TC29 256 aa6.48□□□□□ -1.37
CIITA-208ENST00000572665 MARVELD1Q9BSK0 173 aa6.48□□□□□ -1.37
CIITA-208ENST00000572665 PXMP4Q9Y6I8 212 aa6.48□□□□□ -1.37
CIITA-208ENST00000572665 MUC4Q99102 2169 aa6.47□□□□□ -1.37
CIITA-208ENST00000572665 NBDYA0A0U1RRE5 68 aa6.47□□□□□ -1.37
CIITA-208ENST00000572665 PMS2P5A8MQ11 134 aa6.47□□□□□ -1.37
CIITA-208ENST00000572665 SNURFLB1AK76 121 aa6.47□□□□□ -1.37
CIITA-208ENST00000572665 PTTG1O95997 202 aa6.47□□□□□ -1.37
CIITA-208ENST00000572665 RLN2P04090 185 aa6.47□□□□□ -1.37
CIITA-208ENST00000572665 RPL24P83731 157 aaKnown RBP6.47□□□□□ -1.37
CIITA-208ENST00000572665 PNRC1Q12796 327 aaPredicted RBP6.47□□□□□ -1.37
CIITA-208ENST00000572665 GUK1Q16774 197 aa6.47□□□□□ -1.37
CIITA-208ENST00000572665 IAH1Q2TAA2 248 aaPredicted RBP6.47□□□□□ -1.37
CIITA-208ENST00000572665 ZNF431Q8TF32 576 aaPredicted RBP6.47□□□□□ -1.37
CIITA-208ENST00000572665 C17orf77Q96MU5 243 aa6.47□□□□□ -1.37
CIITA-208ENST00000572665 UHRF2Q96PU4 802 aa6.47□□□□□ -1.37
CIITA-208ENST00000572665 PFDN5Q99471 154 aa6.47□□□□□ -1.37
CIITA-208ENST00000572665 ZNF331Q9NQX6 463 aaPredicted RBP6.47□□□□□ -1.37
CIITA-208ENST00000572665 GSKIPQ9P0R6 139 aa6.47□□□□□ -1.37
CIITA-208ENST00000572665 C16orf90A8MZG2 172 aa6.46□□□□□ -1.38
CIITA-208ENST00000572665 AGPAT2O15120 278 aa6.46□□□□□ -1.38
CIITA-208ENST00000572665 PVALBP20472 110 aaPredicted RBP6.46□□□□□ -1.38
CIITA-208ENST00000572665 M6PRP20645 277 aa6.46□□□□□ -1.38
CIITA-208ENST00000572665 SLC38A11Q08AI6 406 aa6.46□□□□□ -1.38
CIITA-208ENST00000572665 C10orf113Q5VZT2 155 aa6.46□□□□□ -1.38
CIITA-208ENST00000572665 CST9LP1Q5W188 147 aa6.46□□□□□ -1.38
CIITA-208ENST00000572665 C12orf45Q8N5I9 185 aaPredicted RBP6.46□□□□□ -1.38
CIITA-208ENST00000572665 OR1L4Q8NGR5 311 aa6.46□□□□□ -1.38
CIITA-208ENST00000572665 ZNRF2Q8NHG8 242 aa6.46□□□□□ -1.38
CIITA-208ENST00000572665 GNPNAT1Q96EK6 184 aaPredicted RBP6.46□□□□□ -1.38
CIITA-208ENST00000572665 SEC22CQ9BRL7 303 aa6.46□□□□□ -1.38
CIITA-208ENST00000572665 NOP10Q9NPE3 64 aaKnown RBP6.46□□□□□ -1.38
CIITA-208ENST00000572665 DNAH10Q8IVF4 4471 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms