RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 MPDU1O75352 247 aa13.35□□□□□ -0.27
CCDC40-206ENST00000572083 CRYGDP07320 174 aa13.35□□□□□ -0.27
CCDC40-206ENST00000572083 SRIP30626 198 aa13.35□□□□□ -0.27
CCDC40-206ENST00000572083 GUK1Q16774 197 aa13.35□□□□□ -0.27
CCDC40-206ENST00000572083 Q6ZQT7 251 aa13.35□□□□□ -0.27
CCDC40-206ENST00000572083 FAM19A4Q96LR4 140 aa13.35□□□□□ -0.27
CCDC40-206ENST00000572083 LRP1Q07954 4544 aaKnown RBP13.35□□□□□ -0.27
CCDC40-206ENST00000572083 K7EP13 123 aa13.34□□□□□ -0.27
CCDC40-206ENST00000572083 PSCAO43653 123 aa13.34□□□□□ -0.27
CCDC40-206ENST00000572083 C4orf46Q504U0 113 aa13.34□□□□□ -0.27
CCDC40-206ENST00000572083 PRR9Q5T870 116 aa13.34□□□□□ -0.27
CCDC40-206ENST00000572083 NTN5Q8WTR8 489 aaPredicted RBP13.34□□□□□ -0.27
CCDC40-206ENST00000572083 C9orf170A2RU37 121 aa13.33□□□□□ -0.28
CCDC40-206ENST00000572083 LRCOL1A6NCL2 159 aa13.33□□□□□ -0.28
CCDC40-206ENST00000572083 KRTAP29-1A8MX34 341 aaPredicted RBP13.33□□□□□ -0.28
CCDC40-206ENST00000572083 RGS13O14921 159 aa13.33□□□□□ -0.28
CCDC40-206ENST00000572083 GPX1P07203 203 aa13.33□□□□□ -0.28
CCDC40-206ENST00000572083 SFTA3P0C7M3 94 aa13.33□□□□□ -0.28
CCDC40-206ENST00000572083 PYDC2Q56P42 97 aa13.33□□□□□ -0.28
CCDC40-206ENST00000572083 RAB2BQ8WUD1 216 aa13.33□□□□□ -0.28
CCDC40-206ENST00000572083 MRPL53Q96EL3 112 aaKnown RBP13.33□□□□□ -0.28
CCDC40-206ENST00000572083 MRPL32Q9BYC8 188 aaKnown RBP13.33□□□□□ -0.28
CCDC40-206ENST00000572083 SLIRPQ9GZT3 109 aaKnown RBP13.33□□□□□ -0.28
CCDC40-206ENST00000572083 AGPAT4-IT1Q9H0P7 198 aa13.33□□□□□ -0.28
CCDC40-206ENST00000572083 DNAJC4Q9NNZ3 241 aa13.33□□□□□ -0.28
CCDC40-206ENST00000572083 TRGV4A0A0C4DH28 118 aa13.32□□□□□ -0.28
CCDC40-206ENST00000572083 TSC22D2O75157 780 aa13.32□□□□□ -0.28
CCDC40-206ENST00000572083 ZNF415Q09FC8 603 aa13.32□□□□□ -0.28
CCDC40-206ENST00000572083 MIC13Q5XKP0 118 aa13.32□□□□□ -0.28
CCDC40-206ENST00000572083 PCNPQ8WW12 178 aaKnown RBP13.32□□□□□ -0.28
CCDC40-206ENST00000572083 ARPC5LQ9BPX5 153 aa13.32□□□□□ -0.28
CCDC40-206ENST00000572083 RCL1Q9Y2P8 373 aaKnown RBP13.32□□□□□ -0.28
CCDC40-206ENST00000572083 IGHV1OR15-1A0A075B7D0 117 aa13.31□□□□□ -0.28
CCDC40-206ENST00000572083 ZNF253O75346 499 aa13.31□□□□□ -0.28
CCDC40-206ENST00000572083 GYPEP15421 78 aa13.31□□□□□ -0.28
CCDC40-206ENST00000572083 CAMLGP49069 296 aa13.31□□□□□ -0.28
CCDC40-206ENST00000572083 C10orf126Q8N4M7 172 aa13.31□□□□□ -0.28
CCDC40-206ENST00000572083 LINC00477Q96M19 166 aa13.31□□□□□ -0.28
CCDC40-206ENST00000572083 TRBV19A0A075B6N1 114 aa13.3□□□□□ -0.28
CCDC40-206ENST00000572083 PLA2G1BP04054 148 aaKnown RBP13.3□□□□□ -0.28
CCDC40-206ENST00000572083 CRISP2P16562 243 aa13.3□□□□□ -0.28
CCDC40-206ENST00000572083 TAS2R30P59541 319 aa13.3□□□□□ -0.28
CCDC40-206ENST00000572083 UBE2MP61081 183 aaKnown RBP13.3□□□□□ -0.28
CCDC40-206ENST00000572083 Q6ZRG5 221 aa13.3□□□□□ -0.28
CCDC40-206ENST00000572083 NRARPQ7Z6K4 114 aa13.3□□□□□ -0.28
CCDC40-206ENST00000572083 Q8N814 137 aa13.3□□□□□ -0.28
CCDC40-206ENST00000572083 ZNF479Q96JC4 524 aa13.3□□□□□ -0.28
CCDC40-206ENST00000572083 GGACTQ9BVM4 153 aa13.3□□□□□ -0.28
CCDC40-206ENST00000572083 MRPS26Q9BYN8 205 aaKnown RBP13.3□□□□□ -0.28
CCDC40-206ENST00000572083 IGKV2-40A0A087WW87 121 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-206ENST00000572083 NDUFB4O95168 129 aa13.29□□□□□ -0.28
CCDC40-206ENST00000572083 IGKV2D-40P01614 121 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-206ENST00000572083 IAH1Q2TAA2 248 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-206ENST00000572083 LINC00528Q8N1L1 170 aa13.29□□□□□ -0.28
CCDC40-206ENST00000572083 EXOC3-AS1Q8N2X6 119 aa13.29□□□□□ -0.28
CCDC40-206ENST00000572083 ZFAND2AQ8N6M9 145 aa13.29□□□□□ -0.28
CCDC40-206ENST00000572083 OR1L4Q8NGR5 311 aa13.29□□□□□ -0.28
CCDC40-206ENST00000572083 FAT3Q8TDW7 4589 aa13.29□□□□□ -0.28
CCDC40-206ENST00000572083 C7orf66A4D0T2 115 aa13.28□□□□□ -0.28
CCDC40-206ENST00000572083 GSKIPQ9P0R6 139 aa13.28□□□□□ -0.28
CCDC40-206ENST00000572083 V9GYH0 126 aa13.28□□□□□ -0.28
CCDC40-206ENST00000572083 TMEM78Q5T7P6 136 aa13.27□□□□□ -0.29
CCDC40-206ENST00000572083 C9orf47Q6ZRZ4 202 aa13.27□□□□□ -0.29
CCDC40-206ENST00000572083 BLNKQ8WV28 456 aa13.27□□□□□ -0.29
CCDC40-206ENST00000572083 PFDN5Q99471 154 aa13.27□□□□□ -0.29
CCDC40-206ENST00000572083 Q9HAA7 133 aa13.27□□□□□ -0.29
CCDC40-206ENST00000572083 FLVCR2Q9UPI3 526 aa13.27□□□□□ -0.29
CCDC40-206ENST00000572083 PRELID1Q9Y255 219 aa13.27□□□□□ -0.29
CCDC40-206ENST00000572083 TIMM9Q9Y5J7 89 aa13.27□□□□□ -0.29
CCDC40-206ENST00000572083 ORM1P02763 201 aa13.26□□□□□ -0.29
CCDC40-206ENST00000572083 PYYP10082 97 aa13.26□□□□□ -0.29
CCDC40-206ENST00000572083 RAB31Q13636 194 aa13.26□□□□□ -0.29
CCDC40-206ENST00000572083 SERTAD4-AS1Q5TG53 156 aa13.26□□□□□ -0.29
CCDC40-206ENST00000572083 DEFB104AQ8WTQ1 72 aa13.26□□□□□ -0.29
CCDC40-206ENST00000572083 DEDD2Q8WXF8 326 aa13.26□□□□□ -0.29
CCDC40-206ENST00000572083 TXNDC17Q9BRA2 123 aa13.26□□□□□ -0.29
CCDC40-206ENST00000572083 SRRQ9GZT4 340 aa13.26□□□□□ -0.29
CCDC40-206ENST00000572083 MBPP02686 304 aaPredicted RBP13.25□□□□□ -0.29
CCDC40-206ENST00000572083 NMBP08949 121 aa13.25□□□□□ -0.29
CCDC40-206ENST00000572083 MUC21Q5SSG8 566 aa13.25□□□□□ -0.29
CCDC40-206ENST00000572083 FAM122CQ6P4D5 195 aa13.25□□□□□ -0.29
CCDC40-206ENST00000572083 IQCF2Q8IXL9 164 aa13.25□□□□□ -0.29
CCDC40-206ENST00000572083 OR10G4Q8NGN3 311 aa13.25□□□□□ -0.29
CCDC40-206ENST00000572083 IGHV3-38A0A0C4DH36 116 aa13.24□□□□□ -0.29
CCDC40-206ENST00000572083 LOC100131303A0A0U1RQF7 123 aa13.24□□□□□ -0.29
CCDC40-206ENST00000572083 C9JCJ5 164 aa13.24□□□□□ -0.29
CCDC40-206ENST00000572083 HIST1H1EP10412 219 aaKnown RBP13.24□□□□□ -0.29
CCDC40-206ENST00000572083 TMBIM6P55061 237 aa13.24□□□□□ -0.29
CCDC40-206ENST00000572083 PDE6HQ13956 83 aa13.24□□□□□ -0.29
CCDC40-206ENST00000572083 SYT8Q8NBV8 401 aa13.24□□□□□ -0.29
CCDC40-206ENST00000572083 Q8TAT8 98 aa13.24□□□□□ -0.29
CCDC40-206ENST00000572083 SLC39A9Q9NUM3 307 aa13.24□□□□□ -0.29
CCDC40-206ENST00000572083 CST7O76096 145 aa13.23□□□□□ -0.29
CCDC40-206ENST00000572083 C1QBP02746 253 aa13.23□□□□□ -0.29
CCDC40-206ENST00000572083 C12orf45Q8N5I9 185 aaPredicted RBP13.23□□□□□ -0.29
CCDC40-206ENST00000572083 BCL7BQ9BQE9 202 aa13.23□□□□□ -0.29
CCDC40-206ENST00000572083 AAMDCQ9H7C9 122 aa13.23□□□□□ -0.29
CCDC40-206ENST00000572083 UQCC1Q9NVA1 299 aa13.23□□□□□ -0.29
CCDC40-206ENST00000572083 TMEM14CQ9P0S9 112 aa13.23□□□□□ -0.29
CCDC40-206ENST00000572083 ZNF492Q9P255 531 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms