RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 FCN2Q15485 313 aa6.83□□□□□ -1.32
CIITA-207ENST00000571545 ANXA2RQ3ZCQ2 193 aa6.83□□□□□ -1.32
CIITA-207ENST00000571545 LYPD1Q8N2G4 141 aa6.83□□□□□ -1.32
CIITA-207ENST00000571545 THAP6Q8TBB0 222 aa6.83□□□□□ -1.32
CIITA-207ENST00000571545 BLNKQ8WV28 456 aa6.83□□□□□ -1.32
CIITA-207ENST00000571545 RNF141Q8WVD5 230 aa6.83□□□□□ -1.32
CIITA-207ENST00000571545 C18orf15Q96N68 181 aa6.83□□□□□ -1.32
CIITA-207ENST00000571545 TRGV2A0A075B6R0 118 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 GAGE12BA1L429 117 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 INMT-MINDY4F8WBC2 141 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 J3KRW8 73 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 RGS13O14921 159 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 GAGE7O76087 117 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 NDUFB4O95168 129 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 IFNA5P01569 189 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 GPX1P07203 203 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 NBEAP1P0C6P0 100 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 GAGE12FP0CL80 117 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 GAGE12GP0CL81 117 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 GAGE12IP0CL82 117 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 PYYP10082 97 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 CRISP2P16562 243 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 TAS2R45P59539 299 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 OR5I1Q13606 314 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 LRRC37A5PQ49AS3 106 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 KHDC3LQ587J8 217 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 IBA57Q5T440 356 aaKnown RBP6.82□□□□□ -1.32
CIITA-207ENST00000571545 C9orf47Q6ZRZ4 202 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 C6orf223Q8N319 242 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 EIF4E3Q8N5X7 224 aaKnown RBP6.82□□□□□ -1.32
CIITA-207ENST00000571545 ZNRF2Q8NHG8 242 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 ATP5SQ99766 215 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 PAXXQ9BUH6 204 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 SLC25A2Q9BXI2 301 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 PARD6GQ9BYG4 376 aaPredicted RBP6.82□□□□□ -1.32
CIITA-207ENST00000571545 WDR61Q9GZS3 305 aaKnown RBP6.82□□□□□ -1.32
CIITA-207ENST00000571545 OR51M1Q9H341 326 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 FUT9Q9Y231 359 aa6.82□□□□□ -1.32
CIITA-207ENST00000571545 TRAV26-1A0A087WT03 109 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 A0A1W2PPQ1 181 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 RBAKDNA6NC62 111 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 M0R3E3 92 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 SSNA1O43805 119 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 OR7C2O60412 319 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 NHLH2Q02577 135 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 ICAM4Q14773 271 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 KIR3DS1Q14943 382 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 FAM74A1Q5RGS3 127 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 SSX7Q7RTT5 188 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 SCGB1C1Q8TD33 95 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 PPP1R1CQ8WVI7 109 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 FAM19A4Q96LR4 140 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 ARPC5LQ9BPX5 153 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 MARVELD1Q9BSK0 173 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 UPK3BQ9BT76 320 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 LENEPQ9Y5L5 61 aa6.81□□□□□ -1.32
CIITA-207ENST00000571545 SIX6O95475 246 aa6.8□□□□□ -1.32
CIITA-207ENST00000571545 RNASE4P34096 147 aaKnown RBP6.8□□□□□ -1.32
CIITA-207ENST00000571545 ZNF138P52744 262 aa6.8□□□□□ -1.32
CIITA-207ENST00000571545 TCL1AP56279 114 aa6.8□□□□□ -1.32
CIITA-207ENST00000571545 UBE2L3P68036 154 aaKnown RBP6.8□□□□□ -1.32
CIITA-207ENST00000571545 SLAQ13239 276 aa6.8□□□□□ -1.32
CIITA-207ENST00000571545 GCSAMLQ5JQS6 135 aa6.8□□□□□ -1.32
CIITA-207ENST00000571545 FAM122CQ6P4D5 195 aa6.8□□□□□ -1.32
CIITA-207ENST00000571545 MIR17HGQ75NE6 70 aa6.8□□□□□ -1.32
CIITA-207ENST00000571545 EXOC3-AS1Q8N2X6 119 aa6.8□□□□□ -1.32
CIITA-207ENST00000571545 AGPAT4-IT1Q9H0P7 198 aa6.8□□□□□ -1.32
CIITA-207ENST00000571545 TMPRSS5Q9H3S3 457 aa6.8□□□□□ -1.32
CIITA-207ENST00000571545 OR5AC2Q9NZP5 309 aa6.8□□□□□ -1.32
CIITA-207ENST00000571545 ZNF492Q9P255 531 aa6.8□□□□□ -1.32
CIITA-207ENST00000571545 LINC00588Q9Y4M8 146 aa6.8□□□□□ -1.32
CIITA-207ENST00000571545 HSPB11Q9Y547 144 aa6.8□□□□□ -1.32
CIITA-207ENST00000571545 HECTD4Q9Y4D8 3996 aa6.79□□□□□ -1.32
CIITA-207ENST00000571545 DNAH6Q9C0G6 4158 aa6.79□□□□□ -1.32
CIITA-207ENST00000571545 IGKV2-40A0A087WW87 121 aaPredicted RBP6.79□□□□□ -1.32
CIITA-207ENST00000571545 TRGV1A0A0A0MS02 117 aa6.79□□□□□ -1.32
CIITA-207ENST00000571545 ZNF324O75467 553 aaPredicted RBP6.79□□□□□ -1.32
CIITA-207ENST00000571545 MPC2O95563 127 aa6.79□□□□□ -1.32
CIITA-207ENST00000571545 IGKV2D-40P01614 121 aaPredicted RBP6.79□□□□□ -1.32
CIITA-207ENST00000571545 OR10J4P0C629 311 aa6.79□□□□□ -1.32
CIITA-207ENST00000571545 PRB4P10163 310 aaPredicted RBP6.79□□□□□ -1.32
CIITA-207ENST00000571545 ZNF415Q09FC8 603 aa6.79□□□□□ -1.32
CIITA-207ENST00000571545 ERCC8Q13216 396 aa6.79□□□□□ -1.32
CIITA-207ENST00000571545 BTN1A1Q13410 526 aa6.79□□□□□ -1.32
CIITA-207ENST00000571545 C11orf72Q8NBR9 251 aa6.79□□□□□ -1.32
CIITA-207ENST00000571545 FAM167A-AS1Q96KT0 104 aa6.79□□□□□ -1.32
CIITA-207ENST00000571545 Q9H3A6 140 aa6.79□□□□□ -1.32
CIITA-207ENST00000571545 Q9H8V8 135 aa6.79□□□□□ -1.32
CIITA-207ENST00000571545 MRPS16Q9Y3D3 137 aaKnown RBP6.79□□□□□ -1.32
CIITA-207ENST00000571545 IGHV1OR15-1A0A075B7D0 117 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 A0A0J9YY99 117 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 SPINK4O60575 86 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 RPL12P30050 165 aaKnown RBP6.78□□□□□ -1.32
CIITA-207ENST00000571545 H2BFSP57053 126 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 CD300CQ08708 224 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 ACOT6Q3I5F7 207 aaPredicted RBP6.78□□□□□ -1.32
CIITA-207ENST00000571545 FFAR4Q5NUL3 377 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 PQLC2Q6ZP29 291 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 Q6ZTI0 123 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 ZFAND2AQ8N6M9 145 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms